Chlorobaculum limnaeum: BIU88_11630
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Entry
BIU88_11630 CDS
T04492
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
clz
Chlorobaculum limnaeum
Brite
KEGG Orthology (KO) [BR:
clz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clz03016
]
BIU88_11630
Transfer RNA biogenesis [BR:
clz03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
BIU88_11630
Prokaryotic type
Methyltransferases
BIU88_11630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
ABC_ATPase
Arf
Dynamin_N
GTP_EFTU
ABC_tran
Ras
AIG1
AAA_29
SRPRB
Roc
Motif
Other DBs
NCBI-ProteinID:
AOS84726
UniProt:
A0A1D8D0K3
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All DBs
Position
complement(2571854..2573275)
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AA seq
473 aa
AA seq
DB search
MSSSDLHLPVPGHPIAAIATPVGVGALAIVRISGAGVLDIADRVFRKAHGSDKLAAAAGY
TAHFGRLHDGEEMVDEVIALVFRSPRSFTAEEMVEFTCHGGPVVVGRVLRLMLDHGCRLA
EPGEFTRRAFLNGRIDLLQAEAIGEMIHARTESAYRTAVSQMKGDLSKRLGELREQLIRS
CALIELELDFGEEEVEFQSRAELTAQVETLRGEVNRLIDSYQHGRLVSEGVSTVIAGKPN
AGKSTLLNMLLGQERAIVSHMPGTTRDYIEECFIHDKTMFRLTDTAGLREAGEEIEHEGI
RRSRMKMAEADLILYMLDLGAERLDDEIREIRELKAAHPDAKFLAIANKLDRADNADALI
RAIAEGTGTEVIGISALKGDGIDTLKQHMGDLVKNLDKLHEASVLVTSLRHYEALRNASD
ALQNALELIAHESETELIAFELRSALDYVGEITGKVVNEEVLNTIFDRFCIGK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcctccgatcttcacttgcccgttcccggccaccccatcgccgccatcgccacg
ccggttggcgtcggggcgctcgccatcgtgcgcatcagcggcgcgggggtgctcgacatc
gccgaccgcgtcttccgcaaggcgcacggcagcgacaagctcgccgccgccgccggttac
acggcgcacttcgggcgactccacgacggcgaggagatggtcgatgaggtgatcgcgctc
gtttttcgctcgccgcgctccttcaccgccgaggagatggtggagttcacctgccacggc
gggccggtggtggtggggcgtgtgctgcggctcatgctcgaccacggctgccgcctcgcc
gagccgggcgagttcacccgccgcgccttcctcaacgggcgcatcgacctgttgcaggcc
gaggcgatcggcgagatgatccacgcccgcactgaatcggcctaccgcacggcggtgagc
cagatgaagggcgacctgtcgaagcggctcggcgagttgcgcgagcagctcatccgctcc
tgcgctctcatcgaactcgaactcgacttcggcgaggaggaggtcgagttccagagccgc
gccgaactgaccgcgcaagtcgaaacgctgcggggtgaagtcaaccggctcatcgactcc
taccagcacgggcggctcgtcagcgaaggggtctcgacggtcatcgccggtaagccgaac
gccggtaagtccacgctgctcaacatgttactcggtcaggagcgcgccatcgtcagccac
atgcccggcacgacgcgcgactacattgaggagtgcttcatccacgacaagacgatgttc
cgcctcaccgacactgccggcctgcgtgaagcgggcgaggagatcgagcacgaaggcatc
cgccgcagccgcatgaagatggccgaagccgacctcattctctatatgctcgacctcggc
gcggagcggctcgacgacgaaatccgcgaaattcgcgagctgaaggcggcccatcccgac
gcgaagttcctcgccatcgccaacaagctcgaccgtgccgacaacgccgacgcgcttatc
cgcgccatcgcggagggcaccggcaccgaagtcatcggcatctcggcgctgaagggcgac
ggcatcgacacgctcaagcagcacatgggcgatctcgtcaaaaacctcgacaaactgcac
gaagcgagcgtactcgtcaccagcctgcgccactacgaagcattgcgcaacgcctcggac
gccctgcaaaacgccctcgaactcatcgcccacgagtcggaaaccgaactcatcgccttc
gaactccgcagcgccctcgactacgtcggcgaaatcaccggcaaggtggtgaatgaggag
gtgctgaacacgattttcgatcgattctgcatcgggaagtga
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