Chlamydotis macqueenii (Macqueen's bustard): 104477622
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Entry
104477622 CDS
T08437
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1
KO
K12828
splicing factor 3B subunit 1
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104477622 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmac03041
]
104477622 (SF3B1)
03036 Chromosome and associated proteins [BR:
cmac03036
]
104477622 (SF3B1)
Spliceosome [BR:
cmac03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
104477622 (SF3B1)
Complex B
104477622 (SF3B1)
Complex C
U2 SnRNP specific factors
104477622 (SF3B1)
Chromosome and associated proteins [BR:
cmac03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104477622 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
TALPID3
Motif
Other DBs
NCBI-GeneID:
104477622
NCBI-ProteinID:
XP_010116081
LinkDB
All DBs
Position
Unknown
AA seq
1318 aa
AA seq
DB search
MARALAKHRVDVVLAEKNAPKEGKNQYIEAQIREIQGKKPALDEAQGVGLDSTGYYDQEI
YGGSDSRFAGYVTSIAATELEDDDDDYPSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPF
AEHRPQKIADREDEYKKHRRMMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKE
EREIRQQLAEKAKAGELKVVNGAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPG
HTPSLRWDETPGRAKGSETPGATPGSKIWDPTPSHTPAGAATPGRDTPGHATPGHGGATS
SARKNRWDETPKTERDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQM
GGSTPVLTPGKTPIGTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDA
MFPEGYKVLPPPAGYVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPF
LKPDDIQYFDKLLVDVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREF
GAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDED
YYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLP
FLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISA
LAIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYT
REVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALD
RRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDH
KLEEQLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAK
VRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGM
HKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELL
KAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPF
TVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQ
TASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRM
LQYCLQGLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPRIYNDEKNTYIRYELDYIL
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atggcccgagctcttgctaagcaccgcgtcgacgtggtgcttgctgagaaaaatgccccg
aaggaagggaaaaaccagtatattgaagcacaaattcgagaaattcaaggaaaaaaacct
gctcttgatgaagcacaaggagtaggccttgattccaccggatattatgaccaagaaatt
tatggtggcagtgacagcaggtttgctggatacgtcacttctattgcagcaactgagttg
gaagatgatgatgatgactatccttctacaagtttgcttggccagaagaagccggggtac
catgctccagtggcattgcttaatgacataccgcagtctactgaacagtatgatcctttt
gcagaacaccgtcctcaaaagattgcagatcgggaagatgagtacaaaaagcacaggcgt
atgatgataatttcccctgagcgtcttgatccttttgcagatggagggaagacaccagat
cctaaaatgaatgccagaacgtacatggatgttatgcgtgaacagcatttaacgaaagaa
gagagggaaattaggcaacaactagctgaaaaggctaaagctggagagcttaaagtcgtc
aatggagctgcatctcagccaccttcaaaacgcaaacggcgttgggatcagacagctgat
cagactcctggtgctacacctaaaaaattatccagttgggatcaagcagagactcctgga
catacaccatctctgcggtgggatgaaactccaggccgtgcaaagggtagtgaaactcct
ggtgccacaccaggctcaaaaatatgggatccgactcccagtcacacaccagcaggagct
gcaacacccggacgggacacgcctggtcatgccacaccaggccacggaggtgccacttcc
agcgcacgtaaaaatcgatgggatgaaacacctaaaacagaaagagatactccgggacat
ggtagtggatgggctgagacgcctcgaacagacagaggtggtgactccattggtgagaca
ccaactccaggagcaagtaaaagaaagtcacgatgggatgaaacacctgctagccaaatg
ggtggcagcactcctgttctgacacctggcaaaacacccattggtacaccagctatgaac
atggcaactcctacaccaggtcatataatgagcatgactcctgaacagctgcaggcttgg
cgttgggagagggaaattgatgagagaaacagaccactttctgatgaagaattggatgct
atgtttccagaaggatataaggttcttcccccaccagcaggttatgtacctattcgcaca
ccagctcgtaagctgacagcaactccaacacctttgggtggtatgactggattccacatg
cagacggaagaccggactatgaagagtgttaatgaccagccatctggcaatcttccattc
ctaaaaccagatgatatccagtactttgataaactgctggttgatgttgatgaatcgact
ttgagtcctgaagaacagaaggagagaaaaataatgaaattacttctgaaaataaagaat
ggtacacctcccatgagaaaggctgcgttgcgacaaattactgataaagctcgggaattt
ggagcagggccattgtttaatcagattctgcctctgctgatgtctccaacgcttgaagat
caggagcgtcacttgcttgtcaaagtcatcgaccgaattctttacaaactggatgacttg
gtccgaccatatgtacacaagatccttgttgtcattgaaccactgctgattgatgaagac
tactatgctagagtggaaggcagagaaattatttcaaacttggctaaggctgctggtttg
gcaacaatgatctccacaatgcgacctgatattgataatatggatgaatatgtccgaaat
actacagctcgagcctttgctgttgttgcctctgctttgggcattccttctctgttaccc
ttcttgaaagctgtctgtaaaagcaaaaaatcctggcaagctaggcatactggcatcaag
atcgtacagcagattgctattcttatgggttgtgctatcctgcctcatctcaggagcttg
gttgaaattattgaacatggtttggtggatgagcagcagaaagttcgcaccatcagtgct
ttggctattgctgctttggctgaggcagctactccctatggtattgagtcatttgattct
gttctgaagcctctatggaagggtatccgtcagcacagaggaaagggtttggctgccttt
ttgaaggctattggttacctaattccacttatggatgctgagtatgcaaactattacacc
agagaagtcatgctaatccttatcagagagttccagtctcctgatgaagagatgaaaaaa
attgtgttgaaggtggtaaagcagtgttgtggtacggatggtgttgaagcaaactacatt
aaaactgaaatcttgccacctttttttaaacacttctggcagcacagaatggcattggac
agaagaaattacagacagctggttgatacaactgtggagctggcaaataaagttggagca
gcagaaattatttctagaattgtggatgatctgaaggatgaggctgagcagtacagaaaa
atggtcatggaaacaattgagaagataatgggaaacctaggggcagcagacattgatcat
aaactggaagaacagcttattgatggtatcttgtacgcctttcaggaacagaccacagag
gattctgtgatgctgaatggttttggcacagtggttaatgctctaggcaaaagagttaaa
ccctacttgccacaaatctgtggtacagttttgtggcgtttgaacaacaaatcagctaaa
gttaggcagcaggctgctgacctgatctctcgtactgcagttgtcatgaagacttgtcaa
gaggaaaaactgatgggacacttgggtgttgtgttgtatgagtacctgggtgaagaatat
cctgaagtactgggcagcatactcggagcgcttaaggctattgtgaatgttataggtatg
cacaagatgacgccaccaatcaaagatctgctgccacggcttacacctattttgaagaac
agacatgagaaagtacaggaaaattgtattgatcttgttgggcgcattgcagacagaggt
gcagaatatgtttctgcaagagaatggatgaggatctgctttgaactgcttgaattatta
aaagctcacaagaaagctatccgaagagccacagtgaacacttttggttatattgcaaaa
gctattggacctcacgatgtgttggctacactgctaaataacttgaaagtacaggaaagg
cagaacagagtatgtactacagtagcaattgctattgtagctgaaacatgctcacctttc
acagtgctgcctgcactcatgaatgaatacagagttccagaactgaacgtccagaatggt
gtgttaaaatctctttctttcctgtttgaatacattggagagatgggaaaagattacatt
tacgctgttacaccattgcttgaagatgctttaatggacagggatcttgtacacagacaa
acagccagtgctgtggtgcaacatatgtctcttggtgtttatgggtttggctgtgaagat
tctcttaatcatttgttaaattacgtttggcccaatgtgtttgaaacctctcctcacgtc
attcaggcagttatgggggctctggagggcctcagggttgctattggtccctgcagaatg
ttgcagtattgtttacagggtttgtttcaccctgccaggaaagtcagagatgtttattgg
aagatttataattcgatctacatcggatcacaggatgctctgatagcacattatccaaga
atctataacgatgaaaagaacacctatattcgttacgaacttgattacatcttataa
DBGET
integrated database retrieval system
