Caldivirga maquilingensis: Cmaq_0155
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Entry
Cmaq_0155 CDS
T00611
Name
(GenBank) putative rRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cma
Caldivirga maquilingensis
Brite
KEGG Orthology (KO) [BR:
cma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cma03016
]
Cmaq_0155
Enzymes [BR:
cma01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Cmaq_0155
Transfer RNA biogenesis [BR:
cma03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Cmaq_0155
Prokaryotic type
Cmaq_0155
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
ABW01004
UniProt:
A8MA72
LinkDB
All DBs
Position
complement(181704..182711)
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AA seq
335 aa
AA seq
DB search
MFNVLNCSGERIIKVKVDEGTDPRYGVNPYERRIEEYINYGFIILDKPRGPTSSEVVAWV
KKLLNISKAGHSGTLDPGVSGVLPIALGDSTKVLQGISNVDKEYVGVMLLHSTVDQERVK
AVFREFTGKIYQRPPLKSAVKRRIRVKTVYSLDIMEFDGRYVLFKADVESGTYIRKLCYD
IGEVLGVGASMRELRRTRVGCFREENTVNLNTLREAYSLWRDYGDESLLRRLIRPVEEMV
IHLPRIYIRDSAVDAIAHGASLAAPGVAKVEEGIRSGQLVALMTLKGELVALAESTASTN
EILNMNRGIVAKPTRVIMPRGVYPSTWRRTSKQAT
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgtacttaactgtagtggtgaaaggatcattaaggttaaggtggatgagggt
actgacccaaggtatggtgttaatccttatgaaagaaggattgaggagtacattaactac
ggtttcataatccttgataaaccaagggggccgactagtagtgaggttgttgcatgggtt
aagaagctgcttaatatcagtaaggctgggcactctggtacacttgatccaggggtttct
ggggttctcccaatagctctgggtgattcaactaaggtattgcaaggtataagtaatgtt
gataaggagtacgtgggtgttatgctccttcactctactgtggatcaggagagggttaag
gctgtcttcagggagttcacgggtaaaatatatcaacgcccacccctcaagagtgctgtt
aagaggaggattagggttaagacggtttatagcctggatataatggaattcgacggtagg
tacgttttgtttaaggctgatgttgagtcagggacttacattaggaaactatgctacgat
attggtgaggttttaggtgttggtgcaagcatgagggagttaaggaggactagggtcggt
tgcttcagggaggagaatacagttaacttgaatacgttaagggaagcttactcactttgg
agggattacggtgatgaatcactgcttaggaggttaattaggcctgttgaggaaatggtg
attcacctacctagaatctacattagggactccgcagtggatgcaatagcccacggtgca
tcactggcggcaccgggggttgctaaggttgaggagggtattaggagtggtcaattagta
gccttaatgacgcttaagggtgagttagtggcgttggctgaatccactgcctcaactaat
gagatacttaacatgaatagggggattgtagctaagccaactagggttattatgcctagg
ggtgtttatccatcaacctggaggagaaccagtaagcaggccacgtag
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