Chlorobaculum limnaeum: BIU88_10305
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Entry
BIU88_10305 CDS
T04492
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
clz
Chlorobaculum limnaeum
Pathway
clz03420
Nucleotide excision repair
clz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BIU88_10305
03430 Mismatch repair
BIU88_10305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clz03400
]
BIU88_10305
Enzymes [BR:
clz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BIU88_10305
DNA repair and recombination proteins [BR:
clz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BIU88_10305
MMR (mismatch excision repair)
Other MMR factors
BIU88_10305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AOS84489
UniProt:
A0A1D8D9C1
LinkDB
All DBs
Position
2278948..2280981
Genome browser
AA seq
677 aa
AA seq
DB search
MPQEIKITNEEIQYAEQLLLPIGKTFDAERRDFIRNFNTIDLQAVPGGGKTTALLAKLLI
LERKLPFGTGSGILVLSHTNAAIDEIKEKIQAYCPRLFSYPNFIGTIQSFVDIFLAIPFY
ISKYKKKPIRIDNEIYDEKIKACVDKIWLHRFNLSNDTNKKVAHIKNNNEGLFYDVRFQF
SNGIRLVKKLNGDVLEIKKPRGNARNYCDYSQQEKQEVCRWFLEFKKTILKSGILHFDDA
YFLADVYLNKIPGIKTILQKRFAFVFVDEMQDMDTHQYNLLENIFYDEGNSVSKIQRIGD
KNQAIYNSVKATDIWQDRPEILRLNGSQRLSKPIADIVKKFALYNDDTFDIVGRNECTIK
PHILVFENDTIEKIIPLFAQIVRKNNLANSEKPIKVVCWNTEWSDDADLQDTTKLRLEDY
YKGFKKEKGKPKQDYDNLKSYLLYYEKKQTLESLRKNILNAFLKILRLENINTTDDRSYT
KKKLIDFIYNTDVQKYDELNLNLYKWSIGITQEKTNEVWSSIKAYTPTLLAIFNKTISES
LDFINNASRDMRVEKTENLALTNHYIEDGLKIEITSVHAVKGQTHCATLYLESFYKKGYG
NYESERLRNQFVGAQTVTETLATVKNSHDLIKQSTKMAYVGFSRPTDLLCIAVHKERFEK
LLSDINRDEWEIIEVKK
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgccacaggagattaaaataacaaatgaagaaattcaatatgcagagcaattgcttttg
cctattggtaagacgtttgatgcagagcgaagagattttattcggaatttcaatacaata
gatttacaagctgttccagggggtggaaaaacaacagctttacttgcaaagttgctgatt
ttagaacgtaaactcccatttggcaccggttcaggtattttggttttatcgcacaccaat
gcagccattgatgagataaaagagaaaattcaagcgtattgcccgagactattttcatat
ccaaattttattggaacaatacagagttttgttgacatttttttagctattccgttttat
atttcaaagtataagaaaaaaccaatacggatagataatgagatttacgacgaaaagata
aaagcttgtgttgacaaaatttggttacatagatttaacttaagtaatgatactaataag
aaagttgctcatatcaaaaataacaatgaggggttgttttatgacgtcagatttcagttt
tcaaatggaattaggttagttaaaaagttaaacggtgatgttctggaaatcaaaaaacca
cgaggaaatgcccgaaattattgtgattattcacagcaggaaaaacaggaagtgtgtaga
tggtttctagaatttaaaaaaacaatattaaaatcaggtattttacactttgatgatgct
tattttttagctgatgtttatttgaataaaatacccgggataaaaactattttgcaaaaa
cgcttcgcttttgtttttgtagatgaaatgcaggatatggacacgcatcagtacaatttg
ctggaaaacattttttatgatgagggaaacagtgtttcaaaaattcaaagaattggtgat
aaaaatcaagcaatctataattcagtaaaagcaacagatatttggcaagacagaccagaa
attttaagacttaacggaagtcagcgattaagtaaaccaatcgcagatatagtgaaaaaa
tttgccttgtacaacgatgatacatttgatattgtcggacgaaatgaatgtaccataaaa
ccgcatattttggtttttgaaaatgacacaattgaaaaaatcattcccctttttgctcaa
attgtaagaaaaaataatttagccaattctgaaaagccgatcaaagttgtttgctggaat
acagagtggagtgacgatgctgatctccaagataccacgaaactgcgtttagaagactat
tacaaaggcttcaaaaaagaaaaaggaaaaccaaagcaagattacgataacctgaaaagt
tatttgttgtactacgagaaaaagcaaaccttagaatctttgcgtaagaatatattgaac
gctttccttaaaattttgcgtttggaaaatatcaatacaacagacgacagatcttacaca
aagaaaaagttgattgactttatttacaacacagacgttcagaagtatgatgaattgaat
ttgaatctttacaagtggtcaatcggaataactcaagaaaaaactaacgaagtttggagc
agtataaaagcatatacacctactctgcttgcaatttttaataaaaccatttcagaaagt
ttagattttatcaataatgccagcagggatatgcgggtcgaaaaaaccgaaaatttagca
ttaacaaatcattacatagaggacggacttaaaattgagattacaagcgttcatgcagta
aaagggcaaacgcattgtgcgacattatatttggaatcattttataaaaaaggatatggg
aactatgaatctgagcgactacgaaatcagtttgttggagcacaaacggtaacagaaaca
ttggctactgtcaaaaatagtcatgacttaataaagcaatcaacgaaaatggcttacgtt
ggtttctctcgcccaacagatttgctttgtattgcagtacataaggaaagattcgaaaaa
ttactgagtgatataaatagagacgagtgggaaataatagaagttaaaaaatga
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