Chlamydotis macqueenii (Macqueen's bustard): 104480827
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Entry
104480827 CDS
T08437
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104480827 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmac03400
]
104480827 (MSH2)
DNA repair and recombination proteins [BR:
cmac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104480827 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
104480827
NCBI-ProteinID:
XP_010120153
LinkDB
All DBs
Position
Unknown
AA seq
883 aa
AA seq
DB search
MELADVGSKSIEIKYLVRRGKPLKLESVVLSKMNFESFVRDLLLVRHYRVEVYKNKAGSK
SIKENDWYLAYKGSPGNLAQFEEVLFANNDMSTAIGVVGVKLSTADGQRLVGVGYVDTTL
RKLSVCEFPDNDQFSNLEALLVQLGPKECVLPGGETAGEMGKLRQVIQRGGILITDRKKA
DFTTKDIVQDLNRLLKSKKEEQMNSAALPEMEKQVAVSSLSAIIKFLELLSDEANFGQFE
LTTFDLSQYMVLDNAAVQALNLFQSSVENANTAQSLAGLLNKCRTPQGQRLVNQWIKQPL
MDKNRIEERLNLVEAFVVDPELRQCLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRMYQA
INQLPNVVRALEKHEGAHQMLLLAVFITPLNDIYSDFSKFLEMIETTLDMDKVENHEFLV
KASFDPNLTELREKMNELEEKMQSFLKTAAKELGLEAGKSIKLETNSQFGHHFRITCKEE
KVLRNNSKYGIVDTQKNGVKFTNSKLSSVNDEYIKNREEYEEAQDAIVKEIINIASGYAE
PIQTMNDVIAQLDAIVSFAHVSNGAPVPYVRPVILEKGQGRIVLKAARHPCIEVQDEVAF
IPNDVTFEKGKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEITIVDCILA
RVGAGDSQLKGVSTFMAEMLETASILRTASENSLIIIDELGRGTSTYDGFGLAWAISEYI
ASKICAFCMFATHFHELTALADQVPTVNNLHVTALTSDDTLTMLYRVKEGVCDQSFGIHV
AELAAFPKHVIESAREKALELEEFQNIGKSKESEGEPPTKKFYREREEGEKIIEDFLCQV
KALPLTDMSEDDIKIKLKQLRNDVLAKNNSFVNEIISRTKVTS
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggagcttgcagatgttggatctaagagcattgagataaaatatcttgtcagaagaggc
aaacctttgaaacttgaaagtgttgtgctcagtaaaatgaactttgaatcttttgtgaga
gatctgcttcttgttcgtcattatagagttgaagtttacaagaacaaagcagggagtaaa
tctatcaaagaaaatgactggtatttagcatacaagggttctccaggaaatcttgcccag
tttgaggaagttctctttgccaacaatgatatgtcaacggccattggggttgtgggggtt
aagctgtctactgctgatggacagagactagtaggagtggggtatgtcgacactaccctg
agaaaattgagtgtctgtgagtttccagataatgatcagttctcaaaccttgaagctctg
ctggttcaactaggaccaaaggagtgtgtcctaccaggaggagagactgcaggagaaatg
ggaaagctacgacaagtcattcagaggggaggaatcctgattacagacagaaagaaggcg
gatttcacaacaaaagatattgttcaggatctcaatcgcttgttaaaatcaaaaaaagaa
gaacaaatgaatagcgcagcattgccagagatggaaaagcaggttgctgtttcgtctttg
tcagccattatcaagtttttagagttgctgtcagatgaggctaactttggacaatttgag
ctgactacttttgatcttagccaatatatggttctggataatgcagctgttcaagccctc
aacctttttcagagctctgtggaaaatgctaatactgcgcagtctctagctggtttacta
aataaatgcagaacccctcaaggacaaagactagttaatcagtggatcaaacaaccactt
atggacaagaatagaattgaagaaaggttgaatttggttgaagcttttgtggtggatcca
gaactacgtcagtgccttcaagaagatctcttacgtcgcttcccagatcttaaccggctg
gcaaagaaattccagagacaggcagcaaacttacaggactgttaccgaatgtatcaggct
attaatcaactacctaatgttgtacgagcactagaaaaacatgaaggagctcaccagatg
ttgttgttggcagtgtttataacacctcttaatgatatctactctgacttctcaaagttt
ctggagatgatagaaacaacattggacatggataaggtagagaatcatgaatttcttgtc
aaggcttcttttgatccaaatttgacagaattaagagagaagatgaatgaactggaagaa
aaaatgcaatcttttttaaagactgcagccaaagaactaggtttggaagctggcaaaagt
atcaaactggagaccaattcacagtttggacatcactttcgaataacttgcaaggaggaa
aaagttctccgtaacaattcaaaatatggaatagttgatacacagaagaatggtgtgaaa
tttactaacagcaaactgagctctgtcaatgatgaatatataaagaacagagaagagtat
gaagaggctcaggatgcaattgttaaggaaatcattaacattgcttcaggttatgcagaa
ccaatacagacgatgaatgatgtgatagctcagttagatgcaattgtaagttttgctcat
gtgtcaaacggagcaccagtgccgtatgtccgtcctgtcattctggaaaagggacaagga
aggattgtgctgaaagctgccagacatccttgcattgaagtgcaagatgaggtggccttc
atccccaatgatgttacgtttgagaagggcaagcagatgttccacattattactggccct
aacatgggaggaaaatcaacatacatccgacagacaggggtgattgttcttatggcccaa
attgggtgttttgtaccttgtgactctgcagaaataaccattgtggattgtatcctggct
cgagtgggagctggagacagtcagctgaaaggagtgtctactttcatggctgaaatgtta
gaaacggcttcaatccttaggacagcatctgaaaactccttgataatcattgatgaactg
ggaagaggaacttctacttatgatggctttggcttagcatgggctatttcagaatacatt
gctagcaaaatctgtgctttctgtatgtttgctacacactttcatgaactgacagctctt
gctgaccaagtgccaacagtaaataacctacatgttactgctttgaccagtgatgacacg
ctgacgatgctttatcgtgttaaggaaggtgtttgtgatcagagttttggaatccatgta
gcagagttggcggctttcccaaaacatgtgatagaaagtgcaagagagaaagcactggag
ctggaggagtttcaaaacattggcaagtccaaggaatctgaaggagaaccaccaaccaag
aaattctacagagaaagagaggaaggtgaaaagataattgaggattttctttgtcaagtg
aaagcattgcccctgacagatatgtcagaagatgacatcaaaatcaagctgaaacagctg
agaaatgatgtgttggcaaagaacaacagttttgtgaatgaaattatttcccgaacgaaa
gttacatcatga
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