Chlamydotis macqueenii (Macqueen's bustard): 104482057
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Entry
104482057 CDS
T08437
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac04510
Focal adhesion
cmac04512
ECM-receptor interaction
cmac04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104482057 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104482057 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104482057 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmac04147
]
104482057 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
cmac00536
]
104482057 (COL4A1)
Exosome [BR:
cmac04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104482057 (COL4A1)
Glycosaminoglycan binding proteins [BR:
cmac00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104482057 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104482057
NCBI-ProteinID:
XP_010121774
LinkDB
All DBs
Position
Unknown
AA seq
1615 aa
AA seq
DB search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NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggacctgaaggtccccctgggccaccagggcttaagggtgatactggagaacca
gggctgccaggaacaaagggaacaagaggccccccaggagcatcaggctttccaggaaat
ccaggccttcctggccttcctggacaagatggccctcctggtccacctggcattccagga
tgtaatggcacaaagggtgaaagaggtccagtaggtcccccaggtttaccaggactgact
gggagcataggacctccaggacctcctggaatgaagggagatccaggtgaagtgattggt
cttttacctcctagtgtgctaaaaggtgataaaggctttcctggccaacctggactacct
ggtccacctggagcttcagggtttcagggaccaatggggccccaagggcctccaggagat
ccaggtcccccagggccaccaggactcccgggtgagaagggctacatgggcttgggcttt
caaggtccaaaaggtgaaaagggagaacaaggggtaaggggccccccaggcccaccagga
ccagcaccacatatgaaagaaaaagggactgaagtcataaagggagaaaagggtgaacca
ggtgaaaagggtgaacagggaaacccgggattgccaggttcaggtttcaaaggagaaaag
ggtgaacctgggaagcctggtccacgtggaaagcctggaaaagatggtgaaccaggacca
aaaggggaaactggtttgcctggtggatttgggattccaggacgacccggggagcctggt
gcgaagggtgacaaaggtgaacgaggttttccaggacctccaggaagagttatagatcct
ggaccagtagatacttttggtgaaaaaggagagcctggactttcaggtttgcctggactg
aaaggtcaaaaaggtgaaaaaggtttccctggtatacaaggaatcccaggacctccaggt
cgaccacttccagatagggtaggatcacctggtgtccctggagagagaggtgaaaaaggt
gaaaagggttctccaggattctctttacctggaccccctggaagagatggtttcccaggt
ccccctgggttgcctggcccaccaggtcctccaggcagaacagatggaattgatcaatgc
cagcagggagaaccaggtgcaccaggtagtcctggacctccaggaagagatggatttcca
ggagagatgggagagaaaggtgacaaaggtgaaacttgtgccttatgtgatcaagtagga
cctcctggacttccaggaccacaagggccaccaggtcccgcaggttttccaggacaatca
ggtttgaagggtgacagaggcttacctggacttgatggccttccaggggtacctggcccc
cccggcactccaggacttatgggcagccctggagcaaaaggagaaccaggagattttact
tatgattctatcctgaaaggtgaaaagggagagcctggtttcccaggacaacctggtatt
cctggaagagaaggaagaccaggaaaagacggattgccaggtctccagggtccaaaagga
gcatcgggtacagttggcttgaaaggagaacgtggtccccctggccaacctggattccct
ggagtacgtggtgaaagaggttttcccggccctcctgggataggtgctgcagggttgcct
ggtgacaaaggagacagaggctttgctggaaccccaggtctaccaggccttccaggtgca
aagggtgaagcaggacgaactgtaccgctccctggacctcctggggcagatggccttcct
ggaccacctggtttccctggacctcaaggtgacaaagggaatcctgggcttccaggtaga
cctggcctgccaggagaaaaaggtgctattgggcagccaggtatagggttccctggacct
ccaggacccaaaggtttccaaggtcagcctggctcgcctggtctgccgggaactccagga
actcctggtttggatgggttgccaggtgtaccaggtttacaaggtcaaaaaggtgaacct
ggtgtaggtctccctggccctaagggattgccaggccccccaggaccggctggcatccct
ggagaaaagggaagtccaggactgcctggcttacgtggcgagcaaggctttccaggcata
cctggacagcaaggattcagaggcgaccctggcctcccaggactgcaaggcttgcaaggc
cctcccggtgcaccggggctgggcccacggggatcaccgggacccgctgggcaaccagga
ccccagggaccaccaggatttcctggaataaaaggagaaaggggcttccctggtatccca
ggtctagatatgccaggaccaaaaggggaaaaaggtagccagggccagcccggagtaccg
gggtctgtggggttacctggcctgccaggtccacagggggccattggactgaaaggatca
gcaggagccaaaggagaaatgggagttatgggaactcctggattgccaggaactcctgga
ccagttggagatcgagggttgccaggtgaaaaaggtagccaaggtttgaaaggtgtagtt
ggaccacagggtgatcctggtatcaaaggagataaaggtgaagctggtctcccaggagaa
cctggaacaatggacaacatggacatggttagtctcaaaggccaaaagggagaacaagga
gaaaaaggggaccatggagcaacaggagaaaaagggttacgtggggaatacggagagcca
ggaattccagggaaggatggtgagcctggtactccaggacatccaggaccaaaaggtgat
cagggccctcctgggtacccaggggatccaggaattccaggacaaaaaggatcagttggt
gaaatgggtttgccaggaacccctggagaaaagggtctgccaggagtaccaggttcacca
ggcacaccagggttccctgggcaaaaaggtgaaaaaggagacaaaggagcaccaggtttt
cctggaattggctttccagggtctcctggtgagaagggagaaccaggaagaactggtagt
ccaggtttatctggagataagggtgaaaaaggtagcgtgggaattcctggaatgccgggt
ctcccaggtcccaaaggatcccctgggatagcagggtttccaggcaaccccggccgccat
ggagaaaagggtgaaaaaggacttcctggcttaagtggcattccaggtttaaaaggagaa
ccaggtgaacctggtgttccgggtcctgctggttccattggacagaagggtgaaccaggt
tatgatgggattccaggtgcagctggtgcaaagggtgaacaaggtattccaggtagagga
cttccaggctttccgggtgcaaagggagataaaggtgcaaaaggtgacgtgggttttcca
ggatccccaggaagtccggggatcccaggcctgaaaggagaaccaggatttgatggtcca
ccaggccctaagggcagccaaggtcttcctggactaccaggaagtgcaattgagggccct
aagggagacagaggaccccaaggccaacctggccttccaggtttaccaggtccaacaggg
ccaccaggacccccaggtctgaaaggggccaaaggagagcaggggagcaatggctggcct
gggactcctgggagtccgggagtcaaaggtgatccgggtttccagggactgccaggtagt
cctggtttaccaggagatattggtcaaaagggtgatctgggacctccaggagttccagga
gttccaggtccaaaaggatctcctggcttcccaggccttaagggtgagcgaggtgaccaa
ggtcttccaggatctaaaggtttacaaggcccaccaggcccgccaggtgcttttcagctt
gttaaaggggatcctggattacctggccctgtaggaccagttggtctcaaaggattccca
ggacttccaggtcccaaaggacagcaaggagtgacaggaccttcaggtgtacctggacca
cctggtagtccagggtttgatggtaaacctgggcaaaaaggagaagttggtccttatggt
cccccaggccccagaggattccctggtccccctggtcctgaaggtttgcctggggctatg
ggcccaccaggtgcaccatctgttgctcatggcttccttgttacgagacacagtcaaacc
actgaagaaccatcgtgtccattcggaacaaggctgatttaccatggctactccttgctt
tatgtacaaggcaatgaaagagcacatggccaagatctgggcacggcaggaagctgtctt
cgtaaatttagtaccatgcctttcttattctgcaatatcaacaatgtatgtaactttgca
tcaagaaatgactattcctactggttgtccactcctgaacccatgccaatgagtatggct
cctatcactggtgataatatcagaccattcatcagcagatgctctgtgtgtgaagctcct
gctatggtaatagctgttcacagtcaaacaattcaaataccaccgtgtcctgaaggctgg
agttcactttggattggttactcctttgtcatgcacaccagtgctggtgcggagggctct
ggccaggccctggcatctcctggttcctgcctagaggagtttcgtagcgctcccttcatt
gaatgccatggccggggcacctgcaattattatgcaaatgcttacagcttctggcttgcc
actatagagaggaatgagatgttcaagaaaccgactccctcaactttgaaagcaggggat
ctgcgctcaaatgttagccgttgtcaagtctgtatgagaaaaacataa
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