Chlamydotis macqueenii (Macqueen's bustard): 104482409
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Entry
104482409 CDS
T08437
Symbol
BRIP1
Name
(RefSeq) LOW QUALITY PROTEIN: Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac03440
Homologous recombination
cmac03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104482409 (BRIP1)
03460 Fanconi anemia pathway
104482409 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmac03400
]
104482409 (BRIP1)
Enzymes [BR:
cmac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
104482409 (BRIP1)
DNA repair and recombination proteins [BR:
cmac03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
104482409 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
104482409 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
HBB
Motif
Other DBs
NCBI-GeneID:
104482409
NCBI-ProteinID:
XP_010122192
LinkDB
All DBs
Position
Unknown
AA seq
1269 aa
AA seq
DB search
MSSDVSEYTIGGVKIMFPCKAYPSQLAMMNAIVKGLNNKQHCLLESPTGSGKSLALLCSA
LSWQQSLHEKSLRTSSCEKEDRKPETSLPCCCTCHSQSKSNEPATSENHGASCSYNSSET
GSSMKPGSPLTNTECKENETLASKLSAKKRLSRCNNENDDFQVDRKRIRPLETEQQVRKR
HCLAKGVQLVDALEVYNQRKNGELIVRSEKSVKPTTFSTKTSSAPCTECSCSSGKETDKD
TSNTKKKANGDRLFIPKIFFGTRTHKQISQITRELKRTAFSSVPMTILSSRDYTCIHPVV
SNSGSNRNEMCVELLEGKHGKSCLYYHGVHKLCEHHALQSAHGVYRAWDIEDLVSLGKKL
RACAYFAARELMVGADIVFCPYNYLLDPQIRESMEINLKGQVVILDEAHNIEDCARESVS
YSVTENQLRAAREELDSMVNNNIRQKDHEALRAVCCSLTNWLQESSSQLVERGYETSCKV
WSGKEMLPILHKMGITGITFPILQKHLATVLEKEEKISVLGKEELIEIPVVSPATQIVLK
GLFMVLLCLFKDDSRYADDYRVALQQTYAWMSENQLDVSDTSAFFTRPKHKRSSRQKTVV
HMLNFWCLNPAVAFSDLSDVRTIVLTSGTLSPMDSFSSELGVKFSIQLEANHVIRNSQVW
VGTIGAGPKGRKLCATFQHTETFEFQDEVGALLLSVCQTVGQGILCFLPSYKLLDKLKDR
WMHTGLWRDLELVKTVIAEPQGGAKSDFDELLKLYYDAIKCKGEKDGALLIAVCRGKVSE
GLDFCDENARAVITIGIPFPNVKDLQVELKRKYNDLHKNTRGLLPGSQWYEIQAYRALNQ
ALGRCIRHRNDWGALILVDDRFRNNPNKYITGLSKWIRQQIQHHENFGSALESLQAFAKR
NQKGIDCPLECSSEFLHVPSNSKDLSQASQQEATIHLTPDVPAKSEEQNLVSEKNFTATV
NSVNPTVSNQPSGQKVDVESHSHHVTQRRKHMGSTPQMPATKIEREKKNDWANVDIMKEH
CCFQPLTSTPLPVAKNCVSTASSKQKNVTRASELIGSVNQCQSSLISEHKPSVRESCGET
TNFSVENTEAPVAEEHLEKLRLQVEPCNEFPSAGXXXXXXXXXXSVLNVSAEAEDEDESI
YFTPELYDDVDSEEGAISPRVPTRNTNENQIECGNSTVTGDLFEINTSETLRVTEKMIDY
DDGRRTSLHGIMQNERSKSSAVNTVEMTTEIEAEQIASQEMGTKKQKISLSRSRNKGVSS
FLLDNSSTW
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgatgtgtcagaatatactattgggggagtgaagatcatgttcccttgcaag
gcttacccttcacaacttgctatgatgaatgctattgttaagggcttaaataacaagcag
cactgcctgttggagagtcctacaggaagtggtaaaagcttggcattactttgttctgcg
ttatcctggcagcagtctctgcatgagaaatcactgcgtacatcgtcgtgtgaaaaggaa
gacagaaagccagagacctcactgccgtgttgctgtacgtgtcattcgcaatctaagagc
aacgagcctgcaacaagtgagaatcatggtgcttcttgttcttataatagttctgaaaca
ggaagttccatgaaacctggaagccctctaacgaacacagaatgtaaagaaaatgaaacg
ctagcttcaaagttgtctgccaaaaaaaggttatctcgatgtaacaatgagaatgatgat
tttcaagtagacaggaaaaggattcgtcctttagaaactgagcagcaggttagaaaacgt
cattgtttggcgaaaggagtgcagttagttgatgctttagaagtttataatcagagaaaa
aatggagagctgattgttcgctctgaaaaaagcgtgaaacctactactttttctaccaaa
acatcttctgctccttgcactgaatgttcctgttcttctggaaaagaaactgataaagat
actagtaatacaaagaagaaagcaaatggagatcggttgttcattcccaaaatttttttt
ggaacacgaacgcacaagcaaatatcccagattaccagagagttgaagagaacagcgttt
tccagtgtccctatgacaattctttctagccgggattacacctgtattcatccggtggta
tctaacagtggtagtaacaggaatgaaatgtgtgtggagttgctggaaggaaaacatggc
aagtcctgtctttactaccatggtgttcataaactctgtgaacaccatgccctgcagtct
gcacatggggtgtatcgggcttgggacatcgaagatctagtgagcctgggaaagaagctt
cgtgcctgtgcatattttgcagccagagagctcatggtgggcgcggatattgtattttgt
ccttataattatctcctagacccacagatacgggagagtatggaaattaacctgaaaggc
caagtagtcattttagatgaagcccataatattgaggactgtgctcgggagtcagtgagc
tacagtgttacagaaaatcaactgagagctgctcgagaagagctggattccatggtcaat
aacaacatcaggcagaaggatcatgaggccctgcgggcggtgtgctgctctttgacaaac
tggttacaggagagctctagtcaactagtagaaagagggtatgaaacttcctgtaaggtc
tggagtggaaaagaaatgctccccattttgcacaaaatgggaataactggtattactttt
cccattttacagaaacatcttgctactgtcctggaaaaagaagaaaaaatatcagtgctt
ggtaaagaggaacttattgagataccagtagtaagccctgccactcagattgtgctgaaa
ggattattcatggttcttttatgtctttttaaagatgatagcaggtatgcagatgactac
agagttgctctacaacaaacttacgcttggatgagtgaaaaccaacttgatgtttcagat
acaagtgccttctttacacgacccaagcataaaaggagttcgcggcagaagactgtagtc
cacatgcttaatttttggtgcttgaaccctgctgtggctttttcagacttaagtgatgtt
agaacaattgttctgacatctggtacgctctctccaatggattcgttttcttcagagctt
ggcgtgaagttttctattcagctggaggcaaatcacgttattcggaactcacaggtttgg
gttggcaccattggagcaggccctaaaggtcggaagttgtgtgccacgttccagcataca
gagacctttgagttccaagatgaggtgggagcgcttctgctttcggtgtgtcaaacagtt
ggccaaggaattttgtgctttttgccatcctacaagctgctggacaaattaaaagatcgt
tggatgcacactggcttatggagagacctggagctggttaagacggtcattgcagagccg
cagggaggggcgaagagtgactttgatgaactgctgaaattatactatgatgcaataaaa
tgtaaaggagaaaaagatggagcactccttatagctgtgtgcagaggaaaagttagtgaa
ggcttggatttctgtgacgagaatgcccgtgcagttataaccataggtattccgtttcca
aatgtgaaagaccttcaggttgaattaaaaaggaagtacaatgacctgcacaaaaacaca
agaggccttttaccaggaagtcagtggtacgaaatccaggcttatagggctctgaaccag
gccctgggaaggtgtataagacacaggaatgactggggcgctcttattttagttgatgac
cgcttccggaataacccgaacaagtacataactggtttatctaaatggattcgtcaacaa
atccagcaccatgaaaattttggtagtgcacttgaatccttgcaggcatttgctaaaaga
aaccagaaaggcattgattgtccattggagtgcagcagtgaatttctccatgtaccttca
aattcaaaagacctgtcacaagcctctcaacaggaggcaactattcatctgacaccagat
gttcctgctaaaagtgaggagcaaaacttggtttcagaaaagaattttactgcaaccgtc
aactcagttaatcctacagtgtcgaatcagccaagtggccagaaagttgatgtggagagt
cattctcaccatgtaacacaaagaagaaaacatatgggctccacaccccaaatgccagca
actaaaatagagagagaaaaaaagaatgattgggctaatgttgacattatgaaagaacac
tgctgctttcaaccactgacttcaacacctttgcccgtagccaagaactgcgtgtccaca
gctagtagcaaacaaaaaaacgtgaccagggctagcgaacttattggtagtgtaaatcaa
tgccagtcatcattaatttcagaacataaaccaagtgtacgagaatcatgtggggaaaca
actaatttctctgttgaaaatactgaggctccagttgctgaagagcatcttgaaaagcta
cggcttcaagttgagccctgcaatgagtttccttcagccggannnnnnnnnnnnnnnnnn
nnnnnnnnnnnntcggtgttaaatgtgtctgcagaagctgaagacgaggatgagagtatt
tacttcacaccagaactctatgatgatgtagattcagaggaaggggcaatcagcccacgg
gttccaacccgtaatacaaatgagaatcagattgaatgtggaaactccacagtcactggt
gatctgtttgaaatcaacacctcagaaacactaagggtgacagaaaaaatgattgattat
gatgatggcagaaggacaagtttacatggaataatgcaaaatgagaggagtaagagtagt
gcagttaatactgtagagatgactactgaaatagaagcagagcagatagcgtctcaggag
atgggcaccaaaaaacagaaaatcagtctttccagatcacgaaataaaggtgtgtcgtct
tttctattggacaattccagcacatggtga
DBGET
integrated database retrieval system
