Chlamydotis macqueenii (Macqueen's bustard): 104478909
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Entry
104478909 CDS
T08437
Symbol
CCDC88A
Name
(RefSeq) girdin isoform X1
KO
K25392
girdin
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cmac03037
]
104478909 (CCDC88A)
Cilium and associated proteins [BR:
cmac03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
104478909 (CCDC88A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HOOK_N
APG6_N
HOOK
T4SS_LegC2C7
GAS
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
104478909
NCBI-ProteinID:
XP_010117708
LinkDB
All DBs
Position
Unknown
AA seq
1884 aa
AA seq
DB search
MENEIFTPLLEQFMSSPLVTWVKTFGPLAGGNGTNLEEYVALVDGVFLNEVMLQINPKSA
NQRINKKVNNDASLRIQNLSILVKQIKTYYQENLQQLIMMSLPNVLIIGKNPFSEPGTEE
IKKLLLLLLGCAVQCQKKEEFIERIQGLDFDTRAAVAAHIQEVTHNQENVFDLQWMDVIV
LTQEYVEPLLKNMTLHLKRLIDERDEHSETIIELSEERDCLRFLPHASAAQSPCGSPGMK
RTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQMEAELKRLQQENMNLLSD
ARSARVYRDELDALREKAIRVDKLESEVSRYKERLHDIEFYKARVEELKEDNQVLLETKT
MLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMTLEMAQKQ
SMDESLHLGWELEQINRTTELSEVPQKSLGHEVNELTSSRLLKLEMENQSLLKTVEELQS
AVGSVEGSSSRILKMEKENQRLSKKIEELENEISQEKQSLQNSQNLSKDLMKEKAQLEKT
LETLRENSERQIKLLEQENDHLNQTVASLRQRSQISAEARMKEIEKENKILHESIKETSS
KLNKIEFEKKQVRKELEHYKEKGERAEELENELHHLEKENELLQKKITNLKITCEKIEAL
EQENSDLEMENRKLKKTLDSLKNLTFQLESLEKENSQLDEENLELRRTIESLKCTNIKVA
QLQLENKELESEKEQLKKSLELMKASFKKTERLEVSYQGLDTENQRLQKALENSNKKIQQ
LESELQDLESENQTLQKNLEELKISSKRLEQLEKENKLLEQETSQLEKDKKQLEKENKRL
RQQAEIKDSTLEENNVKISNLEKENKSLFKEIVVYKESCVRLKELEKENKELVKRATIDK
KTLVTLREDLVNEKLKTQQMNNDLEKLAHELEKIGLNKERLLHDEQSSDDRYKLLESKLE
STLKKSLEIKEEKIAALEARLEESTNLNQQLRQELKTVKKNYEALKQRQEEERMVQNSPP
RSGEDNQSVNKWEKENQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNSN
LQAQILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSALENE
NECVLKEREDLKSLYDSLLKDHEKLEHLHERQASEYESLIAKHGSLKSAHKNLEVEHKDL
EDRYNQLLKQKVQLEELEKVLKTEQEKMLQQNEKHETVAAEYKKLCDENERLSHTYSQLS
RENEVLQTDHKNLKTLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLKG
NLEEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIM
DQYKFYEPSPPRRRGNWIALKMKKLIKSKKDVNRERLKSVTLVPTRSESSEGFLQLPHQD
SQDSSSVGSNSLEDGQTLGTKKSSMVALKRLPFLRNRPKEKDKMKAFYRRSMSMNDLVQS
MVLAGGQWTGSSEHLEGPDDISTGKRRKELGAMAFSTTAINFATVNSSTGFRSKQLLNNK
DTTSFEDVSPQGISDDSSTGSRVHASRPASLDSGRTSTSNSNNNASLHEVKAGAVNNQSR
PQSHSSGEFSLLHEHEAWSSSSSSPIQYLKGHTRSSPVLQQRTPEMLDGRGKRIKTGSPG
SEVVTLQQFLEESNKSTSSEMKSASEENLLDEVMKSLSESAELTGKEKLRKQPSAGCGIV
RSLSVKNTADFSDGRSIKPEQFGRPSLRKTEDIYFTSSPIKFTSGAQGKARLVKEKVQAT
VSQRQSRDCNPYATLPRASSVISTAEGTTRRTSIHDFLSKDSRQPVSVDPAPSTADGSVP
STSNVEAIPESRNSKSRSREQQSS
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgaaatattcacaccccttttggagcagttcatgtctagccctcttgtcacc
tgggttaagacatttggaccgttagctggaggaaatgggaccaacctggaagaatatgtg
gcgctagtggatggcgtgttcctgaacgaagtcatgctgcaaattaatccgaagtctgct
aatcagaggataaacaaaaaagtaaacaatgatgcttcattaaggattcaaaatctgtct
attttggtgaaacaaataaaaacttactatcaggagaatttgcagcagttgattatgatg
tctttgccaaatgtactaataataggaaaaaatcctttttctgagccaggtacagaagaa
ataaaaaaactcctcctgcttttacttgggtgtgcggttcagtgtcagaagaaagaagaa
tttattgaaaggatccaaggtctggattttgacacaagagctgctgttgcagcccatatt
caagaggtaactcataatcaggaaaatgtgtttgatctgcagtggatggatgtcattgta
ttgacacaagaatatgttgaacctctcttgaaaaatatgacgttacatttaaaaagactt
atagatgaaagagatgagcattcagagactatcatagaactctcggaagaacgagactgt
ctccgttttctacctcacgcatcggcagcacaatcaccttgtggatctcctggcatgaaa
cgcactgaaagcaggcagcacctgtcagtagagctagcagatgccaaagcaaagatcaga
aggcttaggcaagagctcgaggaaaagactgagcagttgcttgactgtaaacaagaactt
gaacagatggaagctgaactaaagagacttcagcaagaaaatatgaatttactttcagat
gcccgttctgccagagtgtatagagatgaattagatgcacttcgtgagaaggcaattcga
gtcgacaagcttgaaagtgaagtcagccgatataaagagaggctgcatgatatcgaattc
tacaaagctagagtggaggagttaaaggaagacaatcaagtgttgctagaaacaaagaca
atgttggaagatcaattagaggggacccgagcccgttctgataaattacatgagttagaa
aaagagaatctacaattaaaagctaaattacatgatatggagatggagcgtgatatggac
agaaagaagattgaggaactcatggaggaaaatatgactctagagatggctcagaaacaa
agtatggatgaatcgttgcatcttggctgggaacttgaacagataaataggactactgaa
ctttctgaagtgccacagaaatcgcttggtcatgaggtgaatgaactgacgtcaagcaga
ttactgaagctggaaatggaaaaccaaagtttgctgaagacagtggaagaactacaaagt
gcagtgggttctgtagaaggcagtagttcaaggattctgaaaatggaaaaagaaaaccaa
agacttagcaaaaagattgaagagctggagaatgaaattagccaagagaaacaaagtctt
cagaacagtcaaaatttgagtaaagatttgatgaaagaaaaagcacagcttgaaaaaaca
cttgaaacacttcgagaaaactcagagcgacaaattaagctattagaacaagaaaatgat
catttgaatcaaactgtagcttctctgagacaacgctcacaaatcagtgctgaagcgaga
atgaaagaaattgaaaaagaaaataaaatccttcatgagtctattaaagagaccagcagt
aagttaaataagattgaatttgaaaaaaaacaagtcaggaaagaactggaacactataaa
gagaaaggggagagagcagaagaacttgagaatgagctgcatcatctggagaaggaaaat
gaattattacagaaaaaaattactaacttaaaaatcacttgtgagaagatagaggcctta
gaacaagaaaactcagacctggaaatggaaaacagaaaactcaaaaaaactttggatagc
ctaaaaaatctcacttttcaattagaatccttagaaaaggagaattcacaactcgatgag
gaaaacttggaattaagaagaacaattgagtccttgaagtgtacaaacattaaagtggcg
cagttacaattagaaaataaggaactagagagtgaaaaggagcaacttaaaaaaagcctt
gaactcatgaaagcctcgtttaagaaaactgaacgcttggaagtcagttaccaaggccta
gacacagaaaatcagaggctacagaaagcccttgaaaacagcaataagaagattcagcaa
ttagaaagtgaattgcaagatttagagtctgaaaatcagactctgcaaaagaacttggaa
gagttaaaaatctctagtaagcgcctagagcaattggaaaaggagaataagttgttagaa
caagagacttctcaactggaaaaagataagaaacagctagaaaaagaaaacaaaaggctt
cgacaacaagcagaaattaaagatagtactttagaagaaaacaatgtaaaaattagtaat
ctggaaaaggaaaataaatctctatttaaagaaatagttgtctataaagagtcgtgtgta
cgcctgaaagaactagaaaaagaaaataaagaacttgtgaaaagagctactattgataag
aaaacccttgtcactttacgagaggacttggtgaatgaaaaattgaagactcaacaaatg
aacaatgatctagaaaaacttgcccatgaacttgaaaaaataggcttaaacaaggagcgt
ctcttgcatgatgaacagagcagtgatgacaggtacaagcttttggagtcaaaattagaa
tccacactgaagaagtctctcgaaataaaagaagaaaaaattgctgctttggaggctcgt
ttagaagagtcaacgaatttaaaccagcaactccgtcaggaacttaaaacagtgaaaaag
aactatgaagctctcaagcaaaggcaagaagaggaaaggatggttcagaattctcctcca
agaagtggagaagacaatcaatctgtcaataagtgggagaaggaaaatcaggaaactact
agagaattattgaaagttaaagatagattaatcgaagtagaaaggaataatgctacactg
caggcagagaagcaagcactgaagacacagttaaagcaacttgagacacagaatagcaat
ctgcaggctcagattcttgcacttcagagacagactgtttctctacaggaacaaaataca
actctacaaactcaaaatgccaagctgcaggttgaaaactccactcttaattctcaaagc
acatctcttatgaatcagaatgcacaactgttgatccagcagtctgctttagaaaatgag
aacgaatgtgtgctcaaggaacgtgaggatctgaaatcattgtatgattcacttctcaaa
gatcatgaaaagctggagcacctgcatgaacgccaggcttctgagtatgaatctctgatt
gctaaacatggaagtcttaaatctgcacacaaaaatctggaggtggagcataaggactta
gaagataggtacaatcagttgctgaaacagaaagtgcagctggaagaactggagaaagta
ctcaagacagaacaggagaaaatgctgcagcaaaatgaaaaacatgaaactgtagcagca
gagtataaaaaactttgtgatgaaaatgaaaggcttagtcatacatatagtcagctctcg
agagagaatgaagttcttcaaaccgatcataagaatttgaaaacattattgaacaattcc
aaactagaacaaacacgattagaagctgagttttctaaactcaaagaacagtaccaacaa
ctggatattacatctacaaaactaaataatcaatgtgagctgcttagccagcttaaagga
aatctggaggaggaaaacagacatctgctagatcaaattcagacactaatgctacagaat
agaacattacttgagcagaatatggaaagcaaggatctcttccatgtagagcaaaggcag
tacattgacaagctaaatgaattaagaagacagaaggagaaattggaggagaagataatg
gatcagtataagttttatgaaccatctccaccaagaagaaggggcaactggattgctctg
aaaatgaagaagctgataaaatctaagaaggatgttaatcgagaacgtttgaagtctgtg
acccttgtgcctacccgttcagagtccagtgaaggatttcttcagctgccccaccaggac
agtcaggatagttcctctgtgggctcaaactctcttgaagatggccagaccttggggacc
aaaaagagtagtatggttgcactgaaaagactgccctttttgaggaacagaccgaaggaa
aaagacaaaatgaaggccttctaccgtcgctccatgtccatgaatgacctggtgcagtcc
atggtcctagcaggaggacaatggacaggtagttctgagcatctggagggtcctgatgat
atatctacgggtaaaaggaggaaagaattgggagctatggccttctctactacagctatc
aactttgccactgtcaactcttctacaggcttcagatccaagcagttgctaaataataaa
gatactacatcctttgaagatgtaagtccccaaggtattagtgatgattctagtacagga
tcaagagttcatgcttccagaccagccagccttgatagtggcagaacatccactagcaat
agcaataacaatgcttcactccatgaagtcaaagcaggtgcggttaacaatcaaagcagg
ccgcagagtcacagcagtggtgaatttagtctgctacacgaacacgaggcttggtctagc
agcagcagcagccccattcagtatttgaaaggtcatacgaggtctagtcctgtgctccag
caaagaacacctgaaatgctggatggccgtggaaaacggatcaaaaccggttctcctgga
agtgaagttgttaccctgcaacagttcttagaagaaagcaacaagagtacctcaagcgag
atgaaatctgcaagtgaagagaatcttttagatgaagtcatgaaaagcttatctgagtct
gcagagctgacaggaaaggaaaagctaagaaaacagccatctgccggctgtggtattgtg
agatcattaagtgtaaaaaatacagctgacttctcagatggacgctccattaaaccagag
caattcggaaggcccagccttcgtaaaactgaagacatctactttactagctctccaatc
aaattcacatcaggcgctcaagggaaggccagattagttaaagaaaaggtacaagcaact
gtatcacagcgacaatcaagagattgcaatccttatgctaccttacctcgtgcaagcagc
gtgatttctacggcagaaggaactactcgaaggacgagcattcacgattttttgtctaag
gacagtaggcaacctgtatcagtcgatccagcaccatccaccgctgacggaagcgttcca
tcaacctccaatgtggaagctatcccagaaagcagaaattcaaaaagcaggtctagggag
caacaaagctcctaa
DBGET
integrated database retrieval system
