Chlamydotis macqueenii (Macqueen's bustard): 104476132
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Entry
104476132 CDS
T08437
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin Fat 4-like
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
He_PIG
Motif
Other DBs
NCBI-GeneID:
104476132
NCBI-ProteinID:
XP_010114134
LinkDB
All DBs
Position
Unknown
AA seq
1905 aa
AA seq
DB search
LFSINSTSGALHTRATIDRESLASDVVDLVVLSSQPTYPSEVRVLVLDLNDNAPVFPDPS
IVVTFKEEXSGRQLILDTATDADSGTNGVDHGSYRIVAGNEEGRFRLNITLNPSGEGAFL
HLVSRGGLDREATPTYQLLVQVEDKGEPRRRGFLQVNVTVQDINDNPPIFSQTLYQARVP
EDAPVGASVLQVAAADADEGTNADIRYRLEGGDGGGGGGGGGEGTGSLPFEVDPETGVIR
IRERLDYEMRQQYSLTVQAMDRGVPALSGRAEALIRLLDVNDNEPRVKFRYFPATSRFAS
VDENAAPGTVVALLTVSDADSPAANGNISVSILAGNEQRHFEVHSSKVPNLSLIKVAAAL
DRERIPAYNLTVAVADNYGALPPAAPVSRSSVASLVIFVNDINDHPPVFGQSVYRVNISE
EVPLGSYVRGLSATDRDSGLNANLKYSIVSGLLPFLPMGGLDRETASQVVLNISARDQGV
QPKFSYAQLVVTILDVNDNKPRFNQPEGYQVSLAENSPTGTELLVLSATDGDLGDNGTVR
FSLQEAEPALAVVGPSSMTPRRVFRLDPISGKLSTISQLDREEQAHFSLQVLATDLGSPP
LSSITRVNVSLLDVNDNSPVFYPVQYFAHIQENEPAGTYVTTVSATDPDLGPNGTVKYSI
SAGDTSRFQVHGQTGVITTKIALDREEKTAYQLQIVATDGGHLQSQNQAIVTITVLDTQD
NPPVFSQGMYSFVVFENVALGYHVGAVFASTMDLNTNISYLITSGDQRGVFAINRATGQI
TTASIIDREEQAFYQLKVVASGGAITGDAMVNITVKDLNDNSPHFIHAVESVNVVENWKA
GHTIFQAKALDPDEGVNGVVLYSLKQNPKGLFSIDEETGAIRLIGPLDINAGSYQVEILA
SDMGVPQLSSNFILTVSVHDVNDNPPVFDQLSYEITILESEPVNSRFFKVQASDKDSGVN
GEIAYSIMEGNTGDAFGIFPDGQLYIKSELDRELQERYVLLVVASDRAVEPLNATVNVTV
ILEDVNDNRPLFNSTNYVFYFEEEQRGGSYVGKINAVDKDFGPNGEVRYSFEHMQPDFEL
NAVTGEIRSTHQFDREALMRQRGAAVFSLTVIAMDQGLPKPLKDQATVQIFLKDINDNAP
KFLKDLYQATISELAVNLTQVLRVSASDVDEGVNGLIQYSVIKGNEEKQFAIDGSTGQVT
LVGRLDHEATASYSLVIQAVDSGAVSLSSTCMLSIDVLDENDNSPSFPKSTLLVDVLENM
RVGELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLYKL
NITAKDQGRPPRSSTMSVVIHVRDFNDNPPNFPPGDIFKSIVENVPVGSSVVSVTAHDPD
ADINGQLTYAIIQQMPRGNHFRIDEVRGTIFTNAEIDREFANLFELTVKATDQAVPVESR
RFALKNVTILVTDQNDNVPVFISQNALAADPSVVIGSILTTIIAADPDEGANGEVEYEII
NGDTETFIVDRYSGDLRVASALVPSQLIYNLIVSATDLGPERRKSTTEMTIILQGVDGPV
FTQPKYITILKEGEPIGTNVISIEAASPRGSEAQVEYYIVSVRCEDKSLGRLFTIGRHTG
VIQTAAILDREQGARLYLVDVYAIEKSSVLPRTQRAEVEITLQDINDNPPVFPTDMLDLT
VEENIGDGSKILQLTAMDADEGANALVTYTIISGADDSFHIDPESGDLIATKRLDRERRS
KYSLLVRADDGLQSSDMRINITVSDVNDHIPRFSKPVYSFDIPEDATPGSLVAAILATDD
DSGINGEITYTVSEDDEEGIFFLNPVTGVFNLTRALDYEAQQYYILTVRAEDGGGQFTTI
RVYFNILDINDNPPVFSMTSYSTSLMENLSPGSAILNFSVTDADD
NT seq
5716 nt
NT seq
+upstream
nt +downstream
nt
ctcttctccatcaacagcacctcgggtgccctgcacacccgggccaccatcgaccgcgag
agcctggccagcgacgtggtggacctggtggtgctctccagccagcccacctaccccagc
gaggtgagggtccttgtgctggacctcaacgacaatgcgcctgtcttccccgacccctcc
atcgtggtgactttcaaggaggagnggagcgggcgccagctcatcctggacacggccacc
gatgctgacagtggcaccaacggcgtcgaccatggctcctatcgcatcgtggctggcaac
gaggaggggcgtttccggctcaacatcaccctcaaccccagcggtgaaggagctttcttg
cacctggtttcccggggtgggctggaccgggaggccacccctacctaccagctgttggtg
caagtggaggacaagggtgagccccgtcggcgggggttccttcaggtcaatgtcaccgtc
caggacatcaatgacaacccacccatcttcagccagactctttaccaggcacgagtgcct
gaggatgcgcccgttggggccagtgttctccaggtggctgcagctgatgctgatgaaggc
accaatgctgacatccgctaccgcctggaaggaggtgatggtggtggtggtggtggtggt
ggtggggaggggactggcagcctcccgtttgaggtggaccctgagaccggggtgatccgc
atccgggagcgcttggactacgagatgcgacagcagtactcactgacggtgcaggccatg
gaccgaggggtgccggcgctgagtggccgggctgaggccctcatccgcctgctcgacgtc
aacgacaacgagccccgggtgaagtttcgctatttcccggccacctcccgctttgcctcc
gtggacgagaacgcggcccctggcacagtggtggccctgctgacggtgagcgatgccgac
tcccccgcggccaacgggaacatttctgtgtcgatcctggcgggaaacgagcagcggcac
tttgaggtgcacagcagtaaggtacccaacctcagccttataaaggtagcagccgcgttg
gaccgggagcgcatcccggcctataaccttacggtggcggtggctgataactacggggcc
ctgccaccggcagctcccgtgagccgctcgtcagtagctagcctggtgatcttcgtgaat
gacattaatgatcaccccccggtctttgggcagtcggtctacagggtgaacatcagtgag
gaggtgcccctgggcagctatgtgcggggcctgagtgccacggaccgtgactcgggcctc
aatgccaacctcaaatacagcattgtctcgggacttcttccctttctcccgatgggcggg
ctggaccgggagactgcttctcaggtggtgctcaacatcagtgcccgagaccagggggtg
cagcccaagttctcctatgcacagctggtggtgaccatcctggatgtcaacgacaacaaa
cctcgcttcaatcaacctgagggctaccaggtatccctggctgaaaattccccgacagga
actgagctgctggtcctgagtgccacagatggggacctgggggacaacgggactgtccgc
ttctccttgcaggaagctgagccggcactggcagtggttggcccatcctccatgacccct
cgccgggtctttcgcttggatcctatatcgggcaagctcagcaccatctcgcagctggac
cgggaggagcaggctcacttctccctgcaggtcctggccactgatttaggctctcctccc
ctttcttcaatcacccgagttaatgtgagtctcctggatgtgaatgacaatagccctgtg
ttttaccccgttcagtattttgctcatatccaagagaatgagccagctggaacctatgtg
accacagtatctgccacagaccctgatctgggacccaatgggacagtcaagtacagcatc
tccgctggagacacctccaggtttcaggtccatggccagacaggggtcatcacaaccaaa
attgcccttgacagggaggagaaaactgcttaccagttgcagatcgtggccactgatggt
ggtcatcttcagtcgcagaaccaagccattgtcaccatcactgtcttggacacccaggac
aacccacctgttttcagccagggcatgtacagttttgttgtctttgaaaatgttgcccta
ggttaccatgtaggtgctgtttttgcttccaccatggacctcaacaccaacatcagttac
cttatcacttcaggtgaccaaaggggcgtgtttgccatcaacagagcaacggggcagatc
accacagccagtattattgacagggaggagcaagcgttttaccagctgaaggtggtcgct
agtggtggggcgataactggggacgctatggtcaatataactgtcaaagatttaaatgac
aattccccacactttattcatgcggtggaaagtgtaaatgtggttgaaaactggaaagct
gggcataccatattccaggccaaagctcttgaccccgatgaaggtgttaatggcgtggtc
ctttacagccttaagcaaaaccccaagggcttgttttcaatcgatgaagaaacaggtgcc
ataaggttaataggaccacttgacataaatgctgggtcttaccaggttgaaatcttggcc
tcggatatgggggtgccacagctgtcctctaactttatcctgactgtctctgttcatgat
gtaaatgataacccgcctgtgtttgaccagctttcctatgaaattactattttggagtcg
gagcctgtgaattccaggttctttaaggtgcaggcttccgacaaagactcgggagtgaac
ggtgagatagcttatagtataatggaaggaaatactggggatgcctttggcatattcccc
gatggtcagctgtatataaagagtgaactggaccgtgaacttcaggagagatatgttttg
ctggtggttgcctctgatagagcagtagaaccactcaatgctactgtgaacgttaccgta
attttggaggatgtaaatgataataggcccctgttcaacagtaccaactatgtgttttat
tttgaagaggagcagagaggtggatcgtatgtaggtaagataaatgctgtagataaagac
tttgggccaaacggtgaagtcaggtactcctttgagcacatgcagccagattttgagctg
aacgcggtaacgggggaaataagaagcactcaccagtttgacagagaagctcttatgaga
caaaggggagctgcggtatttagtctcacggtgatagcaatggatcaggggttgccaaag
cctctaaaggatcaggccactgtacaaatcttcctgaaagacatcaatgataacgctccc
aaatttttgaaagatctctaccaggctactatatcagaattggcagtgaacctgacacag
gttctgagagtttccgcctcagatgttgatgaaggggttaacggattgattcagtactct
gtcatcaagggaaatgaagaaaaacagtttgcaatagatggtagcacaggccaggtgacc
ttagtaggcagactagatcatgaagctactgcgtcatattcgcttgtcatccaagcagta
gactctggagcagtttccctaagttcaacttgcatgctgagcattgatgtattggatgag
aatgacaacagtccttccttccctaaatcaaccttgttagtggatgtcttggaaaatatg
agagtcggtgaactggtgtcatctgttactgccactgattctgattcgggtgacaatgct
gacctccactatagcattacagggacaaacaatcatgggacctttagcatcagtcccaac
accggtagcatttttcttgcaaagaaactggactttgagacacagtctctgtataagcta
aatataacagcaaaagaccaaggaaggccaccacggtcatctacaatgtcagtggtaata
catgttagggattttaatgacaaccctcctaattttcctcctggggacatctttaaatct
attgttgagaacgttcctgttggtagctctgtcgtttctgttactgctcatgatccagat
gctgatattaatgggcagctaacgtatgcgatcattcaacagatgccaaggggtaatcat
ttccgtatagatgaagtgagagggacgatatttaccaatgctgaaatagatcgcgagttt
gctaatctctttgagttaacagtcaaagccactgatcaggctgttcctgtggagtccaga
cgatttgctttgaagaatgtgaccattttggtgacggatcaaaatgacaatgttcctgtg
ttcatatcgcaaaatgctctcgcagccgacccctcggttgtgattggttcgatcctaacg
accattattgctgcagatcctgacgagggcgccaacggagaggtggaatatgaaataatc
aatggagataccgaaaccttcatcgtggatcgttatagcggagatttaagagtagcgtca
gctttggtgccttctcagctcatatacaatcttatagtttctgccacggatcttggccct
gaaaggagaaaatctaccaccgagatgactataattctgcaaggggttgacgggcctgtt
ttcactcaaccaaaatacataactatcttaaaagaaggcgagcctattgggacaaacgtg
atatctatcgaagcagcaagtccgcggggctccgaagctcaggtggaatattacatcgtg
tccgtccgatgcgaagataagagtctcgggcgccttttcaccattggacgccatactggt
gtcatccagactgctgccatcttggacagggagcaaggagcgcgcctctacttggtggat
gtttacgccattgaaaagtcatctgttctgccccgcacacaacgagcagaggtggaaata
acacttcaggatatcaatgacaacccaccagtgttccccacagatatgcttgatctgact
gtagaagagaatataggagatggatctaaaatattgcagctgacagccatggatgctgat
gagggagccaatgccctcgtcacatacactattatcagtggtgcggatgatagcttccac
attgaccccgagtcaggagacctgatagccacaaagcgcctggaccgggagcgccgctcc
aagtactccttgctggttcgtgctgatgatggcctgcagtcctcagatatgcgaataaac
atcactgttagtgatgttaatgaccatatccccagattctccaagccggtgtattccttt
gacatcccagaagatgctactccaggttccttagtggcagccattctagccactgacgac
gactccggtatcaacggggaaatcacatacactgtaagtgaagatgatgaagaaggtatc
ttcttcctgaaccccgttaccggagtcttcaacctcactcgcgcgctggactatgaagca
cagcagtattacattcttaccgtccgtgcggaagacgggggaggccaatttactaccatc
agagtgtacttcaatatattggacatcaacgataacccgccagtattcagcatgacctca
tacagcacgtctttgatggagaacctgtctccaggatccgctattctcaacttcagtgtc
actgatgcagatgatg
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