Chlamydotis macqueenii (Macqueen's bustard): 104477910
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Entry
104477910 CDS
T08437
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac03030
DNA replication
cmac03410
Base excision repair
cmac03420
Nucleotide excision repair
cmac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104477910 (RFC1)
03410 Base excision repair
104477910 (RFC1)
03420 Nucleotide excision repair
104477910 (RFC1)
03430 Mismatch repair
104477910 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmac03032
]
104477910 (RFC1)
03400 DNA repair and recombination proteins [BR:
cmac03400
]
104477910 (RFC1)
DNA replication proteins [BR:
cmac03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104477910 (RFC1)
DNA repair and recombination proteins [BR:
cmac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104477910 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
Rad17
AAA_14
BRCT_2
AAA_5
AAA_30
AAA_16
RuvB_N
RNA_helicase
AAA_18
AAA_17
AAA_7
AAA_33
nSTAND3
Zeta_toxin
AAA_19
NTPase_1
TIP49
Motif
Other DBs
NCBI-GeneID:
104477910
NCBI-ProteinID:
XP_010116426
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
SEEEVQSVKKSKKPSEKKAATPKLAKVLKQDPVVYISETDEDDEFVNKRVSLKPKENGTS
AIGCPATTVKKEDVKPRAKSRPLSPVKQTPTSALDYFGTNSVQRSEKKLVASKRKEPSQS
TDSTVDDEAIARQLQLEEDSELERQLHEDEEFAKTLAMLDETPQKKKPRKDSGGEQTLSI
KSSPNVTERHKQSEGVKATNSTGEAKNYTAKQHTKSEHSKGSRLSPQSSDGKIAREVTDK
TLPMKPSSKLLSLKQKEEIAEKERGAKSLVSKEKTASGKEVKTTPKKEKVSPKKTESVSP
EDSEKKRINYQAYRSFLNREGPKALGSKEIPQGAENCLEGLTFVITGVLECIERDEAKSL
IERYGGKVTGNVSKKTNYLVMGRDCGQSKREKASTLGTKVIDEDGLFDLIRTMPGKKSKY
ELAAETEGKKAESRPKRTPQKAEAGKRNFSPFKREADNKKNKSTPEKGDTIKSLKKETTA
VRKLLDFKRQTADKKEAPKPKGNSVSEINEDGTEKLLWVDKYKPVSLKAIIGQQGEQSCA
NKLLRWLRNWHKNTLEDGQAKSNKTGGKDDGTGFKAALLSGPPGVGKTTTASLVCKELGY
SYVELNASDTRSKNSLKEVVAESLDNTSIKDFCSGTSSSVSGKHVLIMDEVDGMAGNEDR
GGIQELIGLIRHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRLEQIKGAMMSIAFKE
GLKIPPPAMQEIILAANQDIRQVLHNLNMWCAKDKSLTYDEAKTDASRAKKDIRLGPFDV
VRKVFATGEESSRMSLIDKSDLFFHDYSLAPLFVQENYVHVKPAAAGGNLKKHLVLLSRA
ADSICDGDIVDRQIRSKQNWNLLPTQAIYASVLPGELMRGYMSQFPVFPSWLGKFSSTGK
HDRIIQELAMHMSLRTQTCKRTVNLEYLSYLRDALVQPLKDFGADGVQEAITFMDSYCLM
KEDTENIMEISTWGGKPSPFSKLDPKVKAAFTRAYNREAHLTPYSLNSAKTSKRQSGSAM
TLELSEDLNVEEIQSDEDEQDTVESDAMIK
NT seq
3152 nt
NT seq
+upstream
nt +downstream
nt
attcagaagaggaggtgcagtcagtgaaaaaatccaagaagccatctgagaaaaaagcag
ccactccaaaacttgctaaagttctaaagcaggatcctgttgtttatatttcagagacag
atgaagatgatgaatttgtcaataaaagggtttccctgaaaccgaaggagaatgggacat
cagcaattggttgtccagcaactacagtgaaaaaggaagatgtaaaaccacgagctaaaa
gcaggccattatctccagtgaaacagactcccacctcggcacttgattattttgggacaa
atagtgtccaacgatcagaaaagaaactggtagcaagtaaaaggaaagaaccttcacaaa
gcacagacagcacagtagatgatgaggccattgctaggcaactgcagcttgaagaagatt
cagagctggagagacagctgcatgaagatgaagaatttgctaaaactttggccatgttgg
atgaaactcctcagaagaaaaagcctcggaaagattcaggaggagagcaaacactgagca
tcaagagcagtcctaatgtgacagaaagacataagcagtcggaaggagtgaaagcaacaa
actcgacaggggaagcaaagaattacactgccaagcagcacactaaatctgaacattcaa
aagggtctcgtttgtccccacaatcatctgatggtaaaatagcaagagaggtgacagata
agaccttgcctatgaaacctagctctaagcttctgtctctgaaacaaaaagaagagattg
ctgaaaaggaaagaggtgctaaaagtttagtatcaaaagaaaaaactgcttcagggaaag
aagtgaagacaacaccgaagaaggagaaagtttctcccaagaagactgagtctgtaagtc
ccgaggactctgaaaagaagcgaatcaattatcaagcttaccgaagttttcttaatcgcg
agggtccgaaagcgttgggttccaaagagatacctcagggagctgaaaactgcttggaag
gcctgacatttgtaattacgggtgttctggagtgcattgaaagagatgaggccaaatctc
tgattgaacgttatggaggaaaagtaactggcaatgtcagcaagaaaacaaactatttgg
ttatggggcgagactgtggccaatctaaacgtgaaaaggcgtcaactttagggacaaagg
ttattgacgaggatggcctgtttgatcttattcgaactatgcccggcaaaaagtcgaaat
acgagctggcggctgaaacagagggaaagaaagcagagtcaagacctaaaaggacaccac
agaaagctgaagctggaaaaagaaattttagtcccttcaaaagagaagctgataataaaa
aaaataagtctactcctgaaaaaggagacaccatcaagtctcttaagaaagaaaccactg
ctgttcgaaagcttctggactttaaacggcaaactgcagacaagaaagaagccccaaaac
ctaaggggaactccgtttctgagattaatgaagatgggacagagaagttgctatgggtag
ataaatacaagcctgtatctcttaaggcaataattggacagcagggtgagcagagctgtg
ccaataaactgctccgatggctccgaaactggcataagaataccttggaagatggacaag
caaagagcaataaaactggcggcaaagatgatggtactggttttaaagcagcattacttt
ctggtccacctggagttggtaaaacaactacagcttctttggtttgtaaggaactggggt
atagctatgtggagctgaatgccagtgacactcgcagtaagaacagcctaaaggaagtag
ttgctgagtcgcttgacaacaccagcatcaaagacttctgttccggcacatcctcatcag
ttagcgggaaacatgtattgatcatggatgaagtggatggtatggcaggcaatgaagaca
gaggagggattcaggagctgattggtttgattagacacacaaagatacccatcatctgta
tgtgtaatgatcgcaaccatcctaaaattcgttccttggtccactactgttttgatcttc
gttttcagagacctcgtctggaacagattaagggtgctatgatgtctattgcatttaaag
aaggtttaaaaattccgccacctgctatgcaagagataatcctggcagcaaatcaggaca
tcagacaggttttacataatcttaatatgtggtgtgcaaaagataaatcactgacttacg
atgaggctaaaacggatgccagtagggccaaaaaggatatcagactgggcccttttgatg
ttgtccggaaggtttttgctactggagaggagtcttctcgtatgtctcttatagacaaat
ccgatcttttcttccatgattactccttagcacctctctttgtccaagagaactatgtac
atgtgaaaccagccgctgctggaggaaatctgaaaaagcacttggtgctcttgagtagag
cagctgatagtatatgtgatggtgatatagtggacagacagattcgtagcaagcaaaact
ggaatcttcttccgacacaggctatttatgcaagtgttctcccaggggagctgatgagag
gttacatgtcccagtttcctgtctttcccagctggctggggaaattttcatccacaggca
aacacgatcgtatcatccaagaactggcaatgcacatgagtctcagaacccagacgtgca
agaggacagtaaatctggagtatttgtcgtatttgcgggatgcgctcgtccagcccttga
aagactttggagcagatggtgtacaagaagctataacgttcatggactcctactgcttga
tgaaggaagatactgaaaatatcatggaaataagcacatggggaggcaaacccagtcctt
tttcaaagctggatcccaaggtcaaagcagcttttacacgtgcctacaacagagaggcac
atctgactccatattcacttaattctgccaagacatccaaaaggcagtcggggtctgcca
tgaccttagaactgagtgaagacctgaacgtggaagagatccagtctgatgaggatgagc
aagatactgttgaaagtgatgcaatgattaag
DBGET
integrated database retrieval system
