Chlorobaculum limnaeum: BIU88_11360
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Entry
BIU88_11360 CDS
T04492
Name
(GenBank) protein-export membrane protein SecD
KO
K12257
SecD/SecF fusion protein
Organism
clz
Chlorobaculum limnaeum
Pathway
clz02024
Quorum sensing
clz03060
Protein export
clz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
clz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
BIU88_11360
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
BIU88_11360
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BIU88_11360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
clz02044
]
BIU88_11360
Secretion system [BR:
clz02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
BIU88_11360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecDF_P1_head
SecD_1st
SecD_SecF_C
MMPL
Sec_GG
ACR_tran
Emaravirus_P4
Motif
Other DBs
NCBI-ProteinID:
AOS84676
UniProt:
A0A1D8D0F2
LinkDB
All DBs
Position
complement(2519796..2521640)
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AA seq
614 aa
AA seq
DB search
MKNNRFKLILIAVVALVSVWSIWPTYRDYALTQKLKSIRSAEDSLKFAIDNREAIEQAKD
KSLKLGLDLRGGMHLVMEVDILDLVEQKAWNKDATFTRVMESVKKESAAESNANIVELVA
AGFKKENIKLSRYFYDMRDSDQEIVSKLNGEAKDALARAKEIIRNRIDQYGVAEPVIQTQ
GSQRLVIELSGVTDEARVRRLLMGTAKLEFKLVKDPETLLRAIQRVSGAPLVAPAAPAAP
AVTAPADSSMAAAPVAAALQPAAAGVKKLSDVIGMMPNGQVFTPEYARDQVTAVLNRPDV
LALLPQDTQLLLAAKPELTAKGEKYFPIYLVQKTPELTGGVITEAKATFSAQDNQPEASM
SMNDEGTSKWARITGANIGKQIAIVLDGAVYSAPVVQSRIPSGNSVINGIGSLEEAKDLE
IILKAGALPAPVRILEERTVGPSLGADYIRAGLFSLVWGFTAVAIFMIVYYNKAGIAADL
ALVLNILVVISVLAGFSAALTLPGIAGIVLTMGMAVDANVLIYERVREELGEGKSLRMAI
DAGYNRAFSSILDSHVTTLAAAFLLYVYGVGPIQGFAVTLMIGTAASLFTAIVVTRVLFD
LLLGSKFMNEKSFG
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacaaccgctttaaactcattctcattgccgtggtcgcgctggtgtcggtgtgg
tcgatctggccgacttaccgtgactatgccctgacacaaaaactcaagagtatccgttct
gccgaagacagcctgaagttcgccatcgataatcgcgaggcaatcgagcaggccaaagac
aaaagcctgaagctcggtctcgatcttcgcggcggtatgcacctggtgatggaggtcgat
attctcgacctcgtcgagcagaaggcctggaacaaggatgcgaccttcacccgcgtgatg
gagtccgtcaaaaaagagtccgccgccgagtccaatgccaatatcgtcgagcttgtggct
gccgggttcaaaaaggagaatatcaagctcagccgttacttctatgacatgcgcgattcc
gatcaggagatcgtcagcaagctgaacggcgaggccaaggatgctttggcgcgggcgaag
gagatcatccgcaaccgtatcgaccagtatggcgtggccgagccggtcatccagactcag
ggttcgcagcggctggttatcgagctgtcgggcgttaccgacgaggcgagggttcgccgc
ctcctgatgggcacggcgaaactcgaattcaagctggtcaaggatcccgaaacgctgctc
cgcgccattcagcgcgtcagtggcgcgccgctcgtcgctcctgcggccccggctgctccc
gccgtcaccgctccggccgactcctcgatggccgccgctccggttgccgccgctctccag
cctgccgctgccggagtcaaaaagctttcggatgtgatcggcatgatgccaaacggacag
gtgttcactcccgagtatgcccgcgaccaggtcacggcggtgctgaaccggcctgacgtg
ctggccctgctgccgcaggacacgcaactgcttctggcggcaaagcccgagctgacggcg
aagggtgaaaagtacttcccgatctatctcgtccagaaaaccccggaactgaccggtggc
gtgattaccgaggcgaaggcgaccttcagcgcgcaggataatcagccagaggcttccatg
tcgatgaacgacgagggcacgtcgaaatgggcgcgaatcaccggcgccaacatcggcaag
cagatcgctatcgtgctcgatggcgcggtctacagcgcgccggtcgtgcagtcgaggatt
ccgagcggcaattcggtgatcaacggcattggcagcctcgaagaggccaaagacctcgaa
atcatcctgaaggcgggtgcgctgcccgcgccagtgcggattctcgaagagcgcacggtc
ggtccgtcgcttggcgccgactacatacgggccggtctgttttcgctggtctggggcttc
accgcggtggccatcttcatgattgtctattataacaaggcgggtattgccgccgacctg
gcgctggtgctcaacattctggtcgtcatctcggtgcttgccggattcagcgctgccctg
accttgcccggtatcgccggtatcgtgctcacgatgggcatggccgttgacgccaacgtg
ctgatttacgagcgcgtccgcgaggagcttggcgagggcaagagccttcgcatggctatc
gacgccgggtacaaccgcgccttctcgtcgattctcgactctcacgtcacgacgctcgcc
gcagcttttctgctctatgtttacggtgtcgggccgatccagggatttgctgttaccctc
atgatcggtaccgccgcgagcctgtttacggctattgtggtcaccagggtgctgttcgac
ctgttgctcggcagcaagttcatgaatgaaaagagtttcggataa
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