KEGG   Chlamydotis macqueenii (Macqueen's bustard): 104479447
Entry
104479447         CDS       T08437                                 
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
  KO
K20179  vacuolar protein sorting-associated protein 11
Organism
cmac  Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac04140  Autophagy - animal
cmac04148  Efferocytosis
cmac05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cmac00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    104479447 (VPS11)
   04148 Efferocytosis
    104479447 (VPS11)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    104479447 (VPS11)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cmac04131]
    104479447 (VPS11)
Membrane trafficking [BR:cmac04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    104479447 (VPS11)
   Hops complex
    104479447 (VPS11)
SSDB
Motif
Pfam: PEP5_VPS11_N TPR_PEP5_VPS11 VPS11_N VPS11_C Clathrin zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-rbx1 zf-C3H2C3 TPR_GEMI5 zf-RING_5 zf-RING_UBOX Paralemmin ISG65-75 zf-RING_11 zf-ANAPC11 Beta-prop_EML_2 GPS2_interact zf-C3HC4_3 DLP_helical zf_RING_Vps8_fungal zf-RING-like
Other DBs
NCBI-GeneID: 104479447
NCBI-ProteinID: XP_010118404
LinkDB
Position
Unknown
AA seq 877 aa
MEGQIWFLPRSLQLSSFQAYKLRVTHLYQLKQHSILVSVGEDEEGINPLVKVWNLEKRDG
GNPLCTRIFPAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQLLH
EGSYPVTGLAFRQSGKTMHLFVVTTENIQSYMLSVKDYPHLELDTHGCGLRCSSLSDPSQ
DLQFIVAGNECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKDRKTSPKSEFAGNEA
QNSDKQVLNIYDLCNKFIAYSSIFDDIVDVLAEWGSLYVLTRDGKIHVLQEKDTQTKLEM
LFRKNLFEMAINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYV
IRKFLDAQRIHNLTAYLQTLHLQSLANADHTTLLLNCYTKLKDSSKLEEFIKTSESEVRF
DVETAIKVLRQAGYYSHAVYLAEKHAHHEWYLKIQLEDIKNYQEALRYIGKLPFDQAESN
MKRYGKILMHHVPNETTELLKILCTDYRPSGDNEGPGMLEGKKANSEEFIPVFANNSREL
KAFLEHMTEVQADSPQGVYDTLLELRLQNWAHEQDDQIKEKLHNEALTLLKSGRFRTVFD
KALVLCQMHNFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCEFYGDQEACLWEQAL
GYFARKEEDCKEYIAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQKQSR
QIEQDEQRIKKYREETTRIRQEIEELKASPKIFQKTKCSICTSALELPSVHFLCGHSFHQ
HCFESYSESDAECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDGFSVVADYFGR
GVFNKLTLITDLPSGKLATTIEAGLHREPLAHSKRST
NT seq 2634 nt   +upstreamnt  +downstreamnt
atggaaggtcagatttggtttttgcctcggtcccttcaactcagtagtttccaagcttac
aagctaagggtaacgcatctgtaccagctgaagcagcacagtatcttggtttctgttggt
gaggatgaagagggtattaaccccttggttaaagtctggaacctggagaaacgagatggt
ggcaatcctctttgcacacgaatttttccagcaatacccggtaacaagcccacagttgta
tcctgcctaactgtccacgagaatcttaatttcatggctattggttttgcagacggaagc
gttgtacttacaaaaggagatatcactcgagaccggcatagcaagacccagctcctccat
gaaggcagttacccggttactggccttgctttccgacagtctggcaaaacaatgcatctg
tttgtggtgaccacagagaacatccagtcttatatgctttcagtgaaagactatcctcac
ctggagctggacactcacggctgcggattgcgctgttcatctctcagcgacccctcccag
gatctccagttcattgtggcaggaaatgaatgtgtgtacctttatcaaccagacgaacgt
ggcccatgctttgcctttgagggacaaaagctgattgtccactggtatcgggggtacctc
atcattgtctccaaggaccgaaagacttctccaaagtcagagtttgctgggaacgaggca
cagaattcagacaaacaagtcctgaatatctatgacttgtgcaacaaattcattgcatac
agctcaatctttgatgatatagtggacgtcttagcagagtggggttctctgtacgtactg
accagagatgggaagattcatgtgctgcaggagaaggatacgcaaaccaaactcgagatg
ctgttcagaaagaacttatttgaaatggccattaacctggccaagagccaccacttggac
agcgatggtttgtcagagattttccggcagtacggcgatcatttgtataacaaggggaac
cacgatggagccatccagcaatatatccgaactatagggaagctggaaccgtcttatgtt
attcggaaattcctggacgctcagcgtatccacaacctcactgcttacctgcagacgctc
catctgcagtccctggccaatgcagaccatactacgcttctgctgaattgctataccaaa
ctgaaagacagctccaagctggaggagttcattaagacgagtgagagcgaggtccgcttc
gatgtggaaacggcaatcaaggtgcttcgtcaagcaggttactactcccatgctgtgtat
ctggcagagaagcacgcgcatcatgagtggtacctcaaaatccagctagaggacatcaag
aactaccaagaggctctgcgctacattggaaagctgccttttgatcaggcagagagtaac
atgaagcggtatggtaaaatcctgatgcaccatgtcccgaacgagaccacagaattgctg
aaaatcctttgcaccgattaccggccatcgggagacaatgaaggccctgggatgctggag
ggaaaaaaggctaattcagaggagttcattccagtctttgcaaacaactcccgagaactg
aaagcttttctggagcacatgactgaggtgcaggctgactctccgcagggcgtctatgac
actttactggaacttcggctccagaactgggcacacgaacaggatgaccagatcaaggag
aagctgcacaatgaagccctcaccctcctgaagagtggaaggttcagaacggtctttgat
aaggctttggtcttgtgtcagatgcacaatttcaaggatggtgtcctctacctctatgag
caaggcaaacttttccaacagatcatgcactaccacatgcagaatgagcagtacaagaag
gtgatcgaggtgtgcgagttttatggagaccaagaggcttgtctctgggaacaggctctc
ggctactttgcacggaaagaggaggactgcaaagagtacatagctgcggtgctgaaacac
atcgagaacaagaaccttatgcctccgctgcttgttgtgcagacgctggctcacaattcc
acagccacactctctgtgattaaggattatcttgtcaacaagctgcagaagcagagccgc
cagatagagcaggatgagcagagaattaaaaaataccgagaagaaactacaaggatccgc
caggagatcgaggagctaaaagcaagtcccaagatctttcagaagaccaagtgtagcatt
tgcaccagtgccctggagctgccttcggtccacttcctatgcggtcattccttccaccag
cattgcttcgaaagctactctgagagcgatgcagaatgtccgacttgcatgccagaaaat
cgcaaagtcatggacatgatccgagcgcaggagcagaagagagatctgcacgaccagttt
cagcatcagctcaagtgttccaacgacggcttctctgtcgtggccgactacttcgggcga
ggcgtcttcaataagctcaccctcatcacggacttgccctcgggaaagttggcgaccacc
atcgaggccggcctgcaccgggaaccgctcgcccacagcaagcgcagcacctga

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