Caldivirga maquilingensis: Cmaq_0366
Help
Entry
Cmaq_0366 CDS
T00611
Name
(GenBank) KH type 1 domain protein
KO
K03679
exosome complex component RRP4
Organism
cma
Caldivirga maquilingensis
Pathway
cma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cmaq_0366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cma03019
]
Cmaq_0366
Messenger RNA biogenesis [BR:
cma03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Cmaq_0366
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
Cmaq_0366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_6
S1_RRP4
ECR1_N_2
KH_1
RRP40_S1
KH_2
OB_RNR_2nd
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
ABW01212
UniProt:
A8MBC2
LinkDB
All DBs
Position
403204..403926
Genome browser
AA seq
240 aa
AA seq
DB search
MLNVTDRMIVLPGDLIGGRSNDYVIVGSVYWEGDKAYASTVAMINIKGDVKPMEVQVIPL
NGAYKPRQGDIVIGYVIDILVNGWEIDIKSPYSAYLPINEATLKPVDVVTADLRNILNIG
DIVLAKISDFNLAKDYPVTLTIKESRLGRIEDGTVIEIDPVKVPRVIGKRGSMVNMFKDE
LNCDVTVGQNGRIWVRCRNKRDELFVSQTIKFIEKESHQSGLMDKVKAIIQNYKSTSGLP
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcttaacgttactgataggatgatagtgctgcctggggatttaattggtgggaggagt
aatgattacgtcatagttgggtcagtgtactgggagggtgataaggcgtacgcctcaaca
gtagctatgattaatattaagggtgacgtgaagccaatggaggttcaagtaataccactg
aatggagcctataagccgaggcagggggatatagtgataggctacgtaatagatatactg
gttaacgggtgggagattgacattaagtccccgtactcggcctacttacccattaatgaa
gccacattgaagcctgttgatgtcgtcaccgcagatttaagaaacatacttaacataggt
gatattgttctcgctaaaataagcgacttcaatctagctaaggattacccagtgacatta
accataaaggaatctaggctaggtaggattgaggatgggactgttattgaaatagaccca
gttaaagtacccagggttatagggaagaggggatctatggtgaatatgtttaaggatgaa
cttaactgcgacgtaacggtgggccagaatggtaggatatgggttaggtgtaggaataaa
cgtgatgaattattcgtatcacagactattaaattcattgagaaggagagtcatcaaagt
ggattaatggataaggttaaggcaataatacagaattataagtctacatcagggttaccg
taa
DBGET
integrated database retrieval system
