Caldivirga maquilingensis: Cmaq_1081
Help
Entry
Cmaq_1081 CDS
T00611
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cma
Caldivirga maquilingensis
Brite
KEGG Orthology (KO) [BR:
cma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cma03400
]
Cmaq_1081
DNA repair and recombination proteins [BR:
cma03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cmaq_1081
Archaeal homologous recombinant proteins
Cmaq_1081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
Rad50_zn_hook
NPV_P10
AAA_15
AAA_21
AAA_13
Phage_GP20
DUF4407
AAA_29
Baculo_PEP_C
ABC_tran
Crescentin
MscS_porin
ATG16
Rx_N
DUF4200
APG6_N
Snapin_Pallidin
LUC7
ADIP
SbcC_Walker_B
AAA_27
MAD
DUF1664
Prefoldin_2
CCDC93_CC
AAA
Fib_alpha
COG4_N
GAS
Motif
Other DBs
NCBI-ProteinID:
ABW01910
UniProt:
A8MDQ4
LinkDB
All DBs
Position
1131998..1134412
Genome browser
AA seq
804 aa
AA seq
DB search
MASVELIEVENIRSIRKASVRLSSGVNFIHGLNGAGKTTILDSIALALYGTDWLKRRRIK
LSELVTIGASTGAVRLMINIEGRRYIIQRVFTREKVIESQTYVMSDDGSRVAGRDKEVTR
WVTENLGVDVELFNLLYVRQGELRDILEVNRREEFKLDKLLKIDSMDKLQTDVLRSIEKR
LEGEEKALEAAIRENNDEKDRVERRLSDARVKVKEIESEISKLDGELSVKESELSKLKEE
ERRLIGIRERFNTLNDELRRLKDELNRINASIKDVEDRIKEREGIRARVKGIEEKLKGMK
ELRDEISKLEEEERELRGRVIVLESKESTIKGLERQRAELSNQLRETETELEELREKAAG
KSELEGKLKETLTRLNELDELKSRKLSLKSELSHIEEELNVLKSSKEPVCPVCKRPLKPE
DRERLIKENNEKLRLIREEIREIDSRLKDYSDLKETEEELRNRLTQAKMAAEKIPILESR
LRELRSRVNELDEELKTAREEVKELENLRVRHSEVNSRLSELRRRLTEVEMLQEEYVRLN
AELAKNPEADLRHLMENKANVEARIRELENEVEALGKELVRLREIEDKVKETEEEVKSLR
TRLDKNNGMLSQLKASIKELEDEAGRLRELISKRSERLRFIRGKIQEVAGLINAIDNAKP
ALRKALLNAINDELKDAFRMLRHKESLIDIYVTEDYEVMVKRSDGKELPVSMLSMGERNL
VALVLRFALSKAILGDIPIMLLDEPTEHLDSEHRRRVSNWLRDLSNVVDTLVVTSHVDAF
ENTADNIIRVEVTSPRGESVAYNA
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagtggagttaattgaggttgagaacattaggtcaataaggaaggcctcagtg
aggttaagcagcggggttaacttcatacatggcttaaacggtgcaggtaagacaactata
ctggattcaatagccctagccctctatgggactgattggcttaagaggaggaggattaag
ttatctgagttagttaccataggcgcctccactggtgctgttaggcttatgattaatatt
gaggggcgtaggtacattattcaacgcgtcttcaccagggagaaggttattgaatcccag
acatacgtcatgagtgatgatggtagtagggttgcaggtagggataaggaggtgactagg
tgggttaccgagaacctgggtgttgatgttgagctcttcaacctgctttacgttaggcaa
ggtgagttaagggatatacttgaggttaataggagggaggagtttaagctcgataagttg
cttaagattgactcaatggataagcttcagactgatgtattgaggagtattgagaagagg
cttgagggtgaggagaaggcccttgaggcagccattagggagaacaatgatgagaaggat
agggttgagaggaggttgagtgatgccagggttaaggttaaggaaattgaaagtgaaatc
agtaaacttgatggcgaattaagcgttaaggagagtgaactaagtaagcttaaggaggag
gagaggaggctaattggaattagggagaggttcaatacccttaatgacgagttaaggaga
cttaaggatgaattaaatagaattaacgcaagcattaaggatgttgaggacaggattaag
gagagggagggcattagggctagggttaaggggattgaggagaagcttaagggaatgaag
gaattaagggacgaaatcagtaaacttgaggaagaggagagggaactacggggtagggta
atagtccttgaatccaaggaatcaacaataaaggggcttgagaggcaacgagcagagtta
agcaatcaattaagggaaactgagactgaattagaggagttaagggagaaggcggctggt
aagagtgagttagaggggaagcttaaggaaaccttaacgaggcttaatgagcttgatgaa
ttaaagtcaaggaaactgtcacttaagagtgagttaagtcacattgaggaggagttgaac
gtattgaagtcatctaaggaaccagtatgcccagtgtgtaagagaccgttgaagcctgag
gatagggagaggttgattaaggagaataatgagaaattaaggttaattagggaggagatt
agggaaatcgactcaaggcttaaggattacagtgacttaaaggagactgaggaggagctt
aggaataggcttacccaagcaaagatggctgcggagaagatccccatccttgagtcaagg
ctaagggaattgaggagtagggttaatgaacttgatgaggagttgaagacagctagggag
gaggttaaggaattggagaacctgagggtgaggcatagtgaagtcaattcaaggcttagt
gaattaaggaggaggttaactgaggttgagatgcttcaggaggagtacgtgaggcttaat
gctgagttagccaagaaccctgaggctgatttaaggcatttaatggagaataaggctaat
gttgaggcaaggattagggaactggagaatgaggttgaggcactggggaaggagttggtt
aggcttagggagattgaggataaggttaaggagactgaggaggaggttaagagcctgagg
actaggcttgataaaaacaacggcatgttaagtcaattgaaagccagtataaaggaactg
gaggatgaggccgggcgtttaagggaattaatcagtaagaggagtgagagacttaggttc
attagaggtaagattcaggaggttgcggggttgattaacgccatagataatgccaagcca
gctttaaggaaggcgctgctgaacgccataaatgatgaattaaaggacgccttcaggatg
cttaggcataaggaatccttaatcgacatttacgtaacagaggactacgaggtcatggtt
aagaggagtgatggtaaggagttaccggtgagcatgctttcaatgggtgaaagaaaccta
gtggccctagtgcttagattcgcgttatccaaggccatactaggtgacataccaataatg
ctactggatgagccaaccgagcacttggactctgagcataggaggagggtttcaaactgg
ctacgtgacttatctaacgtagtcgatacactggtggttacgtcacatgttgatgcattc
gagaacaccgctgataatattattagagttgaggtcactagtccaaggggtgagtcagtg
gcgtataatgcgtga
DBGET
integrated database retrieval system
