Caldivirga maquilingensis: Cmaq_0348
Help
Entry
Cmaq_0348 CDS
T00611
Name
(GenBank) tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
cma
Caldivirga maquilingensis
Brite
KEGG Orthology (KO) [BR:
cma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cma03016
]
Cmaq_0348
Enzymes [BR:
cma01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Cmaq_0348
Transfer RNA biogenesis [BR:
cma03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Cmaq_0348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
TSEN34_N
Motif
Other DBs
NCBI-ProteinID:
ABW01194
UniProt:
A8MBA4
LinkDB
All DBs
Position
complement(389053..389631)
Genome browser
AA seq
192 aa
AA seq
DB search
MAQGARGRTIAKYRGVLKGDKVIIPSIDESRALYKLGFFGKFLGKDKIKIEEVDSVDSPL
HLSPLEALYLVELGLLEVVDNGSVVGRGTLKEFVEGRYEHGELVYELYKYFRDRGYVVRS
GLKFGSLYAVYEKGPGIDHAPMLVHLIDPGRNITALDVTRAARLSHTVRKTFVLAVKHMN
SLKLIGFEWWTP
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atggctcagggtgctagagggaggactattgctaagtataggggggtacttaagggtgat
aaggttattatacctagtattgatgaatccagggcactctataagcttggcttcttcggt
aaattcctaggtaaggataagattaagattgaggaagttgattcagtggattccccacta
cacctgtcgccgcttgaggcgctttacctagttgaattaggtctactggaggttgttgat
aatggttcagtggtgggtaggggtacccttaaggagtttgtggaggggaggtatgagcat
ggggaattggtttacgaattatacaagtactttagggataggggttacgtggttaggagt
ggtttaaaattcggttcactatacgcagtttatgagaaggggcctggtattgatcatgca
ccaatgctggttcacttaattgaccctggacgcaacataactgcactggatgttaccagg
gcggctaggttgagtcatacggttaggaaaaccttcgtattggctgttaagcatatgaat
agtcttaagttaatagggttcgagtggtggaccccgtag
DBGET
integrated database retrieval system
