KEGG   Caldivirga maquilingensis: Cmaq_0509
Entry
Cmaq_0509         CDS       T00611                                 
Name
(GenBank) RNA binding S1 domain protein
  KO
K07573  exosome complex component CSL4
Organism
cma  Caldivirga maquilingensis
Pathway
cma03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cma00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Cmaq_0509
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cma03019]
    Cmaq_0509
Messenger RNA biogenesis [BR:cma03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     Cmaq_0509
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     Cmaq_0509
SSDB
Motif
Pfam: ECR1_N Zn_ribbon_FGT1_2 UPF0547 Auto_anti-p27 Cas12f1-like_TNB Zn_ribbon_6 Zn_Ribbon_TF ZNF512_C2HC IBR zf-C2H2
Other DBs
NCBI-ProteinID: ABW01354
UniProt: A8MC48
LinkDB
Position
complement(545346..545906)
AA seq 186 aa
MQGSSVSKALVTPGEELGVEEEYLPGDNAYVDSGYVKSMVLGIAEWDRVNHVVNVKPLKL
SLIRPGQIVYGKVYYFPNDKVAMVRIFAVQHQDGVRRIQAETGILYVTYASEERLSTIYD
AVGLGDLIKARVLSSKPPYHISLRGPLLGVVETRCPQCRAVIVPSTSSKITCPVCGFVFR
RKVAAS
NT seq 561 nt   +upstreamnt  +downstreamnt
atgcaggggtcttcagtaagtaaagccttagtcacacctggtgaggaattgggtgttgag
gaggagtatcttccaggcgataatgcgtacgttgattcaggctacgttaaatcaatggtt
cttggcattgctgagtgggatagagttaaccacgtggttaacgttaagccacttaaatta
agcctaattaggcctgggcaaatagtgtacggtaaggtgtactacttcccaaacgataag
gtcgccatggttaggatcttcgctgttcaacatcaggatggggttaggaggattcaagct
gagacgggtatactttacgtaacttatgcctccgaggagaggttaagcactatttatgat
gcggtgggtttaggggacttaattaaggcgagggttttatcaagtaagccaccataccac
ataagcctaaggggcccattactcggtgttgttgaaactaggtgtcctcaatgcagggca
gtgatagtaccatcaacatcaagtaaaataacgtgcccagtctgcggctttgtctttagg
aggaaagtggcggcatcatga

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