Chlorobaculum limnaeum: BIU88_09885
Help
Entry
BIU88_09885 CDS
T04492
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
clz
Chlorobaculum limnaeum
Pathway
clz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BIU88_09885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clz03400
]
BIU88_09885
Enzymes [BR:
clz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
BIU88_09885
DNA repair and recombination proteins [BR:
clz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BIU88_09885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AOS84411
UniProt:
A0A1D8D1Y0
LinkDB
All DBs
Position
2196707..2197903
Genome browser
AA seq
398 aa
AA seq
DB search
MTETAQSVGELTRAIKNELESLFPYVRVKGELSNVKLHSSGHVYLTLKDSEAQIPAVIWK
SVRARSPLELRDGLEVVAEGRLEVYPPAGRYQLICTALFESGEGEQRLALERLIAKLAKA
GWFDAERKKPIPRIPRRIGMITSPTGAVIRDMSDVFARRFPAAELLLYPVQVQGDRAVES
IVRALDYFNDPANPKHKPDVLIVARGGGSSEDLHAFNTEAVAEAIYRSKIPVISAIGHET
DLSVADMVADLRAGTPSIAAERAAPDREELLRLIDGLRQRQSILMDGMISGAQLQVDSIT
SSYAFNRPVQMLGQFEERLALTEKELKRAIADKLRDREQQLTAAADRLAMLDTQRVLKRG
FALVTQDNRYITSAATLEAGAEIALTFHDGRREARVGG
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaccgcacaaagcgttggcgagctgacccgcgccatcaagaacgagctggag
agcctttttccctacgtgcgggtgaagggcgagctatcgaacgtcaagctgcacagctcg
ggccacgtctacctgacgctcaaggacagcgaggcgcagattccggcggtgatctggaaa
agcgtgcgcgcccgctctccgctggagctgcgcgacggcctcgaagtggtcgccgagggg
cgcctggaggtctatccgcccgccgggcgctaccagctcatctgcacggcgctcttcgag
agcggcgagggcgagcagcgactcgcactcgaacggctcatcgccaaactcgccaaggcg
gggtggtttgacgccgagcgcaaaaagccgatcccgcgcattccgcgacgcatcggcatg
atcacttcgcccaccggcgcggtgatccgcgacatgagcgacgtcttcgcgcggcgcttt
ccggcggcggagctgctgctctacccggtgcaggtgcagggcgatcgggccgtcgagtcg
atcgtgcgcgcgctcgactacttcaacgaccccgccaatccgaagcacaagcccgacgtg
ctgatcgtggcgcgaggcggcggctcgtcggaagacctgcacgccttcaacaccgaagcg
gtggccgaagcgatctaccgctcgaaaatcccggtcatcagcgccatcggccacgaaacc
gacctttcggtggccgacatggtggccgacctccgcgctggaacgccctccatcgccgcc
gaacgcgccgcacccgaccgcgaggagctgctgcgcctgatcgacggactgaggcaacgg
caatcgatcttgatggatggaatgatttcgggagcgcaactccaggtggactccatcacc
agcagctacgccttcaaccgcccggtgcagatgctcggccagttcgaggagcgcctggcg
ctgacggaaaaagagctgaagcgagccatcgccgacaaactccgcgaccgcgagcagcag
ctcaccgccgccgccgaccgcctcgcgatgctcgacacgcagcgagtgctgaaacgcggc
ttcgcgctggtaacgcaggacaaccgctacatcacctcagccgcgacgcttgaagcgggg
gcggagatcgcgctcacgttccatgacggacggcgcgaggcgcgggttggggggtag
DBGET
integrated database retrieval system
