Chlamydotis macqueenii (Macqueen's bustard): 104474641
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Entry
104474641 CDS
T08437
Symbol
COL3A1
Name
(RefSeq) collagen alpha-1(III) chain
KO
K19720
collagen type III alpha
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104474641 (COL3A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cmac00536
]
104474641 (COL3A1)
Glycosaminoglycan binding proteins [BR:
cmac00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104474641 (COL3A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COLFI
Collagen
Motif
Other DBs
NCBI-GeneID:
104474641
NCBI-ProteinID:
XP_010123778
LinkDB
All DBs
Position
Unknown
AA seq
933 aa
AA seq
DB search
NNTFFLQLQGLPGIPGSPGSDGKPGPPGSQGESGRSGPPGPPGPRGQPGVMGFPGPKGNE
GAPGKNGERGPGGPPGTPGPAGKNGDVGLPGPPGPTGASGERGEPGPSGPPGLQGLPGGP
GPAGENGKPGEPGPKGEIGGPGFPGPKGENGIPGERGAQGPPGPPGTRGGPGPAGSEGAK
GPPGPPGPPGGTGLPGLQGMPGERGASGSPGPKGDKGEPGGKGADGLPGARGERGNVGPI
GPPGPAGPPGDKGETGPAGAPGPMGSRGGPGERGEQGLPGPAGFPGAPGQNGEPGGKGER
GPPGLRGEAGPPGAAGPQGGPGAPGPPGPQGTKGERGSPGGPGAAGFPGARGLPGPPGNN
GSPGPPGNAGPAGKDGPPGPPGSSGAPGGPGPAGIRGEPGSPGEKGPPGARGERGAPGEP
GPQGIVGGRGNTGLPGLRGPSGPPGMAGAKGEDGKPGTNGVPGERGAPGPQGPIGQRGLP
GEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGPPGPPGHPGPAGTSGAPGKAGERGFQ
GPPGPPGSAGPAGARGPAGPQGPRGDKGETGERGSNGIKGHRGFPGTPGLPGPPGPLGPQ
GAIGSPGASGARGPPGPAGPPGKDGTSGYPGPIGPPGPRGNRGESGPAGPPGQPGLPGPS
GPPGPCCGGAAALGAGEKGPVGYGYEYRDEPKENDINLSDIMSSMKSINNQIENIISPDG
SRKNPARNCRDLKFCHPELKSGEYWIDPNQGCKMDAIKVYCNMETGETCLNANPSTVPKK
NWWTSESSGKKHVWFGESMNGGFQFSYGDPELPEDVSEVQLAFLRILSSRASQNITYHCK
NSIAYMDQANGNVKKALKLMSSMESEIKAEGNSKYTYAVLEDGCTKHTGEWGKTVFEYRT
RKTMRLPVVDIAPIDIGGPDQEFGVDIGPVCFL
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
aataacactttttttcttcaattgcagggtttgcctggaattcctggaagccctggaagt
gatgggaaacctggccctccgggcagtcagggtgaatctggccgctctggtccacctggc
cccccaggcccacgtggtcaaccaggtgtcatgggtttccctggtcctaagggcaatgag
ggtgcaccaggtaagaatggagaaagaggccctggtggaccacctggaacacctggtcct
gctgggaagaatggtgatgttggcctcccaggtcctcctggacctactggtgcttctggg
gagagaggagaaccaggaccatcaggtccacccggcctccagggattgcctggtggacca
ggaccagctggagagaatggaaagcctggagaaccagggccaaaaggtgaaattggagga
cccggattcccaggccctaagggtgaaaatggtatcccaggtgaacgtggtgcacagggt
cctccaggacctcctggaacaagaggtgggccaggtcctgctggctcagaaggtgccaag
ggtcctcctggaccccctggtccccctggaggcacggggctgcctggcttacagggaatg
ccaggagaaagaggagcttctggaagtcctggaccaaaaggggataagggagaacctggt
ggcaaaggtgctgatggccttcctggtgcaagaggagagagaggtaacgtaggtcccatc
ggtcctcctggtcctgccggcccacctggagacaagggagagaccggtccagcaggtgcc
ccaggtccaatgggttcccgtggtggtcctggtgaacgaggagaacaaggtcttcctgga
cctgctggcttccctggagctccaggtcaaaatggggaacctggtgggaaaggagaaaga
ggcccacctggtctaagaggagaggctggaccccctggagctgcaggtccacagggtggt
cctggtgcaccaggtccacctggtccccaaggaacaaaaggagaacgtggatctcctgga
ggccctggtgctgctggtttccctggtgctcgtggtctacctggtccccctggaaacaat
ggcagtccaggtcctcctggtaatgcagggcctgcaggcaaggacgggcctcccggaccc
cctggtagctctggcgctcctggcggtccaggacctgctggaataagaggtgagcctggc
tcaccaggtgaaaaagggccaccaggtgcacgaggagaaaggggagcaccaggagaacca
ggtcctcaaggtatcgtcggtggccgaggtaacacaggtttgccaggtctgcgtggcccg
agcggtccacccggtatggcgggtgccaagggtgaagatggtaaaccaggcactaacggt
gtcccaggagaacgcggtgctcctggtccacaaggtcctattggacagagaggcttacct
ggagagcctggcagagatggtaaccctggctcagatggcttgcctggacgtgacggatcc
ccaggaggcaaaggtgaccgtggtgaaaatggctctcctggccctccaggacctcctggt
caccctggacctgcaggtaccagcggtgcacctggaaaagctggtgaaagaggatttcag
ggtccacctggccctcctggctctgctggtcctgctggtgctcgaggtcctgctggtcct
caaggtcctcgtggtgataaaggtgaaactggtgaaagaggcagcaatggcataaagggt
catagaggatttcctggtaccccgggtctccctggtcctcctggtcccctgggtccacaa
ggcgcaattggaagtccaggagcttcaggtgcaaggggtcccccaggaccagctggaccc
cctggaaaagatggtaccagtggctatccaggtccaattggtcctcctggccctcgtggt
aacagaggtgaaagtggccctgcaggtccaccaggccagcctggtcttcctggtccttcc
ggtcctcctggtccatgttgtggtggtgcagctgccctgggtgctggtgaaaaaggtcca
gtgggctatggatatgaatatcgagatgagccaaaagaaaatgatatcaatctgagtgac
atcatgtcttcaatgaaatcaattaacaaccagattgaaaacatcattagtcctgatggg
tcacggaagaatccagctcgtaactgcagagacctgaaattctgccatcctgagctcaag
agtggagagtactggattgatcctaaccaaggctgcaagatggatgccatcaaagtatac
tgtaatatggaaactggtgagacgtgtctcaatgctaaccccagcactgtgccaaagaaa
aactggtggaccagcgaaagcagtggaaagaagcacgtttggtttggagaatctatgaat
ggaggcttccagttcagttatggagatcctgagcttccagaggatgtctcagaagttcag
ctggccttcctccgcatcctctcgagccgtgcctcccagaacatcacctaccactgcaag
aacagcattgcctacatggatcaagccaatggaaatgttaaaaaagctctgaaactgatg
agctctatggaaagtgagatcaaggcagaaggaaacagcaaatacacatatgctgttctg
gaagatggctgtactaaacacactggtgaatggggtaaaacagtctttgaatacagaaca
cgcaagacaatgaggttgcctgtggttgatattgcacccatagatattggtggtcctgat
caggaatttggcgtggacattggcccggtctgcttcttataa
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