Chlamydotis macqueenii (Macqueen's bustard): 104480042
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Entry
104480042 CDS
T08437
Symbol
COL17A1
Name
(RefSeq) collagen alpha-1(XVII) chain
KO
K07603
collagen type XVII alpha
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104480042 (COL17A1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
DUF5006
Motif
Other DBs
NCBI-GeneID:
104480042
NCBI-ProteinID:
XP_010119156
LinkDB
All DBs
Position
Unknown
AA seq
1500 aa
AA seq
DB search
MDSVTKKTRQEGSEVTERQGGSSSGLKTSSHTGGSGVEKRSYTHGSSYVTSSGSGRLNSS
SSSSGYRQTQSPSSTLTKSPGSTFERKTYVSRHATYEGSSSANSSPEFPRKEIASASTRG
RSQSRESEIRVRLQSASPSGRWTELDDVKRLLKGSRSASCSPTRSPSSTLPIPKKAVVET
KMVTESSQSVSGTYDTTILNSALPSYMWSSTLPAGSSLGGYHNSSSLINAMSHSTGSVFG
VPNNLAPSNHTLNAGLSTSSTVFGVQNNLSPGSSTLTQNATAASAAYGMKNTSQSNTMAS
TGVSASTGGTILSSQGDDILHKDCKFLLVEKENVPAKKEMELLIMTKDSGKVFSASGTGL
NGGSFAEDTLKKEKQVFSSSYATDTALKSDANGGLKSVPTRDKATYAEIRNGDAGGAIGS
APSWCPCSSCCSWWKWLLGLLLAWLLLLGLLFGLIALAEEVRKLKSRVENLEKINGGLLT
INHGNSKIEKDVSRVDFLHGISPSSTFPYENEESVWLMVKSRLNKEIERGYFRGERGEPG
EKGDMGMQGPRGERGLPGVPGIPGPIGHQGPEGPKGQKGSMGEPGVEGPMGQRGREGLPG
PRGEPGPPGFGEKGDRGGVGEPGPPGPPGPPGSAGLKGLMGSPGPQGPPGPPGLQGFRGE
AGLPGAKGEKGATGAPGPKGDQGEKGSRGLTGEQGSRGMPGPPGEPGPKGPVGQAGRDGQ
PGEKGEPGLMGMPGARGPPGPSGDAGQPGLTGPQGPPGLPGNPGRPGAKGEPGAPGKVIS
AEGSSTIALPGPPGPPGPAGPPGPPGVPGPVGPAGLPGQQGPRGEKGSPGEAVIETIKTE
VSSLTSQMLSDLQGRAGPPGPPGPPGESVQGPPGPRGPPGLPGPPGPPGRPGSSMSTSET
FFTGPPGPPGPPGPKGDQGERGPRGFTGEPGEPGLPAFSSHGDRVTIQGPPGLPGPPGPP
GPKGDAGVPGAPGIPGASRGGSRQIQGPPGPPGPPGPPGPGGSSSQEIQQYVTDYLKSDN
VRHYLTGAQGPPGPPGPPGVITTVDGTSLDYAELATRVMSYMTGSSDRYQSFSSSVSTTS
VLYQELLDMLQREEIRQYLIGPRGPPGPPGPGGDGMSLSLDYDELTRRFISYLTSSGMSI
GLPGPPGPPGTPGISYSDLTAYLRNSEFSGLVGPPGPAGPPGPPGIPGSPGTSLEDVSAY
LQSVGYSSLSGVQGPPGPPGPPGPPGFSGTGLLSYADITNSDEFRSELIQYLKSDEVRSY
ISGPPGPPGPRGPPGPKGDSGLVAGSMSSSFQGLRASERLHGESLGAEGSLGGSLGTGSS
YSSSVSSRSSYSASMGSDGSYGASMGSDGSFDGLLTEEESHRSAGSSRSYSNSFAGSLDY
NELALRVSESLQSQGILQDLMSYTAQGPPGPPGPPGPPGISRVFAAYGNVTEDLMDFFRT
YGTIQGPPGEKGERGYPGPKGDPGPMGPPGRHGQRGPKGEKGEKGEQMYVGRRKRRNVGV
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atggattctgtaacaaagaaaacgaggcaagagggatcagaagttactgaaagacaagga
gggagcagcagtggactcaaaacgtcatcccacactggagggagtggagtggaaaagagg
tcttacacccatggcagcagctatgtgacttcaagtggaagtggtagattgaattcatca
tcatcatcctctggctacagacaaacccagtctcccagctctactctcaccaaatcacct
ggctcaacatttgaaagaaaaacctatgtcagccgccatgcaacctatgaagggagctcc
agtgccaactcttctcctgagtttcccagaaaagagattgcatctgcctccacgagaggg
agaagccaaagtcgagaaagtgaaatacgagtccgactgcagagcgcatctccctctggc
agatggacagagttggatgatgtgaaacgtttgctgaaaggaagtcggtcagccagctgc
agccctactcgatcaccgtcaagtacactcccaataccgaaaaaggctgtggtggagaca
aagatggttactgaaagctctcagtcagtgtcggggacatatgatacaaccatactgaat
agtgccctcccgtcatacatgtggtcctccactctgcctgctgggtcttcccttggtgga
taccataacagctcttccttgatcaatgctatgtctcactctacaggatcagtttttggt
gtcccaaataacctggctcccagcaatcatactctgaacgcaggtctgagcacttcctct
acagtgtttggagttcaaaacaacctgtctccaggctcttcaaccctgacccagaatgct
actgcagcctccgcagcatatggcatgaagaacacttctcagagcaacactatggcaagt
actggtgtgtctgcctcaacagggggaacaattttgagctcccagggagatgacattctg
cataaagactgcaagttcctgctggtagagaaggagaatgtcccagcaaagaaggagatg
gagctcttgatcatgacaaaggacagtggcaaagtctttagtgcctctggcactgggctt
aatggaggatcctttgcagaagacactttgaagaaagagaagcaggtgttttcctcctct
tatgctacagatactgccctaaaatcagatgcaaatggaggactgaaatctgtgccaaca
agggacaaagcaacttacgcagaaatacgaaatggtgatgcagggggtgcaattggatca
gcaccatcctggtgtccctgtagttcgtgctgtagctggtggaaatggctcctgggtttg
cttctggcctggttgcttctccttggattgctttttggactcattgctctcgcggaagaa
gtgagaaagctgaaatctcgtgtggaaaacctggaaaaaatcaatggcggcctcctgaca
attaaccatgggaattcaaaaatagaaaaggatgtttcaagagtagactttcttcatggt
atttcaccctcctcaactttcccttatgaaaatgaagagtcagtctggttgatggtgaag
agcagactgaacaaggaaatagaacgaggctacttccgaggggagagaggagaacctggt
gagaaaggtgacatgggaatgcaaggtcccagaggggagcgaggacttcctggtgtccca
ggcattcctggtcccattgggcaccaaggaccagaaggaccgaaaggacagaaaggcagc
atgggtgagcctggtgtggaaggtcctatgggacaaagaggtagagaaggactgccaggg
cctcgaggggagcctggaccacctggatttggagaaaaaggagacagaggtggtgttggt
gagccaggtcctccagggccacctggtcccccagggtctgctggccttaaaggtctgatg
ggctctccaggcccacagggtcctccaggtcctcctggcctacaaggatttagaggagaa
gcaggtctcccaggtgctaaaggtgagaaaggagccactggagcccctggacccaaaggt
gatcagggtgagaagggttctcgtggactgacaggtgaacaaggctcaagaggaatgcct
ggtcctccaggagagccagggcctaaaggacctgtaggacaagctggccgtgatggacag
ccaggtgaaaaaggtgaaccaggtcttatgggaatgccaggagcccgaggcccgccagga
ccctctggagatgcaggacagccaggtctcacaggacctcaaggacctccaggacttcca
ggcaacccaggccgaccaggggctaaaggagaacctggagctccaggaaaagtcataagt
gctgagggttcatcaactattgctctgccaggcccaccaggtcccccaggcccagctggc
ccccctggccccccaggtgttccaggtcctgttggaccagctggtctccctggacagcaa
ggtccacggggtgagaagggatccccaggtgaagctgtaatagaaactatcaaaacagaa
gtctcatcgttaacatctcaaatgctgtcagatttacaagggcgagcaggaccaccaggt
ccccctggaccaccaggtgaatctgtgcagggaccccctggtcctcgtggccctccagga
ttgccaggacctccaggcccaccaggcagaccaggatcttcaatgtccacctcagaaacg
ttcttcacaggcccaccaggtccaccaggcccaccaggcccgaagggagaccaaggtgaa
agaggtccacgaggattcacaggagaacctggtgaacctggccttccagcattctcctcc
catggtgacagagtcaccatacagggacctccaggacttccaggcccaccaggcccacct
ggacccaaaggtgatgcaggtgtcccaggcgctcctggcattccaggggcatctcgaggt
ggatccagacaaattcagggacccccaggacctcctgggccacccggtcctcctggccca
ggtggaagttcatctcaagagattcagcagtatgtaactgactacctgaaaagtgacaac
gtaaggcattatttgactggtgcccaaggcccaccaggccctccaggcccacctggagtt
atcaccactgtggatgggacgagcttggattatgcagagctggctacccgtgttatgagc
tatatgacaggctcttcagatcgctatcagtcattttccagttccgtatcaactacatcc
gttttgtaccaggaacttctggacatgctgcagagagaagaaattcgtcagtatctaatt
ggacctcggggcccaccaggacctcctggaccagggggagatggcatgtctctgtcactg
gattatgatgagctgaccagacggtttatcagctacttgacaagttctggaatgagcatt
gggctccctggaccacctgggcctccaggaacacctggtatatcttacagcgacctgaca
gcatacctgcgaaactctgaattcagtggtcttgttgggccccctggtcctgcaggaccc
ccaggacctccaggaatccctggatcacctggcacttctctggaggacgtctctgcttac
ctacaaagtgtgggatactcctccctctctggagtccagggtccacctggccctcctggc
cctccaggaccaccaggcttctcaggaaccggcctcctgtcctatgctgacatcaccaac
agtgacgagttcaggagcgagctgatccagtacctgaagagtgatgaagttcgaagttac
atctcagggccacctgggccccctgggccacgaggaccaccaggacccaaaggagatagt
ggcttggtggctgggtctatgtcttcatcattccaagggttacgggcttccgagcggttg
catggagaatctcttggtgctgagggatcccttgggggatcactgggcacaggcagctca
tatagcagctctgtgagcagcaggtcatcttacagtgcctcgatgggcagcgatggctct
tatggtgcctccatgggcagtgatgggtctttcgatgggttgctgacagaggaggaatca
cacagatcagcaggttcaagcagatcctacagcaactccttcgctggatccctggattac
aacgagctggcactccgtgtgtcagagagcctccagagccaaggtattctccaggacctg
atgtcttacactgcacagggacccccgggtcccccaggccctcctggtccccctggcatc
agcagggtctttgcagcctatggcaatgtcaccgaggacctcatggacttctttagaacg
tatggtaccatccaggggccacctggtgaaaagggggagagaggttatcctggacccaag
ggtgaccctgggccgatgggcccgccaggacgccacgggcagaggggaccaaaaggagag
aaaggagagaaaggtgaacaaatgtatgttggcagaagaaaaagaagaaatgttggggtt
taa
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