Chlamydotis macqueenii (Macqueen's bustard): 104479067
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Entry
104479067 CDS
T08437
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac03013
Nucleocytoplasmic transport
cmac03015
mRNA surveillance pathway
cmac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104479067 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
104479067 (NCBP1)
03015 mRNA surveillance pathway
104479067 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmac03019
]
104479067 (NCBP1)
03041 Spliceosome [BR:
cmac03041
]
104479067 (NCBP1)
Messenger RNA biogenesis [BR:
cmac03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
104479067 (NCBP1)
Spliceosome [BR:
cmac03041
]
Common components
Common spliceosomal components
Cap binding complex
104479067 (NCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Importin_rep_6
Vfa1
Motif
Other DBs
NCBI-GeneID:
104479067
NCBI-ProteinID:
XP_010117917
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
QPHKRRRTSEPSEIEERLESLICRVGEKSNSSLESNLEGLAGVLEADLPNYKSKILRILC
TVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKECLKVNMYNEAVHLVRFLSD
LVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRCDWYMFAFLSSLPWVGKELYEKKDAEMD
RLLSQTESYLKRRQKIHVPMLQVWTADKPHPQEEYLDCLWSQIQKLKKDRWQERHILRPY
LAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEGPVMPGSHSVERFV
IEENLHCIIKSHWKERKTCAAQLLSYPGNNKIPLNYHIVEVIFAELFQLPSPPHIEVMYT
TLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHHLSNFQFRWSWEDW
SDCLTQDLEKPKPKFVREVLEKCMRLSYHQRIIDIVPASFSVLSPANPVCIYKYGDESNR
SLPGYTVALCLTIAIKNKASNDEIFSILKDVPNPNQDDDDDEGFTFNPLKIEVFVQTLLH
LAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVVYEVWKNHPQMIAVLVDKMIRTQI
VDCAAVANWIFSSELAHDFTRFYIWEILHSTIRKMNKHVLKIHKELEETKARLARQHKRR
DSDDDDDDDDRSSDREDGPLEEQIERLQEKVESAQSEQKNLFLVIFQRFIMLLTEHLVRC
ETGGIDVFTPWYKSCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDHHILAVFQQFCAL
QA
NT seq
2351 nt
NT seq
+upstream
nt +downstream
nt
ggcagccccacaagaggcggaggacgtctgagccgtcggagatcgaggagaggctcgagt
cgctcatctgcagggtgggagagaagagcaactcatctttggagagcaacttggagggcc
tagctggtgttttggaagctgatctacccaattacaaaagcaagatactaagaatactgt
gtactgttgcacgtctgttaccagagaagcttactgtttacacgacactagttgggttgc
tgaatgccaggaactacaattttggtggggaatttgtagaagccatgattcgtcagctta
aagaatgtctcaaagtcaatatgtataatgaagccgtgcatttagttcgttttctgtctg
atcttgtgaattgtcacgtaatagccgcaccttccatggtagctatgtttgagaactttg
tgagtgtaacacaggaggaagatgtaccccaagtacgatgtgactggtatatgtttgcat
ttctgtcatctttgccttgggttggaaaggagttatatgagaaaaaggatgctgaaatgg
atcgtctcctgtctcagacagaaagctatttgaaacgccgccagaagattcatgtaccca
tgctacaagtttggactgctgataaaccacatccacaagaagagtatttagactgccttt
ggtctcagattcagaagttgaaaaaagatcgttggcaagaacgacatattctgaggccgt
acttggcttttgacagcattctttgtgaagcgctgcaacacaatctgcctccgttcactc
ctccgcctcacaccgaagattcagtgtacccaatgccaagggttatttttaggatgtttg
actacacagatgaccccgagggccctgtcatgcctggcagccactctgttgaacgatttg
taatagaagagaaccttcactgcatcatcaaatcccactggaaagagagaaagacttgtg
ctgcacagctcttgagctatccaggaaataacaagatccccttgaactaccacatagtag
aggtaatatttgcggaattgtttcagcttccatctccaccacacattgaagtcatgtaca
caacgctgctgattgaactgtgcaaacttcagcctggctctttaccacaagttcttgcac
aagccacagaaatgctctacatgcgtttggatacaatgaatacgacatgtgtggacagat
ttattaactggttttctcaccacttgagcaacttccagttccgttggagctgggaagatt
ggtcagattgtcttactcaggaccttgaaaagcccaaacccaaatttgtgagagaggttt
tggaaaagtgcatgcgactctcctaccatcagcgtataatagatattgttcctgcaagtt
tttctgtgctcagtcctgctaatccagtgtgcatttacaaatatggagatgaaagtaata
ggtctcttcctggatatactgtggcactctgtttaacaattgcaattaaaaataaggcca
gtaatgatgaaatcttcagcattttgaaagatgtgcctaatccaaaccaggatgatgatg
atgatgaaggatttaccttcaaccctctgaaaatagaagtctttgttcagactctgctcc
atctagccgcaaagtctttcagccactccttcagtgccctggcaaagtttcatgaagtct
tcaaaacacttgctgaaagtgacgaggggaaactccatgttctgagggttgtatatgagg
tttggaagaatcatccacagatgattgctgtgcttgtggacaagatgattcggacacaaa
ttgttgattgtgctgcagtagcaaactggatcttctcttcagagcttgcacatgatttta
ctaggttttatatctgggagatcttacattccacaattcgtaagatgaataaacatgttc
tgaagattcacaaagaactggaggagactaaggcaaggttggccaggcagcacaaaagac
gagacagtgatgatgatgacgatgatgatgaccgaagcagtgatcgggaggatggaccgc
tagaagagcagatagagcgcttgcaggagaaagtagagtcagcccagagcgaacagaaga
atctcttccttgttatattccagcgtttcattatgttgttaactgagcacttagtgcgct
gtgagactggtggaattgatgtatttacaccttggtacaagagctgtatagagaggttgc
agcagatcttcctgcagcatcaccagataatccagcagtacatggtgaccctagagaatc
tcctgtttacggctgaactggaccaccacatactggctgtgtttcagcagttctgtgctc
tgcaggcctga
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