Chlorobaculum limnaeum: BIU88_11345
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Entry
BIU88_11345 CDS
T04492
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
clz
Chlorobaculum limnaeum
Brite
KEGG Orthology (KO) [BR:
clz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clz03032
]
BIU88_11345
03400 DNA repair and recombination proteins [BR:
clz03400
]
BIU88_11345
Enzymes [BR:
clz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BIU88_11345
DNA replication proteins [BR:
clz03032
]
Prokaryotic type
DNA Topoisomerases
BIU88_11345
DNA repair and recombination proteins [BR:
clz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BIU88_11345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AOS84673
UniProt:
A0A1D8D2Z8
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All DBs
Position
2515344..2517287
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AA seq
647 aa
AA seq
DB search
MQETDIQTAPNASADYLATNIQVLDGIEHVRKRPAMYIGDIHSRGLHHLVYEIVDNSIDE
TLGGFNDYIHVAMNPDGSVTVTDRGRGIPVDIHPVKKKSALELVMTVIGAGGKFDKGAYK
VSGGLHGVGASVVNALSEWCEVEVYRDGKVFMQTYRRGVPQGDVKEIGVTDKRGTKVSFK
PDHEIFKTTEFRKDIIIDRMRELAFLNSNLRIIVQDTEGVEETFHFEGGLKEFVRFTDSN
RLSLLKEPIFLSGERDSTMVEIALQYNDSYQENVFSYVNNINTHEGGTHVTGFRKALTRT
LNAYAQKNDLLKNVKITLTGDDFKEGLTAVISVKVPEPQFEGQTKTKLGNSETQSIVETI
VNEQLAEFAESNPGTLKLIIEKVKGAAISREAARKAKELTRRKSVLESSGLPGKLADCSI
NDPEHCELYIVEGDSAGGSAKQGRDRSFQAILPLKGKILNVEKARLHKMLENEEIKTIIL
ALGTSIGEEEFSPEKLRYGKIIIMTDADVDGAHIRTLLLTFFFRYMRSLIEAGKVFIAQP
PLYLVKSGREQQYAWDEDERASVTEQMKKLQKGKANVSIQRYKGLGEMNPEQLWSTTMDP
EHRSLLQVTVENAMEADQVFSTLMGDKVEPRRDFIEKNARYVRRLDV
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaccgatattcagaccgcgccgaacgcctccgccgattacctggccaccaac
atccaggtgctcgacggcatcgagcatgtccgcaaacgtccggccatgtacattggcgac
attcacagccgcggcctgcaccatctcgtgtatgagatcgtggacaactcgatcgacgaa
acgctcggcgggttcaacgactacatccatgtcgccatgaaccccgacggctcggtgacg
gtcaccgaccgcggacgcggcattccggtcgatattcatccggtcaagaagaagtcggcg
ctcgaactggtcatgacggtcatcggcgcgggcggcaagttcgacaagggggcctacaag
gtctccggcggtctgcacggcgtcggcgcttcggtggtcaacgccctttccgagtggtgc
gaagtcgaggtctatcgcgacggcaaggttttcatgcagacataccgccggggcgttccc
cagggcgatgtcaaggaaatcggcgtcacggacaagcggggcacgaaggtctccttcaag
cccgaccacgaaatcttcaagaccaccgagttccgcaaggacatcatcatcgaccgcatg
agggagctggcattcctgaacagcaacctccgcatcatcgtgcaggataccgaaggggtc
gaagaaaccttccacttcgagggcggcctgaaggagttcgtgcgcttcaccgactccaac
cgcctcagccttctcaaggagccgatcttcctgtctggcgagcgcgattcgacgatggtc
gagatcgccttgcagtacaacgactcctaccaggagaacgttttcagctacgtcaacaac
atcaacacgcacgaaggcggcacgcacgtcaccggcttccgcaaggcgctgacccgtacg
ctcaacgcctacgcgcagaagaacgacctgctcaagaacgtcaagatcaccctcaccggc
gacgacttcaaggagggcctcactgccgtaatctcagtgaaagtgccggagccgcagttc
gaggggcagaccaagaccaagctcggcaactccgagacgcagagcatcgtcgagaccatc
gtcaacgagcagctcgccgagttcgccgagagcaatcccggaaccctgaagctcatcatc
gaaaaggtgaaaggcgcggccatctcgcgtgaggcggctcgcaaggccaaggagctgacc
cgacgcaagtcggtgctcgaaagctccggcctgcccggcaagctcgccgactgctcgatc
aacgatcccgagcattgcgagctgtacatcgtcgagggcgactcggcaggcggcagcgcc
aagcaggggcgcgaccggagcttccaggcgatcctgccgctgaagggtaaaatcctgaac
gtcgagaaggcgcgcctgcacaagatgctcgaaaacgaggagatcaagaccatcatcctg
gcgctcggcaccagcatcggcgaggaggagttctcgcccgaaaagctgcgctacggcaag
atcatcatcatgaccgatgccgacgttgacggtgcgcacatccgcacgctgctgctcacc
ttcttcttccgctacatgcgctcgctcatcgaggcgggcaaggtgttcatcgcccagccg
ccgctctacctggtcaagtctggccgcgagcagcagtacgcctgggacgaggacgagcgg
gcgagcgtcacggagcagatgaagaagcttcaaaagggcaaggccaacgtgtcgatccag
cgctacaagggtctcggtgaaatgaaccccgagcagctctggagcaccacgatggatccg
gagcaccgctccctgttgcaggtcacggtggaaaacgcgatggaggccgaccaggtcttt
tcaaccctcatgggtgacaaggtcgaaccccgccgcgactttatcgagaaaaatgcccgc
tatgtcagacgcttagatgtctga
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