Caldivirga maquilingensis: Cmaq_0997
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Entry
Cmaq_0997 CDS
T00611
Name
(GenBank) Xylose isomerase domain protein TIM barrel
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
cma
Caldivirga maquilingensis
Pathway
cma03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cmaq_0997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cma03400
]
Cmaq_0997
Enzymes [BR:
cma01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Cmaq_0997
DNA repair and recombination proteins [BR:
cma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Cmaq_0997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
UvdE
DUF4121
Motif
Other DBs
NCBI-ProteinID:
ABW01828
UniProt:
A8MDH2
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All DBs
Position
complement(1050083..1050922)
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AA seq
279 aa
AA seq
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MAKVYVGPAGVPMGLKGKRSTLDGIKYVKDIGLNAMEVEFVRGVRMSITDAENAGKLARE
IGVRLSIHAPYFINLCSDKDSTVEASIKRLMESLERGEAMGATVVVFHPAYYGKLGPEGC
YNAVRESVMRVIELMGKEGISHVKLGLEVMARRSQFGGLEETFKLVKEINNPQVVAVVDW
GHIYARNGGSIDYKAILNMWREYFGNQPMHTHFTAVKYRRGEWVDEHEPIDTNNPPFEPL
AQELAKEDLDITIICESPLLEQDALKMRDMLLKYGNTMA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagtctacgtggggccggctggagtaccaatgggtttaaagggtaagaggagt
acattggatgggattaagtatgttaaagatattgggttaaacgccatggaggttgagttc
gttaggggagttagaatgagtatcactgacgctgagaatgctgggaaattggctagggaa
attggggttaggttatcgattcacgcaccatacttcataaacctatgcagtgataaggat
agtaccgttgaggcaagcattaagaggctgatggaatccctggagaggggggaggctatg
ggggctacggtagtggtcttccacccagcctactacggtaaattaggccctgagggatgc
tataatgcagtgagggaatccgtaatgagggtaattgaattaatgggtaaggaggggatt
agccacgttaaacttggcttagaggtaatggctaggaggagccaattcggtggacttgag
gagacttttaagcttgttaaggagatcaataaccctcaagtggtggctgtggtggattgg
ggacacatatatgctaggaatgggggaagtatagattataaggctatattaaacatgtgg
agggagtacttcggtaatcaaccaatgcacacccacttcaccgccgttaagtataggagg
ggggagtgggttgatgaacatgaaccaatagacactaataacccaccctttgaaccttta
gcccaggaattggctaaggaggatttggatataacaataatatgtgaatcacccctactg
gagcaggatgcattaaaaatgagggatatgctacttaagtacggcaacaccatggcttag
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