Chlamydotis macqueenii (Macqueen's bustard): 104479107
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Entry
104479107 CDS
T08437
Symbol
PKD1
Name
(RefSeq) LOW QUALITY PROTEIN: polycystin-1
KO
K04985
polycystin 1
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cmac03037
]
104479107 (PKD1)
04812 Cytoskeleton proteins [BR:
cmac04812
]
104479107 (PKD1)
04040 Ion channels [BR:
cmac04040
]
104479107 (PKD1)
04091 Lectins [BR:
cmac04091
]
104479107 (PKD1)
Cilium and associated proteins [BR:
cmac03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
104479107 (PKD1)
Cytoskeleton proteins [BR:
cmac04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
104479107 (PKD1)
Ion channels [BR:
cmac04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104479107 (PKD1)
Lectins [BR:
cmac04091
]
C-Type lectins
Others
104479107 (PKD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD
REJ
PKD_4
LRR_8
Lectin_C
Y_Y_Y
WSC
LRR_4
GPS
Motif
Other DBs
NCBI-GeneID:
104479107
NCBI-ProteinID:
XP_010117965
LinkDB
All DBs
Position
Unknown
AA seq
3114 aa
AA seq
DB search
MSRASSGPCQVLVTCVAQKEISLAVFAAGLSRHPRWDELLVALRYARLWRGDLSNNKIGG
LDVQTFESLTSLAKLDISHNKISTLEDGIFDNLFNLSEINLSWNPFVCDCKLSWLPRWVE
DRSVKVIQASDTRCAHPPEVANLSLFDVSFVNASCGAQYITCLTSNHTEEAELVILFTSV
HPGNLTEETCSALCYAEDQEYGGFSPHGQCLCGTAHETNSSSDCLPFCTEHLSGQTCDGP
SLIPSPFQAQLPVAFTGLQPRYSLHQAVLFNISIPIAVSTLLWEFGDQTEVLNTTGNTVV
HMYALPGQYNVTATIFVGTKVLYVQAEVEVVASPQQLELQCPSLVKTNESLDIRIRNRGG
TGLAVLYGITAEAGELGRAVHPMCPPDGLVFPGNNHCYQLVVEKAEWLEAQHHCQEHGNG
ELAFVSSPEIQSFLVAHVIRSLDVWIGFNDFASTGAQQRGEGFNLESCQNWLPGEPHPSN
ADHCVRMGPTGQCNTDLCMAKHSYVCEYKPKGVLLNAENFFVGDPVFHTHEAVKNVTEDV
QSAPWQAVEVMVFPELAFRHEGYLTALEFVTQELHQPVQVRFQVLRPIDGEDYQEGENAT
EPFHTPQDDGNGTLLECPPGFQWCPLTNLCLSLNNCCNATECANSSLASSPTHVSLQRNE
SQLSYELIKEFLFTIPAGPSSQYLVTFRKENLFVNVEDIFSIQHNAGSGLLLQCQPSTTS
PYRTNVLSTNSSEWALGLSNGSVGAAWINSTVCSLRVRYAEEQLVPVISPNNAGLEHPGH
YTVRASVDNGFFTANLSCSFWVTSWVSGLRVIHPAPQGGKVYLPSNHTTLVVKLSSGVNA
TARWLEDNHTFPFEGSCPTAVAPLTADCARETNDTWFAVVSLSGLGEGMSTHVLVAENAV
SSQNITITVKVEEPIRGLRATPDPEXXXXXXXXXXLNTRVSYVPVMEAGSDVTFRWTVDD
KPSFTFYNVVFNVIYQSPAVYKLSLTASNHVSNFTVNYNVTVEMRNKMKNLTVLGVLPVL
PQNSTMELTARVQVDSAVDALFLWDFGDGVQETYLFKPPYNKSFLVPDPSVHEVVIENNV
SHVYQDPGEYTLVVLVSNQFENLTHLTPVHVHSYLIDVKVEAEEDVLVVSRPVTFRADPL
PSPYGVVYTWDFGDGSSLFTGSQPTVTYSYPRRGVYNVTVTANNTVSSVEAVECYQVFEE
ITGLRVSADEAAELGASVTLNASVQTGDSITWIFDMGDGTVLRSQVPVVEHVYIKDINCT
VNVTAVNAVNSVSQAVPVRIFVLEVLKIEPTSCILEHPDVQLTAYVTGDPGEYIFDWTFG
DGSSNVTISGDPVVMHNFTRSGTFPLSLTLSSRFNKAHYFTSVCVEPEIVNVTLLPSKQF
VRLGEESSFQVSAVPLYQYRYRWDFGNNESTRSSGTEVTYTYKNTGVFLVTVTVSNNVSF
NNDTAFVEVQEPVGVAKIEYNGTDVLELNQIYLFSASMNGTKVSYCWDFGDGTTQPGQIA
AHSYNSTGHYSISVMGRNDVSFNETVIDVTVKRRLHGLTINASRTVVPLNGSVSFVATLL
AGSAIRYSWILCDRCTPIQGSSTISYTFRSVGTFNVIVTAENKISSLQDSIYVYVLEQIE
GLQVAGGDLVEDVYFPTNKTLHLQAVVREGTNISYSWVVQRGGSAVQTFTGKTISLSVLE
AGNYTVYLKATNMLGSATANRTLEFMESVGLLKPYAFPNPAAVNASVNISTTITSGTGIT
YVWYLEDGFSPVTSEPFIIHSFQSPGVTEVTVGAENKLGSTNATIYICAEEVIEGLSIGT
AELDCRYVSSGSTVVFEGELQRGTEVTWLWEVPNGTLTGQSVAVTFPTAGFYTVYLNASN
DVSWARASRNISVLDRIQGLEVLASKKVVEPGEQVTFVIRMLSGTSVSYLVSISGDYSVV
LNGSKYTHEFTKSGDYLVTVTVQNQISIAHAQVLISVLEAIRDVRLLNCCEEGIPTGMEK
SFSAQVGSGSRVSFSWQFSLWKEEGRSVVTVAGESVSYTPEAAGLLEIHLIAFNDLGGVN
ITRTIQVQDLIVQVSLTASNAFVNRTALFEAAVVPSSRSVEFLWTFGDGSSPQTTKVAVA
NYSYLSPGDYLVEVNATNLISFFVAHLTVTVKVLECEEPEVELALPPQVVMKRSQRNYLE
AQIDLRGCFKYQTEHLWEIYRAPSCLNLDDSSRIRLPNVDVNRPQLVIPKLALEVGNYCF
IFIVSFGDTPLSKSIFANVSVIPSKLVPIIDGGSYRVWSNTQDLILDGGKSYDPNLDDGE
QTPLFPRWHCTARSQSSAAGCSLNFSAKEGIVTISKAVLEADVEYTFDLTVRKEGMSPEA
TNQTVFIKRGGVPIVSLECVSCKAQSVYEVSKSSYVYLEGTCQNCHNDSKLGRWAAHSFK
NKSLILDKKTTSTGDTGMNLVLRQGALRDGEGYTFTLHITDLTTGEEGFASIDLLPNQPP
VGGSCRLSPKGPLRALMAKVHFECAGWRDTEDAEGPLVYILLVSRRRDGHYHEFCVYKGS
RAEHSAFLPPGFHESGFMVSVSVLVQDQLGATVVAINRSMEIGLPEGFPSLSHWLYNQTD
TVLQGLVKQGDPQQVIEYSLALITILNEYEQSVLLESETGNEFELRTWTRNNITETLNSL
KVNTVDDIQQISAALAQCTVVSKELVCKSCLTRTLNKLETMMTILQGEMTQGTVTPTGIA
DNILNITGDLIHLVNTVSQESKPQELLADSHNLLLAPKAYNLSSSLMRILMKSRVLNEEP
LELVGGEIKATGKRSDPFNLLCYENTPNCQFSIPQAFNTTLSNLTDVIQVMFQVDSNPFP
FGYISNYTVSTKVASMEFQTHNGVQIPIGSLDSEKAITVMVSNNTDADNLSAGTETIEPR
TSVNLIVTMESNNREAGLHFQLTYRVLNDHYIASEPEPFIMAYLHHEPEPNEHNCSASKK
IGLDALSGSDHKLYTFFTSPRTDDTIQKYYFNITNHFSWSPVEVTLGLYTSLCQYFSEQE
KRWKTEGIIPLEETRPDQAVCLTQHLTAFGASLFVPPNSVQFIFPVSKTPRSLGQIVVSS
REAWGCRWPPVQAASQQTCAQLANQREHLSLRELRGAHLAEGLRPLIARPGCCC
NT seq
9345 nt
NT seq
+upstream
nt +downstream
nt
atgtccagggccagctccggtccctgccaggtcctggtcacttgtgtggctcagaaggag
atttcgctggcggtgtttgcagctggtctctcccggcaccctcggtgggacgagctgctg
gtggccctgcgctacgcgcggctctggagaggggatctctccaataacaagattggtggt
ttagatgtgcagacgttcgaaagcctgacttctctggcaaaactagatataagccacaac
aagatttctacattagaagatggaatatttgataatttatttaatttaagtgaaataaac
ttaagttggaatccatttgtttgtgactgcaaactctcctggttgccccgttgggtggaa
gacagaagcgtgaaagttattcaggcgtcagatacgagatgcgcccaccctcctgaggtg
gccaacctttccctcttcgatgtctcgttcgtcaacgctagttgcggagctcaatacata
acgtgtctgacaagcaaccacacagaagaggctgaacttgtcatcctcttcacgtctgtt
caccctgggaacctcactgaggagacctgcagtgccctctgctacgccgaagaccaggag
tatggaggcttcagcccccacgggcagtgtttgtgtggtactgcccatgaaacaaactct
tcctccgattgtttgccattttgcactgagcatttgtccgggcagacctgtgatggccca
tccctcatcccctctcccttccaggcacagctgcctgtggctttcacaggactccagccc
cggtacagcctacaccaggccgtgctcttcaacatcagtattcccattgctgtcagcact
ttactgtgggaatttggggaccagacagaggttctcaacaccactggaaatacagttgtc
cacatgtacgccttacctgggcagtacaatgtcactgccaccatctttgtgggcaccaag
gtcttgtacgtgcaggcagaagttgaggtggtggcttcaccccaacagttagaactgcaa
tgtccttctttggtcaagacgaatgagagtctggacatacggatccgcaacagaggtggc
actggcctcgcggtgttgtacgggatcaccgcagaggctggagagctgggcagagcagtt
caccccatgtgtccccccgacggcttggttttcccgggcaataaccactgctaccagctg
gtggtggagaaggcggagtggctggaggcccagcaccactgccaggagcacggcaacgga
gagctggcttttgtgagcagccccgagatccagagcttcctggtcgctcatgtcatcagg
agcctcgatgtctggattggattcaatgattttgcaagcactggagcgcagcagagaggc
gaaggatttaatctggagagctgtcagaactggctgccgggagagccccatccgtccaac
gctgaccactgtgtccggatgggcccaacgggccagtgcaacaccgacctgtgcatggcc
aagcacagctacgtctgcgagtacaagcccaaaggagttctcttaaatgctgaaaacttc
tttgtgggagaccctgtgttccacacgcacgaggctgtgaaaaatgtgacagaagatgtg
cagtcagctccgtggcaggctgtggaggtgatggtgttccctgagctggcgttcaggcat
gagggatatttgactgccctggagtttgtgacacaggaactgcatcagcccgttcaagtg
aggttccaggtgcttagaccgatagatggagaagactaccaggagggagaaaatgccaca
gaaccattccacactcctcaggatgatgggaacgggactctacttgaatgtcctcctggt
ttccagtggtgccctttgactaacttgtgcttgtcactgaacaactgctgcaacgcgacc
gagtgtgccaacagttctcttgccagcagccctacccatgtttcccttcagcgcaacgaa
agccagctcagctatgaactcatcaaggaattcctgtttacaataccagccggcccttct
tcccagtacctggtcacattcagaaaagaaaatctttttgtgaatgttgaggacatcttt
agtatccagcacaatgcaggctcgggcttactcctccagtgccagcccagtaccacatcc
ccttacagaaccaacgtcttaagcacgaactcttcagagtgggcacttggcctgtccaac
ggctccgtcggtgccgcctggatcaacagcactgtttgctctctccgtgttcgctacgcc
gaggagcagctggtcccggtgatcagccctaacaacgcagggctggagcatccgggtcac
tacacggtcagagccagtgtggacaacgggtttttcactgccaatctttcctgcagtttc
tgggtgacttcctgggtgtcaggcctgcgtgtcatccaccccgctcctcaaggcggcaag
gtctacctgccatccaaccacaccactctggttgtgaagctttcctcaggggtgaacgcg
acagctcgctggctggaggacaaccacaccttcccctttgaggggtcctgccctacggct
gtggcaccgctgacggcagactgtgccagggagaccaacgacacctggtttgctgtggtc
agcctgagcggcctcggggaggggatgagcacccatgtgctggttgcggagaacgcagtg
agctcccagaacatcaccatcacagtgaaagtggaggagcccatccgcgggctgcgggcc
actcctgaccctgagcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctgaacacacgagtg
agctacgtccctgtgatggaagctgggtcagatgtgactttccgatggacagtagatgat
aagccatctttcactttttacaatgttgtcttcaacgttatctaccaaagcccagctgtg
tacaagctttcgctcactgcctccaaccacgtcagtaactttacggttaattacaatgtc
acggtggagatgaggaataagatgaagaacctgactgtgttgggtgtcctgccggtcctc
cctcagaacagcaccatggagctgacagcgagagttcaggtcgattcagctgtggatgct
ctgttcctgtgggattttggagatggtgtccaagagacatacctgtttaaacctccctac
aacaagtctttccttgttcctgatcccagtgtccatgaggttgtaatcgagaacaacgtt
tcgcacgtctatcaagacccaggtgaatacacactggtggttcttgtgtcaaaccagttt
gagaacctcacccacttgaccccagttcacgtccacagttacctgattgacgtgaaagtg
gaagcagaggaggatgttttagttgtgagccgtccagtcaccttcagggccgaccctctg
ccgtctccttatggtgtcgtgtacacctgggactttggggatgggtcctcgctgttcaca
gggagccagcctaccgtgacgtacagctaccccaggagaggggtgtacaacgtcaccgtg
acggccaacaataccgtaagcagtgtggaggcagttgagtgctaccaagtgtttgaagag
atcactgggctccgtgtttccgcagatgaggcagcagagctgggagcgtctgtgaccctc
aatgcctcggtgcagacgggggacagcatcacctggatatttgatatgggggacgggacg
gtgctgaggagtcaggtgccggtggtggaacacgtctacataaaggacatcaactgcacg
gtgaacgtgacggctgtgaatgctgtgaactcggtctcccaagctgtgcctgttcggatc
tttgtcctggaagtactcaaaatagagcccacttcttgcatccttgagcacccggatgtg
cagctcactgcgtatgtgacgggggatcctggtgaatacatctttgattggacttttgga
gacggctcgtccaacgtcaccatcagcggggaccctgtggtgatgcacaacttcacccgc
agtgggacgttccccctctccttgaccctctcaagcaggttcaacaaggctcactatttc
accagcgtctgcgtggagccggagatcgtcaatgtcacccttctcccttccaagcagttc
gtgaggcttggtgaagagagcagcttccaggtcagtgccgtgcctctctaccagtaccgc
taccgctgggattttgggaacaacgagtccaccagatcgagtggcactgaagtgacctac
acctacaagaacacaggggtcttcctggtcacggtgacagtctccaacaatgtctctttc
aacaatgacacggcgttcgtggaagtccaggagccagttggggtagcaaagattgaatat
aacgggacagatgttctggagctgaaccagatctacctgttctctgccagcatgaacgga
accaaagtgagttactgctgggactttggagatggcactacccagcctgggcaaatcgct
gcgcactcctacaacagcacgggccactacagtattagtgtgatgggccggaatgacgtg
agctttaacgagactgtcatcgacgtcacagtgaaacgccggctccacgggcttaccatc
aatgccagcaggacagtggtgccgttaaacggttcggtgagttttgtagccacgcttcta
gctggcagtgccatccgctactcgtggatcctttgtgaccggtgcactcccatccaaggc
tcctccacaatctcctacaccttccgctctgtgggcacattcaatgtcattgtgacagcg
gagaacaagatcagctcgttgcaggacagcatttacgtctacgtgctggagcagattgaa
ggcctgcaggtggctggcggtgacctggtggaggacgtctatttcccaactaacaaaaca
ctccatctgcaggcggtggtgagagaggggacaaacatctcttacagctgggtggtccaa
aggggcggcagtgctgtgcagaccttcactgggaaaaccatctccttgagcgtcctagaa
gctggaaactacactgtctatctgaaagccactaacatgctggggagcgcgactgctaac
aggacgctggagttcatggaaagcgttgggcttctgaagccttatgccttccccaaccca
gctgctgttaacgcctctgttaacataagtaccaccataaccagcggcaccggcatcacc
tatgtttggtacctagaggatggcttctctcctgttacctccgaaccctttattatacac
tccttccaaagccctggagtaacagaggtcaccgttggagcagaaaacaagctaggttca
accaatgcaacaatttatatctgcgcagaggaggtcatagaggggctgagcatagggact
gcggagctggactgtaggtatgtctcctcaggctccacggtggtctttgagggggagctg
cagagagggactgaagtgacatggctttgggaggtgccaaacggcacattgaccggccag
tccgtggcagtcacgttccccaccgcggggttttatacagtctatctgaatgcatcgaat
gacgtcagctgggctcgcgccagcaggaacatctcagtgctggacaggattcaaggactg
gaggttcttgccagcaagaaggtggtggagccaggggagcaggtcacctttgtgatcagg
atgttgtcgggtacctctgtgagttacttggtgagcatcagtggagactactctgtggtg
ctcaacgggtccaagtacacgcatgagttcaccaaaagcggtgattatttggtgaccgtg
acagtgcagaaccaaatcagcatcgcacacgcccaggtgctcatctctgtcctggaggcc
atccgcgacgtcaggctcctgaactgctgtgaggaaggcatacccacgggcatggagaag
agcttcagtgcccaggtggggagcggctcccgtgtgtcattctcctggcaattctccctc
tggaaagaggaaggccgatccgtggtcactgtggcaggagagagtgtttcgtacactcca
gaagctgctgggctgctcgagattcacctcattgccttcaacgacttgggaggtgtcaat
atcaccagaaccatccaggtccaagacctgatagtccaggtttccctcactgcctccaat
gcctttgtcaacaggacagcactgtttgaagcagcagtggtgcccagcagcagaagcgtt
gagttcttgtggacctttggggatggctcttcccctcaaacgaccaaggttgcagtggcc
aactattcttacctgagccctggggattacctggtggaggtgaatgccaccaatctcatc
agcttcttcgtagcccacctcactgtcactgtcaaagtcctggagtgtgaggagccagag
gtggagttagccttgccccctcaagtagtcatgaagcggtcccagaggaactacctggag
gcacagatcgacctccgaggatgcttcaagtaccagacggagcacctctgggagatctac
cgagcacccagctgcttgaacctggatgactccagcaggatccgtctgccgaatgttgat
gtgaacaggccccagctagtgataccgaagcttgccctggaagttgggaactattgcttc
atcttcattgtctcctttggagacaccccgctgtccaaaagcatctttgccaatgtatct
gtgataccaagtaagctggtcccaatcatcgacggggggtcgtaccgtgtgtggtccaac
actcaggacttaatcttggatggggggaagtcctatgacccgaacttggatgacggcgaa
cagactccattgttcccgcggtggcattgcacagcccgatcgcagagctcggctgcaggg
tgctctctgaatttcagtgccaaggaaggaattgtcacaatttccaaagctgtattagaa
gcagatgtggagtacacgttcgacctcaccgtccggaaggagggcatgagtcccgaggcg
acaaatcaaaccgtgttcatcaagagggggggagtccccattgtgtccctggagtgcgtt
tcctgcaaggctcagtctgtctatgaagttagcaagagctcctatgtctacctggagggg
acctgccagaactgtcacaatgactccaagcttgggagatgggcggcacacagctttaaa
aacaagtctctcatcctggacaaaaaaaccacctccactggcgacacgggcatgaacctg
gtgctgaggcaaggggcgctgagggacggggaggggtacaccttcaccctccacatcacc
gacctcacgacgggggaggaaggcttcgcctccatcgacctgctcccaaaccagccgccc
gtgggaggatcctgccggctgtctcccaaaggaccgctccgggcgctgatggcaaaggtg
cacttcgagtgtgcaggctggcgagacacggaggacgcggagggcccgctggtgtacatc
ctcctggtgtcacgccgcagggacgggcactaccacgagttctgcgtgtacaagggcagc
cgtgccgagcacagcgccttcctgcccccgggctttcacgagagcggcttcatggtgtcc
gtgtcagtcctcgttcaggaccagctgggagccaccgtggtggccatcaaccgctccatg
gagatcggcttacccgaggggttccccagcctctcccactggctctacaatcaaactgac
accgtgctccagggcttagtgaaacaaggggacccccaacaggtcattgagtactctctg
gccctcatcaccatcttaaatgagtacgagcagtccgtgcttctggaatctgagactggg
aatgagtttgaactccggacctggactcgcaacaatatcacagaaacgctgaactcgctg
aaggtgaacacagtggatgacatccagcagatctcagctgccttggcacagtgcacggtg
gtgagcaaggaactggtttgcaagtcgtgcctgacaaggaccctgaacaagctggagacc
atgatgaccattctgcaaggggaaatgacacagggcactgtgacaccaaccggcatcgcc
gacaacatcctcaacatcacaggtgacctcattcaccttgtcaatacagtttcacaagaa
tccaagccccaggagctgctcgccgattcccacaatttgctgctagctcccaaagcctac
aacctgtcttccagcctgatgcgcatcctcatgaagtctcgagtgctgaatgaagagccc
ctcgagctggtgggaggagagattaaggccacaggcaagcggtctgatccctttaacttg
ctttgctacgaaaacacaccgaactgccagttctccatcccccaggcgttcaacaccacc
ctttccaacctgacggatgtcattcaagtcatgttccaggtggactccaaccctttccct
tttggctacatcagcaactacaccgtgtccacgaaggttgcctccatggagtttcagaca
cacaacggggtgcagatccccatcgggagcctggactcggagaaagccatcaccgtaatg
gtgtcaaacaacacagatgctgacaatctctctgctggcaccgaaaccatcgagccaaga
acgtctgtgaacctgattgtgactatggagagcaacaacagagaagcagggctgcacttc
cagctcacttacagagtcctgaacgatcactacattgccagcgagcctgagcccttcatc
atggcttacctccatcacgagccagagcccaacgagcacaactgcagtgcctctaagaaa
attggcctggatgctctgtctggaagcgaccacaagctctacaccttcttcacctcaccc
agaactgacgacaccatccagaaatactacttcaacatcacgaaccatttcagctggtcc
ccggtggaggtgactctggggctgtacacctccctctgccagtacttcagcgagcaggag
aaacggtggaagacagaaggcatcatcccgctggaggagaccaggccggaccaggctgtg
tgcttaacccagcacctcaccgcctttggggccagcctgtttgtacccccaaactccgtc
cagttcatcttccctgtgagtaaaacaccgcggagcctgggacagattgttgtcagctcg
agggaagcctggggctgccgttggcctcctgttcaggctgcgtcgcagcagacctgtgcc
cagctggcaaaccagcgcgagcacctgagccttcgggagctgcgaggggcacacctcgca
gaggggctgcggcctctgattgcgcgtcctggctgctgctgctga
DBGET
integrated database retrieval system
