Chlamydotis macqueenii (Macqueen's bustard): 104476218
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Entry
104476218 CDS
T08437
Symbol
RC3H1
Name
(RefSeq) roquin-1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmac03000
]
104476218 (RC3H1)
04121 Ubiquitin system [BR:
cmac04121
]
104476218 (RC3H1)
Transcription factors [BR:
cmac03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
104476218 (RC3H1)
Ubiquitin system [BR:
cmac04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104476218 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
zf_CCCH_4
FYVE
zf-CCCH_4
PaaA_PaaC
Vesi_VP2
Baculo_IE-1
zf-RING_4
zf-RING_10
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
104476218
NCBI-ProteinID:
XP_010114243
LinkDB
All DBs
Position
Unknown
AA seq
1124 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGAEDTKHYEEGKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQLPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSGAILSEE
GGVDLPNRKTSALPNGIVSTGSTVTQLISRGTDSGYETALKPGKMDHLSSSAPGSPPDLL
ESVPKSPISALPVNPHPVPTRAPTDLPSVSVTKQLQMVPRGSQLYNTQQADMFYQDPRGA
APPFEPAPYQQGVYYPTQSMSRFVRPPPSAPEPAPPYLDHYPPYLQDRVVSPQYTQPQQY
PPMGQPIYPPHYDSRRVYPPVQPYQREEIVRGSPVPIEIPQAAVPSYVPESRDRYQQTEG
YCPVAPHLSQIRPSCHRPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLPHPFHSE
EYLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAARSVEMANVDSKTMR
DQRLDMQRRAAETGDDDLIPFGDRPTVSRFGAISRTSKAMYQNSGPMQAMAVQGATTKSV
ISDYSPYGAHGGWGGSPYSPHQNIPSQGRFNDRERLSMSDVTGHGKQLPSAEREQQLRME
LQQVDHQISQQTQMRGLEAVSNRLLLQREATTLAGQPQPPPPPPKWPGMISSEQLSLELH
QVEREIGKRTRELSMESQSSLDMKNKLGTTKQAENGQLEPQSKVSAEDLALTFSSDVPNG
SALTQDNIALLSNKTASLSLSEDPEGGGDNHDSQRAGVTPPSAP
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggattttctctcctgcccaatttgcacccagact
ttcgacgaaacaatccggaagcccatcagcttgggttgtggccacactgtctgcaagatg
tgcctcaacaagctccaccgtaaggcatgcccttttgaccagaccactatcaatacagac
attgaactccttcctgtgaactcagccttgctgcaactagtgggtgctcaggttcctgag
cagcagccaattactttatgtagtggagctgaagataccaagcattatgaggagggcaag
aaatgtgttgaagaattagcattgtacctcaaaccactcagcagcgcaagaggtgtgggt
cttaacagtactactcagagcgtgctaagtcgtcccatgcaaaggaaacttgtgacatta
gttcactgccagctagtggaggaagaagggcggatcagagccatgcgtgcagcacggtcg
cttggtgaaagaacagtcacagagctcattcttcagcatcaaaaccctcagcagctctct
tccaacctctgggctgctgtgagagcaagagggtgccagttccttggaccagcaatgcaa
gaggaggctttaaagctggttctgctggctctggaagatggatctgctttgtcacgaaag
gtcttggttctctttgtggttcagaggctggagccgcgatttcctcaagcttctaaaact
agcattgggcatgttgtccagctgctttacagagcctcgtgcttcaaggtgacaaagcga
gatgaggattcctccctgatgcaactgaaggaggaatttcggacttacgaagctctgaga
agggaacatgattcccagatagttcaaatagctatggaagcaggtttacgcattgcaccg
gatcagtggtcctcactgttgtacggagaccagtctcacaaatcccacatgcagtctatc
attgacaagttgcagaccccagcctcgtttgcacagagtgttcaggaattaactattgcc
cttcagaggactggtgatccagctaacctgaatcgtcttcgacctcacctagagctcctg
gcaaatattgaccctagtccagatgctccacctccgacgtgggaacaactggaaaatgga
ctagttgctgtgaggactgtggttcatggcttagttgattacatccagaatcacagcaag
aaaggaacagatcagcaactgcctcctcagcacagcaagtacaagacatacatgtgccga
gacatgaaacagagaggaggatgcccgcgaggggccagctgcacctttgcacattcacag
gaggagctagaaaaattccgtaaaatgaacaagcgtctggttcccagaagaccgctgagt
gcctccctgggccagctaaatgaggtgggcctgccttcaggagctatcctctcggaggaa
gggggagtggacttgcccaataggaaaacttcagctctgccaaatggaattgtgtcaacg
ggcagcacggtgacgcagctaatttctcgcgggactgactccggttatgaaactgctctg
aagccagggaagatggaccatctgagtagcagtgcccctggatcccctcctgacttgctg
gaatctgtccccaagagccctatttctgccttaccagtgaaccctcatcctgtgcccacg
cgggcaccaacagatctgccttcggtgtctgtcaccaagcagttgcaaatggtaccacga
gggtctcagctgtataatactcagcaagcagatatgttttatcaggatcctagaggagct
gccccaccatttgagccagcaccctaccaacaaggggtttactatcccactcagtccatg
tctcgctttgtccgacctcctccttcagctcctgaacctgctccaccttacttagatcat
tacccaccttaccttcaggaccgtgtggtgagcccgcagtacacgcagccgcagcagtat
cctccaatgggacaacccatatacccaccacactacgacagccgacgcgtatatcccccg
gtccagccataccagcgagaggagattgtccgaggaagccctgtacccattgaaattccg
caagcagctgtaccttcctacgtacctgaatccagagacagataccagcaaacagagggt
tattgcccagtggctccacatctcagtcagatcagaccttcatgccacaggccacatccc
agcctggacgaacttcaccgccgaaggaaagagatcatggcccagctagaagagaggaag
gtgatttctccacctccttttgcgccatcaccaaccttgcctcatccttttcattcagag
gagtacttggatgaagacctgaaagtagctgggaagtacaaaggaaatgactatagccag
tactctccctggtcctgtgacaccatcggctcctacattggaaccaaagatgcaaaaccc
aaagatgttgtggcagcaaggagtgtggagatggcgaacgtagatagtaaaaccatgcgt
gaccagcgattagacatgcagcgaagagcagcggagactggtgatgatgacctcattcca
tttggagaccgaccaactgtgtcgagatttggggctatctctcgtacttccaaagcgatg
taccagaattctggtcccatgcaggccatggcggttcagggagctaccaccaaatccgtc
atttcagactacagtccttatggagctcacggtggctggggaggctctccatattctcct
catcaaaatataccttctcagggacgttttaatgacagggagagactgtccatgtcagat
gtgactggtcatgggaaacagttgccctcagcggagcgagagcagcagctgcgcatggag
ctgcagcaagtagaccatcagattagccagcagacacaaatgcgaggactagaggctgtt
agtaacaggctgctgttgcagagggaggcgactaccctggcaggccaaccacagccccca
cccccacctcccaagtggcctgggatgatctcaagtgaacagctgagcttggagctacac
caggtggaaagggaaattgggaagagaacccgtgagctgagcatggagagccagtcttca
ctggacatgaaaaacaaactgggcaccactaaacaggcagaaaatggacagttagaacca
caaagtaaggtttcagctgaggacctcgcactgacattcagcagtgatgttccgaatgga
tcagccttgacacaagataacattgctctcctgtcaaacaagactgcgtctctcagcctg
tcagaggacccggagggaggaggagacaaccatgattcccagagagcgggagttacgccc
ccatctgctccatga
DBGET
integrated database retrieval system
