Chlamydotis macqueenii (Macqueen's bustard): 104481914
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Entry
104481914 CDS
T08437
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac03013
Nucleocytoplasmic transport
cmac03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104481914 (UPF3A)
03015 mRNA surveillance pathway
104481914 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmac03019
]
104481914 (UPF3A)
Messenger RNA biogenesis [BR:
cmac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104481914 (UPF3A)
mRNA cycle factors
P-body specific factors
104481914 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
104481914
NCBI-ProteinID:
XP_010121546
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MQVVIRRLPPCLTKEQLEEQLHPLPAHDYFEFCTADPSLYPHLYSRAYINFRNPEDILLF
RDRFDGYVFIDNKGLEYPAVVEFAPFQKISKKKLKKKDAKAGSIEDDPEYRKFLESYCAD
EEKICANPEILLGEIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRRRELEKK
RLREEEKRKRREEERRKRKEVEKQKKISEKEIRIKLLKKPEKGDEVASEKHKEKGEEADI
EENKWDKSPGSGSIKSKSLEGSLKELKEKSQNDSDKEQRDLERRFREKEPERQRYRLDDG
RKHRAHYEFDKFVRRNEEELKWGKGYNQDRGKKGNYNYSFTVEAVDKLGKEDKCDDMASK
KERIRNKDRPAMQLYQPGARIRTHTGSASKTYDCSGKSFEDALDKKYEADNSAGGGSEKS
EEAE
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtagttattcgacggcttcctccttgtctaactaaggagcaactggaggaacag
ctacatcctttacctgcccatgattattttgagttttgcactgctgatcccagcctttat
cctcatctctactcaagagcatacattaactttagaaatcctgaggacatccttcttttt
agagatcgctttgatggctatgtcttcattgataataaaggtttggagtatcctgcagtg
gttgaatttgctccattccagaagatttcaaaaaagaagctgaagaagaaagatgccaaa
gccgggagcattgaagatgatccagaatataggaaatttttagagagttattgtgctgat
gaagagaaaatctgtgccaatcctgagattcttttgggagagattgaggccaaaacaagg
gagctcattgctagaagaacaacaccccttttggaatatattaaaaatagaaaattagaa
aagcagagaatacgagaagagaaaagagaagaacgaaggcggagagaactggagaagaaa
cgtctgcgggaggaagagaaaaggaagcgcagagaggaagaaagacgtaaaagaaaagaa
gtggagaagcaaaagaagatttctgaaaaagaaataagaatcaagcttcttaagaagcct
gaaaaaggagatgaggtggccagtgaaaagcacaaagaaaaaggtgaagaagctgacatt
gaagaaaacaaatgggataaatcacctggatctgggagtataaaatccaaatcattggaa
ggttcactaaaagaacttaaggaaaagtcacaaaatgatagtgacaaagagcaaagagat
ttggagagaagatttcgagaaaaagaacctgaaagacaaaggtatcgattggatgatggc
agaaagcatagagctcactatgagtttgacaagtttgtgagaaggaatgaagaagagctg
aaatgggggaaaggatacaaccaagacagaggaaagaaagggaactacaactacagcttc
actgtggaggcagtagacaaactgggtaaagaggacaagtgtgatgacatggcatccaaa
aaggagcgcataagaaataaggatcgcccagccatgcagttgtaccagccaggagctcgc
attcgaacacatacgggatctgcaagtaaaacctatgactgcagtgggaaatcctttgaa
gatgctcttgataaaaagtatgaggcagataattcagctggaggtggttctgagaagagc
gaagaggcagaatga
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