Chlamydotis macqueenii (Macqueen's bustard): 104481136
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Entry
104481136 CDS
T08437
Symbol
YTHDC2
Name
(RefSeq) probable ATP-dependent RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmac03041
]
104481136 (YTHDC2)
Enzymes [BR:
cmac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104481136 (YTHDC2)
Spliceosome [BR:
cmac03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104481136 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
Ank_2
AAA_19
nSTAND3
Ank
ATPase
AAA_22
Ank_4
PhoH
AAA_23
AAA_7
AAA_16
SRP54
AAA_29
AAA_30
ResIII
Motif
Other DBs
NCBI-GeneID:
104481136
NCBI-ProteinID:
XP_010120538
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MTCCLAASTKHAVRSLIQRFPVTNKERTELLPKTERGNACAVESENREVNKTSGRLNNGI
PQVPVKRGESEFDSFRQSLPVFEKQEEIVRIIKDNKVVLIVGETGSGKTTQIPQFLLDDC
YKNGTPCRIFCTQPRRLAAIAVAERVAAERREKIGQTIGYQIRLESRVSPKTLLTFCTNG
ILLRTLMAGDSTLSTVTHVIVDEVHERDRFSDFLLIKLRDVLQKQTNLKLIISSAALDAN
LFIRYFGSCPVVHIQGKPFEVKEMFLEDILRSTGYTNKEMIKYQKEKQREEKQQSTLTEW
CSAQEGNSKLESQRQRCAPSATEVYNLLEDGGDTVFNQLTEKDANCLEPWLVKEMDSCLS
DIWLHKDVDSFAQVFHLILTENVSVDYRHSETSATALMIASGRGFLSQVEQLISMGASIH
CKSSNGWMALDWAKRFGQTEVVDLLESYSASVESGNLDESSLVQTSGSDLSAEDRELLKA
YHHSFDDEKVDLDLIMHLLYNICHSYDAGAILIFLPGYDEIVSLRDRILFDDKRFADNAH
RYQVFMLHSNMQTLDQKKVLKSPPSGIRKIILSTNIAETSITVNDVVFVIDSGKMKEKSF
DALTCVTMLKMVWISKASAIQRKGRAGRCQPGVCFRLFSRLRFQNMLEFQTPELLRTPLQ
ELCLHTKLLAPINCPIVDFLMKAPDPPPALIVRNAVQMLKTIDAMDPWEDLTELGYHLTE
LPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTLASQKRAAMLCRKRFTAGTF
SDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIVGMRTQLLGQLRASGFVRARG
GADIRDVNTNSENWAVVKAALVAGMYPNLVHVDRENLVLTGPKEKKVRFHPTSVLSQPQN
KKIPPANGQAAAIQALPTDWLIYDEMTRAHRIANIRCCSVVTPVTVSLFCGPARLPSNAL
QEPASFRGDGVSNDNSDSEMEDKTTANLALLKLDEWLQLKLDPEVSNISLQCLFLLGVLV
HFHELADSDETARQKIMAAGDSKLQMIVAA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgacttgttgcttggctgccagtacgaaacatgctgttcggagtttaattcagagattt
cctgtcacaaataaagaacgaacagaacttctgccaaagactgaacgaggaaatgcatgt
gctgttgaatctgaaaacagagaagtgaacaagacaagtggacgacttaacaatggtatc
ccccaggttccagtgaaaagaggggaatcagagtttgattcctttaggcagtcactacca
gtttttgaaaaacaggaagaaattgtcagaataataaaggacaataaagttgttttgatt
gtaggagagactggatcaggaaaaactactcaaatccctcagttccttcttgatgactgt
tataaaaatggaactccttgtcgtatattttgtactcagccaagacgtttggcggctatt
gctgtggctgaaagagtggcagcagaaagaagagaaaagattggccagacaatcggttat
cagatccgattagaaagcagggtttccccaaagacactgttaacgttttgcactaatggc
atactacttcgcacgctaatggcaggagacagcactctatcaactgtaacacatgttatt
gtggatgaagtacatgagagggataggttcagtgacttcttattaataaaactgagagat
gtgttgcaaaaacagactaacttaaaactaattatttctagtgctgctctagatgcaaat
ctctttattaggtattttggaagttgcccagtagtacatatacaaggaaaaccttttgaa
gttaaagagatgtttttggaggacattttacgaagcactggatatacaaacaaagagatg
ataaagtaccagaaagagaagcagcgagaagaaaaacagcagagcactcttactgagtgg
tgttctgctcaagagggtaatagcaaactggaatctcagaggcaaagatgtgccccaagt
gcaactgaagtgtataatctgttggaggatggtggtgacacagtatttaatcaactgact
gaaaaagatgcaaattgccttgaaccgtggctagtaaaagaaatggattcctgtctttct
gacatctggttgcataaagatgttgattcctttgctcaggtgttccatctcattttaact
gaaaatgtcagtgttgattataggcacagtgaaaccagcgccactgcactaatgattgct
tcagggagaggctttctgagtcaagtagaacaactgatcagtatgggagcaagtattcac
tgcaaatcatccaatggctggatggctttggattgggctaagcgctttggacagacggag
gttgttgatctgttggaatcctacagtgcttcagtggaatctggaaatctggatgaaagt
tccctagtccagacaagtggtagtgaccttagtgcagaggacagagaactgctgaaagct
tatcatcacagttttgatgatgaaaaggtggatctggacctgattatgcacttactttat
aacatctgtcatagttatgatgctggagcaattttaatatttcttcctggatatgatgag
atagttagcctgagggaccgtattctttttgatgacaagagatttgctgataatgctcac
agataccaagttttcatgcttcattcaaatatgcagactttggatcagaagaaggtgctt
aaaagtccaccttctggcatccgcaaaataattctttctactaatattgcagaaaccagc
ataacagtcaatgatgttgtatttgttattgactcaggaaagatgaaagagaagtctttt
gatgcgctgacttgcgttacaatgctaaaaatggtgtggatttcgaaagccagtgctatc
cagagaaaaggcagggctgggcgctgtcagcctggagtctgttttcgtctcttcagcaga
ctccgatttcagaatatgttggaatttcagactccagaacttctaagaacgccacttcag
gagctttgtttacacacaaaacttctggctccaattaattgtccaattgttgacttcctt
atgaaagctcctgatcctccaccagctttaattgtgagaaatgctgtgcaaatgcttaag
acaatagatgccatggacccttgggaagatctcactgaacttggttatcatctcactgaa
ttaccagtagagccacaccttggtaaaatggtgttgtgtgcggttgttttgaagtgcctg
gatcctatccttactattgcttgcactcttgcatatcgagacccttttgtcctacctaca
ctggcctctcaaaagcgcgcagccatgctgtgtagaaaacgttttactgcaggaacattt
agtgaccatatggcacttctcagggctttccaggcgtggcagaaggcacgcagtgatggc
tgggagagagccttctgtgaaaagaacttcctatctcaagctacaatggaaatcatcgta
ggaatgagaacgcagttgcttggccaacttagagcctcaggttttgttagagccagaggt
ggagctgatatcagagatgttaatactaactctgaaaactgggctgtagttaaagctgcc
ttggtggctgggatgtatcccaatctagtgcatgtggatagagaaaacctggttttgact
ggaccaaaggagaagaaagtgcgatttcatcctacctctgttcttagtcaacctcagaat
aaaaagattcccccagcaaatgggcaagctgcagccattcaggcactccctacagactgg
cttatatatgatgaaatgacgagagctcacaggatagcaaatatcagatgctgttctgtt
gtaacacctgtcactgtgtcactcttctgtgggccagctagattaccaagtaatgctttg
caggaacctgcatcctttcgaggggatggggtatctaatgataacagtgatagtgagatg
gaggacaaaacaactgctaatttggcactactgaagctagatgaatggctccagctcaaa
ttggaccctgaagtaagtaatatatcacttcagtgcttgtttcttcttggagttttggtc
catttccatgagttagcagattctgatgaaactgccagacaaaagataatggctgcagga
gacagcaagctgcagatgatagtggctgcataa
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