Chlamydotis macqueenii (Macqueen's bustard): 104480188
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Entry
104480188 CDS
T08437
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac04140
Autophagy - animal
cmac04148
Efferocytosis
cmac05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104480188 (VPS18)
04148 Efferocytosis
104480188 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104480188 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmac04131
]
104480188 (VPS18)
Membrane trafficking [BR:
cmac04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104480188 (VPS18)
Hops complex
104480188 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_Vps41
zf-RING_16
zf-RING_5
zf-RING_11
Lact-deh-memb
zf-RING_UBOX
zf-ANAPC11
zf-RING_2
zf_RING_Vps8
Nup54_57_C
STX17_N
DUF5600
zf-rbx1
DUF1664
KNOX2
Motif
Other DBs
NCBI-GeneID:
104480188
NCBI-ProteinID:
XP_010119351
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
YVNARLEKETPIFNKQRIDFAPPEKINSLVVSSNQLCMSLGKDTLLRIDLGKPDEPNQVE
LGRKDEAKVYKMFLDHTGSHLLIALNTSECLYLNRSVQKVRALSRWKGHLIESVGWNKFL
GSETNTGPILVGTAQGQIYEAEISVSEGSLFSTNPDQYFRQVYTLEEESGPAPVCCLEIE
RGIEGKFFIIATTRKRLFQFVGKVPEGSEQQGFSSIFAMHADHLPSFREFPASFGFSEIA
FYTPKLRSNPRSFAWMMGNGVLYGTLDYSRPDSILSDERVWVYPSDIDITVNKPISIVLT
QFHFLLLLPDRVKAVCTLNGQVVFQDLFLEKFGFLTRMIKDPTVQQIWIHTEKVVFRYHV
QRESRDVWKMYMNMNKFDLAKEYCKDRPECLDIVLAKEAEHCFQNKRYLDSAKCYALTQN
YFEEIALKFIEAKQEEALMEFLIKKLSNLKPSEKTQTTLLTTWLTELYLNWLGILEGDPS
QRNLYLDTREKFRTFLSSPRNKDCLFNNRASIYELLASHGDTEHMVYFAVIMQDYERVVA
HHCQHDEYDEALNVLSRHRDEKLFYKFSPVLIQHIPKKVVDAWISMGSRLDARNLIPALV
NYSQSASTQQINEAIRYMEFCVYQLEETQQAIHNYLLSLYALCRPDSLLSYLEQAGTNPN
RIHYDLKYALRLCAEHGHHHACVHIYKVMELYEEAVDLALQVDVDLAKSCADLPEDDEEL
RKKLWLKIARHVVQEEKDVKKAMACLSSCALLKIEDVLPFFPDFVTIDHFKEAICNSLED
YNKHIEELKREMEEATQSAKRIREDIQEMRNKYGSVEPQEKCAACDFPLLNRPFYLFLCG
HMFHYDCLLQAVFPNLPAYKQAKLEDLQKKLAATSQPSKSHHRPKDADTSSLGKGQQSRE
QIKADIDDIVAAECVYCGELMIRSIDKPFIDPQKYEEEMQSWL
NT seq
2834 nt
NT seq
+upstream
nt +downstream
nt
gatatgtgaatgcacgattggagaaggaaacaccgatatttaacaagcaaagaattgatt
ttgctccaccagagaaaattaacagcctagtggtctcctctaaccagctctgtatgagcc
ttggcaaagacacccttctcaggattgatcttgggaagccagatgaacctaatcaggtag
agctaggacgcaaagatgaagccaaagtctacaagatgtttttggaccacacaggctctc
atctcctgattgctctgaacaccagtgaatgcctttacctgaacagaagtgttcagaaag
tgcgagcgctctcccgctggaaaggccacttgattgaaagtgtgggctggaacaagtttc
ttggttcagagaccaacactgggcctatcctggtggggacagcccaggggcagatctatg
aggctgaaatctctgtcagcgagggaagcctcttcagcacaaatcctgaccagtacttca
gacaggtctacactctggaggaggaatcaggacctgccccagtctgctgcttggagattg
aacgagggatagaagggaagttttttattatagccaccactcgaaagagactcttccagt
ttgttggtaaagtgcctgaagggtcagagcaacaaggcttcagttccatatttgctatgc
atgctgaccatttgcccagcttccgggagtttccggccagctttggtttcagtgagatag
ccttttacaccccaaaactgcgctccaacccacgctcctttgcctggatgatgggaaatg
gtgttttatatggtacattggattatagccgtcctgattcaattctgagtgatgaacggg
tttgggtttatccttctgatattgacataactgtgaacaagccaatatccattgtactta
cccagttccacttcctgttgctgctgcctgatcgagtgaaggctgtatgcactctgaatg
ggcaggttgtttttcaagatctgttcctggagaagtttggctttttgacacgcatgatca
aagatcctacagtccagcagatatggatccacaccgagaaagtagtgttccgctaccatg
tccagagagaatctagagatgtgtggaagatgtatatgaatatgaacaaatttgatttag
ccaaagagtactgtaaagaccgtccagagtgtctagatattgtgctggcaaaagaggcag
agcactgcttccaaaacaagaggtatctagacagtgccaaatgttatgcgctgacccaga
actactttgaggaaattgctctgaagttcattgaagccaagcaagaagaagccctgatgg
agtttctgattaagaagctaagtaacctaaagccttctgagaagacacagaccaccctgc
tgaccacatggttaacggagctgtacctgaactggctaggtatattggaaggagatccct
cacagcgaaatctctatttagatacacgagagaagtttcgcacgttcctgagcagcccta
gaaacaaagactgtctgtttaataaccgagcatctatttatgagctgttggcaagccatg
gggacacagagcacatggtctactttgcagtcatcatgcaggattatgagcgtgtagtag
ctcaccactgccagcatgatgaatacgatgaagctctaaatgtgctgtcaaggcacagag
atgagaagctgttctacaagttctctccggtcctcattcagcatattcctaagaaggtag
ttgatgcttggatttctatgggttccagactggatgccaggaacctcattccagcccttg
ttaactacagccagagtgccagcacccagcagatcaatgaagccattagatatatggagt
tctgtgtctatcagttggaggaaacccagcaagccattcacaactacctgttgtctcttt
acgctttgtgtcggccggactcgctgctgtcctacctggagcaagctggaaccaacccaa
acaggatccattatgacctgaagtatgcactgcgcctgtgtgcagagcatgggcaccacc
atgcatgtgtccatatttacaaagtgatggaattgtacgaggaggccgtggatctcgcct
tacaggtggatgttgatcttgccaagtcctgtgcagatctacctgaagatgatgaggaac
tccggaagaagctctggttgaagattgctcgccatgttgttcaggaggagaaggatgtca
agaaggcaatggcctgcctctccagctgtgccctgctgaagattgaagacgtcctgccat
tctttccagactttgtcactattgaccatttcaaggaggctatctgtaactccttggagg
actacaacaagcacatagaggagctgaaaagggagatggaggaagccacacagagtgcca
agagaatccgagaggacatccaggaaatgagaaataaatatggttctgtggaacctcagg
aaaaatgtgctgcttgtgactttccactcctaaaccgccctttttaccttttcctgtgtg
gtcacatgtttcactatgactgtctcctccaagcagttttcccaaaccttcctgcctata
agcaggcaaaacttgaagatcttcagaagaagctggcagctaccagtcagccttccaaga
gccaccatcgtcccaaggatgcagataccagtagcttgggaaagggacagcagagccggg
aacagatcaaagctgacattgatgacattgtggcagctgaatgtgtgtactgtggtgagc
tcatgatccggtccattgacaagccttttattgatccccaaaagtatgaagaggagatgc
aaagctggctgtag
DBGET
integrated database retrieval system
