Chlamydotis macqueenii (Macqueen's bustard): 104482998
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Entry
104482998 CDS
T08437
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104482998 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmac03041
]
104482998 (CDC40)
Spliceosome [BR:
cmac03041
]
Complex C
Other components
Step II factors
104482998 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
EIF3I
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_NWD2_C
Beta-prop_Vps41
PQQ_2
Motif
Other DBs
NCBI-GeneID:
104482998
NCBI-ProteinID:
XP_010122957
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHINDFMFEQQRRTFATYGYALDPSIDNPE
VATKYIGSVEEAEKNQGLTVFETGQRKIEKRKKFKENDASNIDGFLGPWAKYVDEKEVAK
PSEEEQKELDEITAKRQKRGKLEDDKPGEEKTILHVKEMYDYQGRSYLHVPQDVGVNLRS
TVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHILLSCSMDCKIKLWEVYGDRRCLRT
FIGHGKAVRDICFNNAGTRFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDK
QNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEW
DIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMV
AGYACQVDFSPDMSYVISGDADGKLNIWDWKTTKLYSRLKAHDKVCIGAVWHPHETSKVI
TCGWDGLIKLWD
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcccctgagtttggaccagaaaacccatttaggactcagcaaatggctgcacct
agaaatatgctttctggatatgcagaaccagctcacatcaatgatttcatgtttgaacaa
caaagaagaacatttgcaacctatggttatgctttagatccctctatagataaccctgaa
gttgctaccaaatatattggttctgtagaagaagctgaaaaaaatcaaggtttaacagtg
tttgaaacgggacaaaggaaaattgaaaaaaggaagaaattcaaggagaatgatgcatct
aatatcgatggttttctgggaccgtgggcaaagtatgttgatgaaaaagaggtagccaaa
ccatcagaagaagaacagaaagagttggatgaaataacagctaagaggcagaagagagga
aaactagaagatgataaacctggagaggagaagactatattacatgttaaggaaatgtat
gactatcagggaagatcttatcttcatgtccctcaagatgttggagttaatctccgttct
acagtgccacctgagaagtgctatcttccaaagaaacaaatccatgtgtggtctggacat
acaaagggtgtcagtgcagtcagattgtttcctctctctgggcatatactgttgtcttgc
tctatggattgcaaaattaagttatgggaagtatatggtgaccgaagatgcctacgaaca
tttattggacatggtaaagctgttcgagacatctgttttaataatgctggcactcggttt
cttagtgctgcatatgaccgctatcttaaactctgggacactgaaacagggcaatgtatt
tcaagattcaccaacaggaaagttccttattgtgtcaagttcaatcctgacgaagacaaa
caaaatctctttgttgcaggaatgtcagataagaaaattgtgcagtgggatattcgaagt
ggtgagattgtgcaggaatacgataggcatttgggagctgtcaacaccattgtgtttgtg
gatgaaaatagaaggtttgtgagtacatctgatgacaagagtttaagagtctgggaatgg
gacattcctgtagacttcaagtacatagctgagccgagtatgcattcaatgccagccgtg
actttgtctccaaatgggaagtggttggcttgccagtcgatggataaccaaattctgatt
tttggagctcagaacagattcagattaaacaaaaagaaaattttcaaaggtcacatggtt
gctggctacgcttgtcaagtggatttttcacctgacatgagctatgtgatatctggagat
gcagacggaaaacttaacatctgggactggaagacaacaaaactctacagcagattaaaa
gcacatgataaagtctgtatcggtgcagtgtggcatccacacgaaacatctaaagtcatt
acatgcggctgggatggtcttattaaactatgggactaa
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