Chlamydotis macqueenii (Macqueen's bustard): 104476971
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Entry
104476971 CDS
T08437
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104476971 (WDR33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmac03019
]
104476971 (WDR33)
Messenger RNA biogenesis [BR:
cmac03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104476971 (WDR33)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_IFT122_1st
Collagen
eIF2A
WD40_RFWD3
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
104476971
NCBI-ProteinID:
XP_010115237
UniProt:
A0A091KJS7
LinkDB
All DBs
Position
Unknown
AA seq
1318 aa
AA seq
DB search
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIRYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKIAMEQEQMGKDESNDIEMTIPGLDWGMEE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPLPPPPEPLNDRKEDLKLEEKKKTQAE
IEQEMAALQYTNPQLLEQLKIERLAQKQAEQVQPPPPGGSLHGPQPFPGQGPMSQMPQGF
QQPLPPQQIPMNMPQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGAAGPQGFMGPQGPPGP
QGPPQGMPRPQDLHGHQGMQRHPGPHGPMGPPGPQGNAGPQGHLGPQGLPGSQTHLGPQG
PPGPQGHPGGQGMQGPPGPRGMQGPLPHGMQGAPGSQGMQGPISQGPLMGLNPRGMQGPP
GPRDNQGPAPQGMMMGHPQEMRGPHMQSGLLGHGPQEMRGLQGPPPQGTMLGPPQELRGP
PGPQGQQGPPQGSIVGPQGNMQGPQGQPNPSRGPHPSQGPLPFQQQKTPLLGDGPRPPFN
QDGQNPGPPPLIPGLGQQGGQGRLGPHNQGPGLNKGDSRGPPNHHMGPLSDRRHDQNSGG
PDHGPERGLFRGGQEWGDGRDSRGMPDRRGPHPDFHDDFDRPDDFRDDFHPDKRFGHRLR
EFEGRGGPPLQDEKWRRGGPGPPFPPDHREFEGGGSNRGPPGAWEGRRPSDDRYPRDPED
ARFRGRRDESFRRGGPSRHEGRGPRGRDAFPGPEDFGPDDAFDSSDENSRGRDHGVRGRG
RGALRGGRKGLLPTPDEFPRFEGGRKPDSWDGNREPGKKSGPRPDHPHDRHSPANRERSS
SLQGMDMASLPPRKRPWHDGPGTSDHREMDAPGGPPEERGKGRGNSGPSQRAPKSGRSSS
LDGDHHDGFHRDEAFGGGPAGGNNPSRGGRSGSNWGRGNNMNSGQSRRGASRGGGRGR
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atggccacagaaattggctccccgccccgatttttccatatgccgaggttccagcaccag
gcgcctcggcagttgttctacaaaagacctgattttgcacagcagcaagcaatgcaacag
cttacttttgatggaaagcggatgagaaaagctgtgaaccgaaagaccatagactacaat
ccctctgtaattagatatttggagaatagagtatggcagagagaccagcgagatatgcga
gcaatccagcctgatgcaggatattataatgacttggtccctcctattggaatgctgaac
aaccctatgaatgctgtaacaacgaaatttgttcggacatctactaataaagtaaaatgc
ccagtgtttgttgtcaggtggactcctgaggggagacgcttggtcactggtgcatctagt
ggagagttcaccttatggaatggactgactttcaattttgaaactatattgcaggcacac
gacagccctgtaagggctatgacttggtcacacaatgatatgtggatgctgacagcagac
cacgggggatatgtgaaatactggcagtccaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgacgacggcactgttagaatctgggactttctacgttgccatgaggagagaattctt
cgaggacatggagcagatgtgaaatgtgttgactggcatccaacaaagggattagttgta
tcgggaagtaaagatagccagcagcccatcaagttttgggatccaaagactggccagagc
cttgccacactacatgctcataaaaacacagtgatggaggtgaaactgaatctgaatggc
aactggctgctaacagcttctcgtgatcatctctgtaagctctttgacattcgtaatctg
aaagaagaacttcaggtcttcaggggtcataagaaggaggctacagctgtggcctggcat
cctgttcatgaagggctgtttgccagtggaggatctgatggctctttgttgttctggcat
gttggcgttgagaaggaggttggtggaatggaaatggcccatgagggaatgatttggagt
ctggcgtggcatccgcttggacacattctatgttcaggctcaaatgatcacactagcaag
ttttggactcgaaatcggcctggagataaaatgagagatcgttacaacttgaatctgctg
cctgggatgtcagaggatggtgtggaatatgatgatctggaacctaacagcctagcagtt
attcctgggatgggaatacctgaacaattgaaaatagccatggagcaagagcagatgggg
aaagacgagtccaacgatattgaaatgacaatcccaggactggattggggaatggaggaa
gtaatgcaaaaggaccaaaagaaggtgccacagaagaaagtaccctatgcaaaaccaata
ccagcacagtttcagcaggcatggatgcagaataaagttcctttgcctcccccacctgag
ccattgaatgatagaaaggaagaccttaagctggaggagaaaaagaagacacaggctgag
attgaacaggaaatggcagcacttcagtacacaaatccacaactcttggagcaattgaag
attgagagacttgcacaaaagcaagctgagcaagtgcagccaccacctccaggaggctct
cttcatggaccccagccttttccagggcaaggcccaatgtcacagatgcctcaaggattt
cagcaaccccttccacctcagcagataccaatgaatatgcctcagatgggacctcctggt
ccacaaggacaattcagacctccaggaccccaaggacaaatgggacctcagggtcctccg
ttacaccaaggagctgcaggtccacaagggttcatgggaccacaaggacctccaggcccc
caagggcctccgcaaggaatgccacggcctcaggatttacatgggcatcaaggaatgcag
agacatcctggccctcatgggccaatggggcctccaggtccacagggtaatgctggcccg
caaggccacttaggaccacagggtctgcctgggtctcaaactcatttaggaccacagggt
ccacctggcccacaaggtcaccctggtggtcaaggaatgcaagggccacctggtcctcga
ggaatgcaaggacctcttcctcatggcatgcaaggagctccaggatctcaagggatgcag
ggccctatatctcaagggcctttgatgggacttaatccaagagggatgcagggtccacca
ggacctagagataaccaaggacctgctccacaagggatgatgatgggtcatccacaggaa
atgagaggtcctcatatgcaaagtggtttactaggacatggtccccaggagatgaggggc
ctccagggacctccgcctcaaggtacaatgttaggaccgccacaagaattgcgtgggcca
ccaggtccacaaggccagcagggacctccacaaggctctatagtagggcctcaaggaaac
atgcaaggacctcagggacaaccgaacccttcaagggggccgcacccttcccagggccct
ctgcctttccagcagcagaaaacgcctctgttgggtgatgggcctcgtcctccgtttaat
caggacggacagaacccaggtcctccaccactgataccaggactggggcagcagggagga
caaggtcgtcttggccctcacaaccaaggacctggtcttaataaaggtgactcccgtggt
ccaccaaaccatcacatgggccctctctcagatagaaggcacgaccagaacagtggtggt
cctgatcatgggcctgagagagggttgtttcgaggtggccaggagtggggtgatggtaga
gacagcaggggcatgccagatagacgaggacctcacccagatttccatgatgactttgat
cgaccagatgacttccgtgacgacttccatccagataagagatttggccatcgattacgg
gaatttgaggggagaggaggcccaccattgcaagacgaaaaatggagacgaggtggacct
gggcctccctttcctcctgatcacagggaatttgaaggagggggttcaaaccgtgggcct
cctggtgcttgggaaggacggagaccttcagatgatagatatccacgggatcctgaggat
gcacggttccgaggaagacgagatgagagcttcagaagaggaggaccctcgagacacgag
ggccggggacccagggggagagatgcctttcctggccctgaagattttgggccagatgat
gcttttgactcttcagatgaaaactcaagaggaagggaccatggtgttcgggggcgaggt
cgtggtgctcttagaggaggccggaagggtttacttcctactccagatgaatttccacgc
tttgaaggagggcggaaaccagattcctgggatggaaacagagaaccaggtaaaaaatct
ggtcctcgtccagatcaccctcacgacaggcattctccagctaacagagaacgttcttct
tcgctccaaggcatggacatggcctcactgccaccacgtaaacgtccctggcatgatgga
ccagggacctctgaccacagagaaatggatgctccaggtggacctccagaggagaggggc
aaaggacgaggaaattcaggaccttcacagagagcgccaaaatctgggaggtctagttct
ttagatggagaccatcacgatggattccacagggatgaagcttttggtggaggccctgca
ggaggcaataacccttctcgaggaggaaggagtggaagtaattggggaagaggaaataac
atgaactctggtcaatcaagaagaggagcatctaggggtggtggaagaggccgatag
DBGET
integrated database retrieval system
