Chlamydotis macqueenii (Macqueen's bustard): 104475940
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Entry
104475940 CDS
T08437
Symbol
CTR9
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmac03021
]
104475940 (CTR9)
Transcription machinery [BR:
cmac03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
104475940 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_1
TPR_2
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_7
TPR_6
TPR_11
ARM_TT21_5th
TPR_Slam
ANAPC3
TPR_EMC2
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
104475940
NCBI-ProteinID:
XP_010113846
LinkDB
All DBs
Position
Unknown
AA seq
1169 aa
AA seq
DB search
IEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDFVKLLE
AARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMADKIIM
YDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYRGALAY
YKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAXXXXXXXXXXALELNSKCVGALVGL
AVLELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHN
TEVEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKE
NASQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIEL
AQILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASL
DRAKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLG
AMARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQ
NDTYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLA
HKGYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTE
VLLYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKE
VLNAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEE
RELRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGEVEGS
KEKKRGGGGGRRSKKGAGEFDEFVNDDSDEDLPVSRKKKKRKGSGSEQDGEEEEGERKKK
KRRRPQKADEGSDDEEHENGPRPKKRRPPKAEKKKAPKPERLPPSMKGKIKSKAIISSSD
DSSDEDKLKIADDGHARNSNSDSDDGEQQHSKRVVSDSDSDNRNKSGSEAGSLKRSSVHP
SEEDSDSDRSARKRRRSDSEQSDNESVQSGRSHSGGSENESRPASRSADSDRDSERGSDN
EGSGRGSGNESEPERSNDEGSEGGSDDSD
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
attgagatccctctccgggacaccgatgaggttattgagcttgacttcgatcagttacct
gagggtgatgaagttataagtatactgaaacaggaacacactcaactgcacatatggatt
gccttagcgctggagtactacaaacaagggaaaacagaagactttgtgaagctattggaa
gctgcacgcatagatggcaacttagactatagagaccatgaaaaagatcagatgacatgt
ctggatacgctggcagcatactatgtacagcaggctcgaaaggagaagaacaaagataac
aagaaggagctcattacgcaagctaccttgttgtatactatggctgacaaaattatcatg
tatgatcagaatcacttgttgggaagagcctgcttttgtctgcttgaaggtgataagatg
gaccaagctgatgcgcagttccactttgtgctcaaccagtctccaaataatattcctgcc
cttcttggtaaagcatgcatttctttcaacaagaaagattatagaggagcccttgcttac
tacaagaaagcgttgcgtactaatccaggttgcccagctgaggttcgattaggtatgggc
cattgcttcgtgaaactgaacaagttggaaaaagctcgcttagcgnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnngctctggagctaaattcaaaatgcgtaggggctttggttggactg
gctgttctggaactcaataataaagaggctgattccatcaagaatggtgttcagctcctc
tctagggcttacacaattgatcccagtaatccaatggtgttgaatcacttggctaatcac
tttttcttcaagaaggattatggtaaagtacaacacttggctcttcatgctttccataat
acagaagttgaagcaatgcaggcggagagttgttatcagctggctagatcttttcatgta
caggaagattatgatcaagcgttccagtattattaccaggccactcagtttgcttcatct
tcttttgtacttccattttttggattgggtcaaatgtacatttatcgaggggacaaagag
aatgcatcacaatgctttgaaaaagttttgaaggcctatcctaacaattatgagactatg
aaaatccttggatctctttatgcagcttcagaagaccaggagaaacgggatattgcaaag
ggacatctaaaaaaagtcacagagcaatatcctgatgatgtagaggcatggattgagcta
gcccaaattctagaacagactgatatacagggtgcgctgtcagcctatggtacagccaca
cgcattctgcaagagaaagtacaggctgatgtcccaccagagattttgaataatgtgggt
gctctgcacttcagactgggaaacctaggagaagcaaagaaatattttttggcatcactg
gatcgtgcaaaagcagaagctgaacatgatgagcattattacaatgctatttctgtaaca
acgtcgtataaccttgccagactatatgaggcgatgtgtgaatttcatgaagcggaaaag
ctgtataaaaacattttaagagaacatcctaattacgttgattgctacttgcgcttggga
gctatggctagggataaaggaaatttttatgaggcttctgattggtttaaagaagcactt
cagataaatcaggaccatccagatgcttggtctctgattggcaatcttcatttggctaaa
caagagtggggtccaggtcaaaagaaatttgaaagaatattgaagcagccctccacacaa
aatgatacttattccatgttggctcttggcaacgtctggttgcagactctacatcaaccc
acaagagacagagaaaaggaaaagcgtcatcaggaccgtgcattagcaatctacaagcaa
gtactcagaaatgatccaaagaatttgtatgctgctaacggcataggagctgtcttggca
cataaaggatatttccgcgaagctcgtgatgtttttgcccaagtgagagaggcaacagca
gatatcagtgatgtgtggctgaatttggcacatatctacgtagaacagaaacagtacatc
agtgctgtgcagatgtacgaaaactgcctcagaaagttctataagcatcaaaatactgaa
gtattgttatatttggcccgggcactcttcaaatgtggcaaattacaggaatgcaaacaa
actttgttaaaggccaggcatgtagcaccaagtgatacagttcttatgtttaacgtggct
ttagtgttacaaagactagctacctctgtcctgaaagatgaaaaaagcaatctgaaggag
gtgcttaatgctgtgaaagaactagagctagcccacaggtacttcagttacttgagtaaa
gtaggtgataagatgagatttgatttggcacttgctgctacggaagccaggcaatgctct
gacttactgagtcaagcccagtatcatgtggctcgggcacgcaagcaggatgaagaagag
agggagctgcgagcaaagcaagaacaagaaaaggagctgcttcgccaaaaactgcttaaa
gaacaggaagagaagcgcctaagagaaaaagaagaacagaaaaaacttctggaacaaaga
gctcaatatgtggagaaaaccaagaatattcttatgttcactggtgaagtagaaggatca
aaggagaaaaaacgtggtggcggtggaggcaggcgttccaaaaaaggagcaggggaattt
gatgagtttgtcaacgatgacagtgatgaagatctgcctgtgtctagaaagaaaaagaag
aggaagggcagtggtagtgaacaagatggggaagaagaggagggtgagcgaaaaaagaag
aagaggaggagaccccagaaggcagatgaggggagcgatgatgaagaacatgaaaatggt
ccaagacctaaaaaacgacgtccaccaaaagcagagaaaaagaaagctcccaaaccagaa
cgtctgcctccttcaatgaaaggaaagatcaaatcaaaagccatcatttcatcaagtgat
gattcttctgatgaggataaactcaaaattgctgatgatggacatgctaggaatagcaac
agtgattcagatgacggggaacagcagcacagtaaacgcgttgtttctgatagtgattct
gataacagaaacaaatctggtagtgaggcaggtagtctgaagaggtccagtgtccaccca
tctgaggaagattctgacagtgacaggtcggctagaaaaaggaggcggtcagattcagag
cagtctgacaatgagtctgtacagtcggggagaagtcattctggtggttcagaaaatgaa
tctcgcccagcttctcgtagtgctgattcagacagagattctgagagaggatctgacaac
gagggatctggcagaggatctggtaatgagtctgaaccagaacgatccaatgatgaggga
tcggaaggtggttcagatgacagtgattag
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integrated database retrieval system
