Chlamydotis macqueenii (Macqueen's bustard): 104479182
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Entry
104479182 CDS
T08437
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104479182 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmac03019
]
104479182 (EDC4)
Messenger RNA biogenesis [BR:
cmac03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104479182 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
104479182 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
WD40_CDC20-Fz
Beta-prop_HPS5
Beta-prop_TEP1_2nd
WD40_Prp19
WDR55
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
104479182
NCBI-ProteinID:
XP_010118064
LinkDB
All DBs
Position
Unknown
AA seq
1373 aa
AA seq
DB search
SVNENQRPSNSYNGDLNGLLVPDPIVAGDGPSLAKPVHRSISLGALQEKQVICLSGDDSS
TCVVISAKDVEIVASSDSSITSKARGSNKVKIQPVARYDWEQKYYYGNLIAVSNSYLAYA
IRAASNGSAMVRVLSVSTAERTLLKGFTGGVADLAFAHLNSNQLACLDEAGNLFVWRLAM
DKEKIQEEILVNIKRPDNTPLNTSRRIIWCPFIPDDNEESGEEGSQTLALLHEDRAEVWD
LDIIRTNNSSWPVEVPSIKEGFIVVKGHSTCLSEGALSPDGTVLATASHDGFVKFWQIYI
EGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQDPEVPFWRFLITGADQNRELKMWCTVSW
TCLQTVRFSPDIFSSMSILPSLKVCLDLSAEYLILSDVQRKVLYVMELMQNQEEGKAYFS
SISEFLLTHPVLSFGIQAVSRCRLRHTEVLPAEEENDSLSVEGAQGTGAVESAAGVLIKL
FCVHTKALQDVQIRFQPLHSPDMSTSMPSHGSHEEFAFPDHMADLSTEGLGSEKGSVHGS
QPDLRRIADLPVPADFLSLSNDAKPKLMTPDAFMTPSTSLQQIAVSPGSSVSSLTAVTAM
SSTSVTDTSMPRPSEDLTVSPKMQLDTSLTLSSSSSSLQTSPRSHSVLIPGLPDKLTPKA
PVTSGNPSLALELQDVEPLVVPQASPTRERSPDVISSASTAMSQDIPEIASETLQRSFAA
APSGLPAEVLESSHHADSMASAASALHLLSPRNRHNSEHSHHSLDMPPVEVDRLNTPSLL
ETALTQENASSDSVVGQPWPAAPDITRETRNSMADSPRDEVEEKHKSSSYHRHSYHLLQH
DSQDASAEQSDHDDEVASLASTSGGFGAKASTQRLPVKDWKAKASPRASPKLKRKGKKDD
GDVNQSPRSSNNQVTPEFQDELMCILRSQQRELSELRQNQMELLQRLTDHLDAIQSSLMG
HVERVIDSQQEQEQRRLDRALTEGQQRNGQLQEHLSQQLSQSLSTAVCNRLERTIREEMK
KTVPQCISKSVDPIAGQLSNTIAAKLTAVEGTLKESITKLVKSKNLTDSVVRATADTLQG
PIQSAYREAFQSIVLPAFEKSCQSMFQQINDTFKQGTQEYIQQLETHLKNKKVREQEARD
PLLSQLRQLISSFQSSTEQLASTVAASVHAEVQHQLHIIVGNLQESILAQVQRVIKGEVS
LAMKEQQAAVTSSIVQAMRSAAGTPIPSAHLDFQSQQTHILQLLQQGHLNQAFQQALTAA
DLNLVLYVCETVDTQQVFGQHPCPLSQPVLLSLIQQLSSDLGTRTELKLNYLEEAVMHLD
HSDPITRDHMGSVMNQVRQKLFQFLQVEPHNTLSKPARRLMIMLQGLVTPGMT
NT seq
4124 nt
NT seq
+upstream
nt +downstream
nt
gttcagtgaatgagaaccagagaccatcaaattcctataacggagacctgaatggactgc
tggtgcctgatcccatcgtggctggagatggaccttctttggctaagccagtgcatcgca
gcatttctcttggagccctgcaggagaagcaagtcatctgcctttccggtgatgacagct
ccacgtgcgtagtgatatcagcaaaagatgtggagatagtggccagcagcgattccagca
tcaccagtaaggccagaggaagtaacaaggtgaaaatacaacctgttgctagatacgact
gggagcagaagtactattatggcaatctgatagctgtttcaaactcttacctggcttacg
ccattagagctgccagtaacggctccgctatggtgcgagtgttgagcgtcagcactgctg
agcggactttgctgaagggattcacaggcggtgtggcagacctggcttttgctcatctca
actccaaccagctggcgtgcctcgatgaggctggcaacctttttgtctggcgcctggcca
tggataaagaaaaaatccaagaggagatcttggttaacatcaagcgacctgacaataccc
cgctgaacacctctcgaagaatcatatggtgccctttcatcccagatgataatgaggaga
gtggtgaagagggaagtcagacgttggcgttgttgcatgaggacagggcagaggtgtggg
atttggacattatccgaacaaacaacagctcgtggccggtggaagtgcctagcatcaaag
aaggcttcatcgtagtgaaaggccacagcacgtgcctgagcgagggagcactttctccag
atggaactgtgttggccacagcaagccacgatggttttgtcaaattctggcagatctata
ttgaagggcaagacgagccaaggtgtcttcatgagtggaaaccccatgatggcaggcctc
tttcctgcctgctcttctgtgacaaccataaaaaacaagacccagaggttcccttctgga
gatttctcatcacaggagcagatcagaacagagaactgaagatgtggtgcactgtgtctt
ggacctgtctgcaaactgtccgcttttctcctgacatcttcagctccatgagtattcttc
ccagcctgaaagtttgcctggacctctctgctgaatatctgatactgagcgatgtgcaga
gaaaagtattatatgtgatggagctgatgcagaaccaagaggagggcaaagcttacttca
gctccatctcagagttcctccttacccacccagtcctaagctttggcatccaggcagtga
gccgctgtcggttaaggcacactgaagtgctcccagcagaagaggagaacgacagcttga
gtgtagaaggtgctcagggaactggagctgttgaatcagcagcaggcgtgctgataaaac
tcttctgtgtgcacaccaaggctctacaggatgtgcagattagattccagcctcttcata
gtcctgacatgagcacatccatgccttcccatggctctcatgaagaatttgcctttccgg
accacatggctgatctaagcacagaaggcctgggatccgaaaaaggatcggtgcatggct
cccaaccagacctgcggcgtattgctgacctgcctgtaccagcggacttcctttctctct
caaatgacgccaaacctaagctgatgactccagatgcgttcatgacaccaagtacatctc
ttcaacagatcgctgtgtctccaggcagcagcgtcagttccctgactgcagtcacagcca
tgagtagcacatctgtcacggacacctctatgcccaggccatcggaagacttgactgtga
gccccaagatgcagctggacaccagccttacgctgagtagcagcagcagcagtctccaga
ctagtcctaggagccattcagttcttatcccagggctccctgacaagctaacaccaaagg
cacctgtcacatcaggaaacccctctctagcactggaattgcaggatgtggagcccttgg
tggtgcctcaggcttctcccacccgcgagcgctcgccagacgtcatttcctctgcttcca
cagccatgtcccaagatatcccagagattgcttccgagaccttgcaacgcagctttgcag
cagctccgtctgggctccctgcagaggtgctggagtccagtcatcatgcagacagtatgg
catccgctgcctccgccttgcatttgctgtctccaaggaaccggcacaattcagagcaca
gccaccactctttggacatgcctccagtggaggtagacagactgaacactccatcattac
tggagactgctttaactcaggaaaatgcatcttctgacagtgttgtgggtcagccgtggc
cagcagctcctgacataaccagagaaactaggaacagcatggcagacagcccaagggatg
aggttgaagaaaagcacaagagctcttcctatcatcggcacagctaccacctgctgcagc
atgacagtcaggatgctagtgcggaacaaagtgaccatgatgatgaagttgcaagcttgg
cttctacgtcaggtggatttggtgccaaagcgtctacgcagaggctgcctgtgaaggact
ggaaagccaaggcatcccctcgggcttccccaaagctaaagcggaagggcaagaaagatg
acggggatgtgaaccagtcgccaagatcatctaacaaccaggtgacaccagagttccagg
atgagctgatgtgcatattgaggagccaacagcgggagctttccgagctgcgtcagaacc
agatggagctgctgcagagactcacggaccacctcgatgccattcagagctcccttatgg
gccacgtggagcgggtgattgactcccagcaggagcaggagcagagaagactagaccgag
cgctgacggaaggacagcagcgcaatgggcagctccaggagcatctgtctcagcagcttt
ctcagtccctttccactgctgtgtgtaaccgtctggagaggaccattcgcgaggaaatga
agaagaccgtaccccagtgcatttccaagagcgtggaccctattgctggccagctaagta
acactattgctgccaagctcactgctgttgagggaacactgaaagagagtatcaccaagc
tagtgaaatcaaagaaccttacagatagtgtcgtgagggcaacagccgataccctgcagg
ggccgatccagtcagcttacagggaagcgtttcagagcatcgtgttgccagccttcgaga
agagctgccagtccatgttccagcaaatcaatgacaccttcaagcagggcacgcaggaat
atatccagcagcttgagacgcacttgaagaacaagaaagtacgagaacaggaggctcggg
acccgctgctgagtcagcttcgacagctcatcagcagcttccagagcagcactgagcagc
tggcttccactgtcgcagccagcgtccatgctgaggtgcagcatcagctgcatattatcg
tgggcaacttgcaggagtccattttggcccaggtgcagagagtcattaaaggagaagtga
gcctggctatgaaggagcagcaagcagctgtcacttcgagcatcgtccaggcaatgcgct
cggcagctgggactcccatcccctctgctcacttggatttccagtctcagcaaactcaca
tccttcagctgctccagcagggacacctcaaccaagctttccagcaggctctaacagcag
ctgatctcaacctggtcctgtatgtctgtgagactgtggatactcagcaagtattcggac
agcatccgtgcccgctgtcccagcctgtgctgctctctctcattcagcagctctcctcgg
atttgggtactcgtacggaactgaagttgaattacttggaggaagcggtgatgcacctgg
accacagtgaccccatcacccgagaccacatggggtcagtcatgaaccaggtgcggcaga
aactcttccagttcctccaagtggaaccccacaacacgctgagcaagcctgcccgtcgcc
tcatgatcatgctccagggcctggtcacccccggcatgacctag
DBGET
integrated database retrieval system
