Chlamydotis macqueenii (Macqueen's bustard): 104476867
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Entry
104476867 CDS
T08437
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cmac00536
]
104476867 (COL13A1)
Glycosaminoglycan binding proteins [BR:
cmac00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104476867 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
104476867
NCBI-ProteinID:
XP_010115099
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MLEEKSWKGVGEAAFDRGCVAPPRTSDGERCCRLPLLLGSGLPGISLLSLVLSLLLYFRT
SDLQSRVSHLEADRPTQLPAWLSADQMETAILGRVDQLLDEKLKFHLPRHREVRETHQGC
NCPAGPPGPTGKPGLQGDKGAMGIPGRPGLKGQPGEKGAPGEAGMSIIGPRGPPGQPGTR
GFPGFPGPIGLDGKPGHPGQKGEMGAAGPRGQPGHPGQKGEKGQCAEYPHRLLPLLNSVR
LAPPPVIKRRTFQGEQGQAGIQGPPGPPGPPGPAGPAGPEGTPGQPGPIGPPGRAGEPGK
PGKDGKGLPGPPGPKGDTGIQGYPGRKGEKGRTGEPGLPGLPGMKGEKGNTENALAGGRG
EPGPPGLPGPPGPKVKAGDTGWPGAAGSWGEEGEPGSPGDQGPMGPRGPKGEPGKDEMMD
YDGNISEALQEIRTLALMGPPGLPGVAGPPGPPGQKGEIGLPGPPGHDGEKGPRGKPGEM
GPPGPHGLPGKDGPPGIKGEPGHIGVRGEKGDKGEPGQAGPPGLDGPTGEKGERGDQGMP
GPSGLPGPIGLPGLTGEKGKPGERGDKGNPGDSISGPPGPQGPPGPPGLQGLPGPKGEAG
IDGMKGEKGAQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVSGPAGPKGERGSKGDPG
VVGPMGPAGLPGLQGLPGDKGIRGERGKKGSRGSKGDKGDQGAPGLDAPCPLGEDGLPVQ
GCWNK
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgttggaggagaagagctggaaaggcgtcggcgaagcagcttttgacagggggtgcgtg
gctccccccaggaccagcgacggggagagatgctgccgcctccctctcctgctgggctcg
gggctgcccggcatctccctgctctctctggtgctgagcctcctgctgtactttcggacc
tccgatctgcagtcccgggtgtcccacttggaagcggacagacccacacagctccctgcc
tggctctcagcagaccaaatggagacagctattttgggaagagttgaccaactgcttgat
gagaaattaaagttccacttgccgagacatcgagaagttcgagagacacaccagggatgc
aactgcccagcaggtccacctggccctacaggaaaaccagggctccagggagacaaaggt
gcgatggggatccctgggcggccgggactaaaagggcaacctggagagaagggtgctcca
ggagaagcaggcatgtctatcatcgggccccgcggtccaccaggacagcctggaacaaga
ggttttcctggattcccggggcccattggcttggacggcaaaccgggtcatcctggacag
aagggggagatgggtgctgcaggtcccaggggacaacccggacacccaggacaaaaagga
gaaaagggtcagtgtgcagagtacccgcacaggctgttgcctctcctcaattcagtgcgg
ctggctccacctccggtcataaagagacgcactttccagggtgaacaaggacaagctgga
atccagggtcctccggggccccctggcccaccagggcctgctggaccagcaggacctgaa
ggaaccccaggacagcccgggccaattgggccacctggcagagcgggagaacctgggaaa
cctggcaaagatggaaagggcttacctgggcctcctggaccaaagggagacactgggatt
cagggataccctggcagaaagggtgagaagggacgaactggtgaacctgggcttcctgga
ctccctggcatgaagggagagaagggaaatactgagaatgccctggcaggaggtagaggg
gaacccggccctccaggtctgcccgggccccctggaccaaaggtgaaagctggtgacact
ggctggcctggtgctgcagggtcatggggggaagaaggggaacctggttcaccgggagac
cagggacccatgggcccaaggggccccaaaggagagcctggaaaggacgaaatgatggac
tatgacggtaacatcagtgaagctctccaggaaatacgaactttggccttgatgggaccc
ccaggacttccgggtgtggctggacctccagggccaccgggacagaagggtgaaattggc
ttgccaggtcctccaggccatgacggagaaaagggaccacgtggcaagcctggagaaatg
ggcccccctggccctcatggactgccaggaaaggatgggccacctggaataaagggagag
ccaggccatattggggtcagaggagaaaagggcgataaaggagagccaggacaagctggc
ccaccaggtctcgatggccccactggagagaaaggcgaacgaggtgaccaagggatgcca
ggaccgtcaggattgccaggtcccattggacttccaggattgacaggagagaagggcaag
cctggggagcgcggagacaaaggaaatccaggagactcgatatctggccctcccggaccc
caaggcccaccaggacctccaggtcttcagggcctcccaggaccgaagggggaagcgggg
attgatggaatgaaaggagagaagggtgcccagggtgaaaaaggagacagagggccactg
ggattacccggtgcttcaggtttagacggcaggcctggaccaccgggtactccaggacca
attggggtttcgggaccagcaggaccaaaaggagaaaggggcagtaaaggagatcctgga
gttgtaggaccaatggggccagcagggcttcctggtttacaaggtctgcccggtgacaaa
ggaatccggggggagaggggcaagaaaggctctagagggtctaaaggggataagggagac
caaggagcgcctggattagatgcaccctgtccgttgggggaagacggccttccagttcaa
ggctgctggaataag
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