Chlamydotis macqueenii (Macqueen's bustard): 104475421
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Entry
104475421 CDS
T08437
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmac03009
]
104475421 (PDCD11)
Ribosome biogenesis [BR:
cmac03009
]
Eukaryotic type
90S particles
Other 90S particles
104475421 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
S1
Spt6_S1
HAT_Syf1_CNRKL1_N
OB_RRP5_4th
HAT_PRP39_N
Suf
HAT_PRP39_C
TPR_14
OB_RRP5
HAT_Syf1_CNRKL1_C
TPR_19
TPR_15
ARM_TT21
TPR_12
TPR_CcmH_CycH
TPR_16
TPR_Slam
Motif
Other DBs
NCBI-GeneID:
104475421
NCBI-ProteinID:
XP_010127609
LinkDB
All DBs
Position
Unknown
AA seq
1813 aa
AA seq
DB search
MASVEENFPRGGIQKKPTEGKTPNPKLERDNLFDVHHEEQSQKRKRSQKDQGKQKKFKAD
KIAAAKDSILNIEPLTVEALCEGMLLLGCIKEVSDYELVISLPNGLSGFVPVTQISDAYS
KMLSKQVAQGELLEDLHSLLDMYSPGTLVRCIITSVEKSADGRRSIKLSIDPKKVNKGLN
ASALASGMLLSGIVSSMEDHGYLIDIGVSGTHAFLPRQKAQNYIKAVKRGPDLKIGQNLN
CVIVEVKNEGRVVRLSVDRSEVAASLATERQNWTLSNLLPGLVVKARVQKLAPLGIKLSF
LSSFTGIVDFMHMDPEKSMNYSPDQVVKACILSVHPTSKVVRLTLRQAFLHPGGSPNQLS
SDRMGAVVEESTVKAFYKQFGAIFELDDGTLAFARLKHLSKNRKSFKPGAFKAGYKHKCR
IIDYSLMDEMCIVSLKHQIIEARFLQYQDIHTGDVVQGKVFALKPIGMQVKVTDGIKGLV
PSMHLADVILKQPEKKYNIGDEVQCRVLECNPAGKKLILTLKKSLVQSKLPVLSSYEDAK
PDLITHGFVVCAREFGCIVKFYNDVKGLVPKNELSSEPISCPDKVFQEGQVVKVMVLKCE
PQQERLLLSFRLSSKPALEDKKEGTPKKKQEVKYQIGEMVDVKVLKKKDNGLEVSVLEDE
GNVMAWIPTVHLSDSVANCKLLWHCLQEGDVLPRVMCLSDKGGRIILSRKSAVISAVQEE
QVVRSFSEIQPGMLLTGYVRNVMPFGVFVEFPFGVTGLAPKVSMSDKFVTDTKDHFAVGQ
TVIAKVMSMDEEKQRVLLNLKVSECSSGDSAAESFTLLNQYFKEMKEIRNLLRRREESSM
AQGLCELVPGKELQLVVQDVKEDGSALFSGSCVTGLTVPATRYHLGDKSIVPGEKIKALV
LHVDVLTSTVYVSLREKLLKQRPKQVRRLTENSQHSAIVQHIAEEFAVVSLLETGQLAAI
PIASHFNDTFRFDSEKLKVGQTISATLRTVKMNDHGVLLAVQGPAKKNVFVRVRNESETA
LEEMLAPVKHSLSLGDIVTGTVKSVKPTHVTVAIDDKLTGSIHASRILDEVPIGSFPTYT
LKAGQKVTARVIGGREVNTHRYLPITHPHFTQSIPELSIRPSEIEGEVTAVLNLEEDGAL
KKRGLYNVGQTVTCFVKKYNILKNWLEVEVAPDIRGRVPHLLLSLNTKVLKHPEKSFKNG
QAISATVTGTDVTETNLCLSLTGIQSLEQGTITIGMVTKVTPNLGLTIALPGGKTGKVSI
FHLNDTYVENPLGDFKVGKIVRCYILSNENGKIQLSLRQSRLNPKSNSKVEDVEITCIND
VKKGQLVRGYVKSITPSGVFFGLSTSLLGRILFQNVSPYFVQKHSLYEKYLPEGKLLTAK
VLGVNRKQKHVELSLLPEDTGMPNILPESLGLPRYDAEEEKREEAKPKKRKICSADENDS
GIEVYYREEEDDDQEEEAAKKKSKKPSEAPRLQVSMGFTWDEDLNAMNVPVLNQKEESSE
SEEEEDPQLKMKKQTKKEKELEKQKKEKELCKLEAALMDPSRQPQSADDFDRLVLGSPNS
SILWLQYMAFHLQATEIDKARAVAERALKTICFREEQEKLNVWVALLNLENMYGTEETLM
KVFERAVQYNEPLKVFQHLCDIYANSEKYKQAEELYHTMLKRFRQEKSVWLKYASFLLKQ
GQTEATHRLLERALKALPTKEHVDVISRFAQLEFHFGDPEHAKALFESTLNSYPKRTDIW
SIYMDIMIKHGSQKEVRDIFERVIHLSLAPKKMKFFFKRYLDYEKKFGTAESVLAVKRAA
LEYVETKSSLADT
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgtggaagaaaactttcctagagggggtatccagaaaaaacctacagaggga
aaaacgcccaacccaaagttagagcgggacaatttgtttgatgtgcaccatgaagagcaa
tctcagaaaagaaaaaggagccaaaaggatcaaggaaagcagaaaaaattcaaggcagac
aagattgctgctgctaaagacagtattttgaatatcgaaccactcacagttgaggcgctc
tgtgaggggatgctgctccttggttgtataaaagaggtcagtgactatgagctagtcatc
agcttgcccaatggactttcaggatttgtgccagtcacgcagatcagcgatgcctacagc
aaaatgctgagcaagcaggtggcccaaggagaactcctggaggacttgcattcgctcttg
gacatgtattctccagggacactggtgaggtgcatcataaccagtgttgagaaaagtgct
gatggacgtcggagtatcaaattatccatcgaccccaagaaggtcaataagggtctgaac
gcctcagcgctggcatcaggcatgctgctctctggcattgtgtctagcatggaagaccat
ggctacctcattgatattggagtcagtgggactcatgctttcctgcctcgccagaaagcc
caaaattacatcaaagcagtcaagagaggacctgacttgaaaataggccagaatctgaac
tgtgtaattgtggaagtaaagaatgagggaagagtggtccgtttgtccgttgatcgatca
gaggttgctgcatcccttgccacagagcgacagaactggacactctctaatttattgcca
gggctggtggtgaaagctcgagtgcagaagctggccccactggggatcaagttgagcttt
ttgtcttccttcactggcattgtggatttcatgcacatggacccagagaaatccatgaac
tattctccagatcaagtggtgaaagcttgcatcctctctgtccaccccacctccaaggtg
gtgcggcttactctacggcaggccttcctccaccctggaggatcccccaaccagctctcc
agtgatcgcatgggggcagtggtggaggaatcgacagtcaaagctttctacaagcagttt
ggtgccatctttgagcttgatgatggcactcttgcatttgcacggttgaaacatctttca
aaaaacagaaaatcctttaagcctggggcatttaaggcaggctacaaacataagtgtcgg
atcattgactacagcctgatggacgagatgtgtattgtatctctgaagcatcagattatt
gaagcgcggtttctgcaataccaagatatccacacaggagatgtggtgcagggcaaagta
tttgctttgaaacccattgggatgcaggtgaaagtgactgatggcattaaaggcctcgtg
ccgtccatgcatctcgctgatgtgatcctgaagcaacctgagaagaagtacaacatagga
gatgaagtccagtgtcgggtgctagagtgcaatcctgcaggaaagaagctgattcttact
ctaaagaaaagtcttgtccaatcaaagcttccagttctctccagttatgaagatgcaaaa
ccagatctgatcacacatggctttgtggtgtgtgcaagggagtttggctgcattgtgaag
ttctacaatgatgtcaaaggtctggtacccaagaatgagctaagctcagaacccatatct
tgtccagataaagtcttccaggaaggccaggttgttaaagtaatggtcttaaaatgtgag
ccccagcaggaaagactcttgttgtccttcaggttatcgagtaagcctgccctggaggac
aaaaaggaaggtactccaaagaagaaacaggaagtgaaatatcaaataggagagatggtt
gatgtgaaagtcttgaagaagaaagataacgggctagaggtttctgtcttagaagatgaa
ggcaatgtcatggcctggattcccacagtgcacctctctgactctgttgctaactgcaag
ctcttgtggcactgtcttcaagagggagatgtcctcccaagagttatgtgtctaagtgac
aagggagggcgtatcatcttgagcagaaagtctgcagtaatttctgctgtacaggaggag
caagttgtgagaagtttctctgaaatccagcctgggatgctgttgactggttacgtgagg
aatgtgatgccctttggagtgtttgtggagttcccttttggtgtgacaggactggcccct
aaagtgagcatgagtgacaagtttgtgacagacaccaaggaccactttgcggtgggacag
actgtgatagcaaaggtgatgagcatggatgaggagaagcagcgtgtgctcctcaatctg
aaggtgtcagagtgcagctcaggcgattctgctgcagagagctttaccctgctgaatcaa
tatttcaaggagatgaaagaaatcagaaacttgttgagaagaagagaggagtccagcatg
gcccaaggcctctgtgaactagtgcctgggaaggagctgcagttggtcgtgcaagatgtg
aaggaggatggctcagcactgttcagtggcagctgtgtcacaggcttgactgtgccagcc
actcgctaccatctgggagacaaaagtattgttcctggtgagaaaatcaaggcattggtt
cttcatgtggatgtcctcacatccacggtgtatgtttctcttcgggaaaaactgctaaaa
caaagacccaagcaagtacgtcgactcacagagaactcccagcattctgccatcgtgcag
cacatagcagaagagtttgccgttgtgtctttgttggaaactggccagctggcagctatc
cccatagcttctcacttcaatgacaccttccgctttgactcagaaaaactgaaggtggga
caaacaatctctgcaaccttaagaacagtgaagatgaatgaccatggagtcttattagca
gtacaaggcccagcaaagaagaatgtttttgtaagggtccggaacgaatctgagacagca
ttagaagagatgcttgctcctgtaaaacactcgctttccctgggggatattgttactggt
actgttaaatctgtcaaaccaacccatgtcacagttgctattgacgacaaactgacaggt
tcaatccatgcatcccggattctggatgaagtgcccataggctcttttccaacgtatact
ctgaaagctggacagaaggtgactgcccgagttattggtggcagagaagtgaatactcac
aggtacctgcccatcacccatccgcactttacacagtccattccagagctcagcattcga
ccaagcgaaattgaaggggaagtcacagcagtgctgaaccttgaagaagacggtgccctc
aagaaacgtggactttacaatgttggacagacagtcacctgttttgtgaaaaagtataac
atcctcaaaaattggctggaggtagaagtcgcccctgacattcgaggaagagttcctcat
ctgctgctgtctctgaacaccaaggtcttaaaacatccagaaaagagcttcaaaaatggt
caggcaatatcagctacagtgactggaacagatgtcaccgaaacaaacctctgcttgtca
ctcacaggaattcagtcactggagcagggcacgatcactataggcatggtaacaaaggtg
actccaaaccttggtttgaccattgcgctgccaggtgggaagactggcaaagtcagcatc
tttcacctgaatgatacttacgtggagaatcctctaggtgacttcaaggttggcaagatt
gtcaggtgttacatcctctccaatgagaatggcaaaatccagttgtctctccgacaatcc
cggctaaacccaaagagcaacagcaaagtcgaggatgttgaaataacatgtattaacgat
gttaaaaaaggccagctagtgagaggctatgtcaagtcaatcactccatcaggtgtattc
tttggcttatccacttctcttctgggccgaatcctgttccagaatgtttctccttacttt
gtgcagaaacactccttatatgaaaagtacctgcctgaaggaaagctgctgactgccaag
gtgcttggtgtaaatagaaaacaaaaacacgttgagctgtctcttctgcctgaggacact
gggatgcccaacatcttgcctgaatccctaggcctaccacgatatgatgcagaggaagag
aaaagagaggaggcaaagccaaaaaaaaggaagatctgctcagcagatgaaaatgacagt
ggaattgaggtatattaccgggaggaggaagatgatgaccaggaggaagaggcagctaaa
aagaaatctaagaaacctagtgaagctcccaggctgcaggtttccatgggcttcacctgg
gatgaggacctgaatgcaatgaatgtacctgtgctgaatcagaaggaagagagctcagag
agtgaggaagaggaggatccgcagttgaagatgaagaaacaaacaaagaaggagaaggag
ctagagaaacaaaagaaggagaaggagctctgcaaattagaggcagccctgatggacccc
agtcgacagccccagtcagcagacgactttgaccgtctcgtgctgggcagtcccaatagc
tccatcctctggctacagtacatggctttccacctccaggctactgagattgacaaggcc
agagctgtggcagagagagcgcttaaaacaatctgcttcagggaagaacaggagaagctg
aatgtctgggtggctctgctgaacttggagaacatgtatggtactgaggagacattgatg
aaggtctttgagagagctgttcaatacaatgaacctctgaaagtcttccagcatctgtgt
gacatctatgccaattctgagaagtacaagcaagcagaagaattgtaccacacaatgctg
aagcgtttccgtcaggagaaatccgtgtggctgaaatatgcctctttcctcctgaagcaa
ggccagactgaagctacgcataggcttttggagcgtgctctgaaggctttgcccaccaaa
gaacatgtggatgtaatttcaaggtttgcccagcttgagttccattttggggacccagaa
catgccaaggccctctttgagagcaccctcaacagctatcccaaacggacagacatctgg
tccatctacatggacatcatgatcaaacatggcagccagaaggaagtacgggacatcttt
gagagggtcatacacctgagcttggcaccaaagaagatgaaattcttctttaaacgctac
ctggattatgagaagaaatttggtacagcagaaagtgtcctggctgttaaaagagcagca
cttgagtatgtggagaccaagagttcgcttgctgacacctaa
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integrated database retrieval system
