Chlamydotis macqueenii (Macqueen's bustard): 104473729
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Entry
104473729 CDS
T08437
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac04136
Autophagy - other
cmac04140
Autophagy - animal
cmac04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104473729 (ATG16L1)
04136 Autophagy - other
104473729 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
104473729 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmac04131
]
104473729 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
cmac03029
]
104473729 (ATG16L1)
Membrane trafficking [BR:
cmac04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
104473729 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
104473729 (ATG16L1)
Mitochondrial biogenesis [BR:
cmac03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
104473729 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
ATG16
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_IFT140_1st
eIF2A
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_NWD2_C
Beta-prop_HPS5
Beta-prop_WDR19_1st
Ge1_WD40
CCDC93_CC
ZapB
INO80F
Fez1
WD40_like
HTH_6
Lipoprotein_6
FUSC
AP5B1_middle
V_ATPase_I
PALB2_WD40
HEF_HK
DUF2332
WH_CYT4
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
104473729
NCBI-ProteinID:
XP_010122795
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MQSRHEISPGHDGTWNDAQLQELAQLKIKHQEELTELHKKRGELAQSVIDLNNQMQQKDK
EMQMNEAKIAEYLQKISELETECQELRSKLQDLERANQTLKDEYDALQITFNALEEKLRK
TTEDNQELVSRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEPDDDIEV
LADEISDTAEETSPVRAISRTSSKRLSQPAGGLLDSITNIFGRRSLSLFPAPQENVEPHP
GASKEVRVPTTAICVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVLGDRCEPKGSL
SGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHTLTGHSGKVLSAKFLLDNAR
IVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRTESIV
KELELLGRITALDLNSERTELLTCSRDDLLRIIDLRVGAVKQTFSAQGFKCGSDWTRVVF
SPDGNYVAAGSADGALYIWNVLTGKLERTLAKHHSSSINAVAWSPVGAHVVSVDKGNKAV
LWSEF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcagacatgagatcagtccaggacatgatggtacatggaatgatgctcagttg
caggagctggcacagctgaagataaagcatcaagaggagctgacagagctgcataagaaa
cgtggcgagttggcccagtctgtaattgatctgaataaccaaatgcagcagaaggacaaa
gagatgcagatgaatgaggcaaagattgcagagtatttgcaaaagatctctgaactggaa
acagagtgccaggaactgcgtagcaaactgcaagatcttgaacgagctaaccagacactg
aaagatgaatatgatgctctccagatcacctttaacgccttggaggagaaactgaggaaa
actactgaagacaaccaggagctggtctcacgttggatggcagagaaagcacaagaagcc
aatcgtttgaatgcagaaaatgaaaaggactcaaggagacgacaagctaggctgcagaag
gagctagcagaagctgccaaagaacccctacctgttgaaccggatgatgatattgaagtg
cttgcggatgaaatctctgacacagctgaggagacatctccagtgcgagctattagccga
acatccagtaagagactctcccagccagctggaggccttctggactctatcactaatatc
tttgggagacgttctttgtccttgttccctgctccccaggaaaatgtagagccacatcca
ggtgccagtaaagaagtgagagtgcccactactgccatatgtgtctttgatgcacatgat
ggggaggtaaatgcagtgcagttcagccctggctcccggttactagcaacaggaggcatg
gaccggagagttaagctttgggaagtcttgggagatagatgtgagcccaaaggttccctc
tctggtagtaatgctgggattacaagcatagaatttgatagtgccggttcttacctctta
gcagcttcaaatgactttgccagcagaatctggacagttgatgacaatcgattacggcac
accctgacaggtcacagcggtaaagttctgtcagccaagttcttgctggacaatgcacgc
attgtttcaggaagtcatgaccggaccctcaagctctgggacctccgcagcaaagtttgt
ataaaaacagtgtttgcaggatctagctgcaatgacatcgtatgtactgagcaatgtgta
atgagtggacattttgataagaaaattcgtttctgggatatcaggactgaaagcatagta
aaagaactggagctacttggaagaatcacagctctggacctgaactcagagcgaacagag
cttttgacttgttctcgtgatgacctactaaggatcattgatctgcgggttggtgctgtc
aagcagacgttcagtgcccagggattcaaatgtggctctgactggacgagagttgtgttc
agccctgatggtaactatgtggctgctggttcagctgatggggccctctacatttggaat
gtactcactgggaaattggagaggacgcttgcgaagcatcacagttcttccatcaatgca
gtcgcgtggtcaccagtgggtgcccatgtggtcagtgtggacaaaggaaacaaggctgtc
ctgtggtctgaattttga
DBGET
integrated database retrieval system
