Caldivirga maquilingensis: Cmaq_1747
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Entry
Cmaq_1747 CDS
T00611
Name
(GenBank) tRNA intron endonuclease, catalytic-like protein
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
cma
Caldivirga maquilingensis
Brite
KEGG Orthology (KO) [BR:
cma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cma03016
]
Cmaq_1747
Enzymes [BR:
cma01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Cmaq_1747
Transfer RNA biogenesis [BR:
cma03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Cmaq_1747
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
DUF5057
Motif
Other DBs
NCBI-ProteinID:
ABW02570
UniProt:
A8MAJ3
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All DBs
Position
1825495..1826049
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AA seq
184 aa
AA seq
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MRSAKILRVKSVGDFYIIEDELSRLLLNDKRPLDPDKIDPIELAYLIYIGDFKVYVDGRQ
VSISDVLHSGDLERFMVYLDLRNRGLYVKPVRDGKIDMLVWDKKKNALSSNPQYMIKILD
EGRGIKTTELLELTDYAERNRMKLILALLSSEGTLTYYRAFTIEPTQRDAEWLRVRQVGE
LKGP
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgaggagtgctaagattcttagggttaagagtgtgggggatttctacatcattgaagat
gaattatctaggttacttctcaatgataagaggcctcttgacccggataaaatagatcca
atagaattagcttacttaatatatattggcgactttaaggtttacgttgatgggaggcaa
gtctcaataagtgatgtacttcattcaggtgatttagagagattcatggtttacctggat
ttgaggaataggggattgtacgttaagccggttagggatggtaaaatagatatgcttgtt
tgggataagaagaagaatgccctctcatcaaatccccaatacatgattaagatacttgat
gagggtaggggaattaaaacaacggaattacttgaattaactgattacgctgaaaggaat
aggatgaagctcatattagctctattaagttcagaggggacgttaacctactatagggcg
tttacaatagagcctactcaaagggatgcggaatggttgagggtgaggcaggttggtgag
cttaagggaccttga
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