Chlamydotis macqueenii (Macqueen's bustard): 104483317
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Entry
104483317 CDS
T08437
Symbol
ERCC3
Name
(RefSeq) TFIIH basal transcription factor complex helicase XPB subunit
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac03022
Basal transcription factors
cmac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104483317 (ERCC3)
09124 Replication and repair
03420 Nucleotide excision repair
104483317 (ERCC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmac03021
]
104483317 (ERCC3)
03400 DNA repair and recombination proteins [BR:
cmac03400
]
104483317 (ERCC3)
Enzymes [BR:
cmac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104483317 (ERCC3)
Transcription machinery [BR:
cmac03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104483317 (ERCC3)
DNA repair and recombination proteins [BR:
cmac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104483317 (ERCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
AAA_34
Motif
Other DBs
NCBI-GeneID:
104483317
NCBI-ProteinID:
XP_010123358
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MTPPAPRPQQSPRQGPPPFGGQDKAIVHAYKGEAPDGHIFLEAFSPVYKYAQDFLVAIAE
PVCRPTHIHEYKLTAYSLYAAVSVGLQTSDITEYLQKLSKTGVPDGIIQFIKLCTVSYGK
VKLVLKHNRYFVESTHPDVIQQLLQDHVIRDCRLRNAEGEETELITETFTSKSAISKSSE
GGFGPSTSQGTDAQNKPDVPADLFEFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCI
HLEYPLLAEYDFRNDSVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAG
KSLVGVTAACTVRKRCLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSI
AISTYSMLGHTTKRSWEAERVMEWLKSQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLG
LTATLVREDDKIVDLNFLIGPKLYEANWMELQNSGYIAKVQCAEVWCPMSPEFYREYVAI
KTKKRILLYTMNPNKFRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLGKPYIYGPTA
QGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLR
AKKGMVAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEELSFSS
KEEQQQLLQKVLQASDLDAEEEVVAGEYGSKSAQVSRRAGTMSSMSGADDTVYMEYHSSR
SKASSNKHIHPLFKRFRK
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgacaccaccagcccctcggccccagcagtcgcctcggcagggcccccctccttttggg
ggccaagacaaagcaatagtacatgcatataaaggagaggctcctgatggccatattttt
ctggaagccttttctccagtttacaaatatgcacaggattttttggttgccattgctgag
cctgtgtgcagaccaacccacattcacgagtacaagctgactgcttattcactctatgct
gctgttagcgttggcttacaaaccagcgacatcacagagtacttgcaaaaactgagcaag
actggtgtcccagatggaataattcagtttatcaagctgtgtactgtcagctatgggaag
gtgaagctggtactgaaacataacaggtatttcgtggaaagtacccaccctgatgtcatt
cagcagcttctgcaagaccatgttattagagactgtcgcctgagaaatgcggagggtgaa
gaaacagagctcattacagagacattcacaagtaaatcagcgatttccaagtccagtgaa
ggtggctttggtccgtcaacatcacagggaacagatgctcagaataagccagatgtcccg
gctgacttatttgagttctatgaacagatggacaaagatgaggaggaggaggaggaaacg
cagacagtatcttttgaagtcaagcaggagatgattgaagaacttcagaagcgttgtatc
catttggagtaccctttgctggcagaatatgatttcagaaatgattccgtgaatcctgat
attaatatagatctgaaacctacagctgtcctcaggccctatcaagagaaaagcctgcgg
aagatgtttggaaatggacgagccagatccggtgttattgtcttgccatgtggtgctggc
aagtctctagttggagtgacagctgcatgtactgtccgcaagcggtgcctggtcctgggt
aattctgcagtgtctgtggagcagtggaaagcccagttcaagatgtggtccaccattgat
gacagtcagatatgtcggttcacttctgatgccaaagacaagcccattggctgttctatt
gccatcagcacatattccatgttgggacacacgaccaaaagatcctgggaagcagagaga
gtaatggagtggcttaaaagccaagagtggggccttatgatacttgatgaagtacatact
attcctgcaaaaatgttcagacgtgtgctcactattgtacaagctcactgtaaactgggg
ctgactgctaccctggtcagagaagatgataaaattgttgacctgaacttcctgatcgga
ccaaagctctatgaagccaactggatggagctgcagaacagtggctacattgctaaagtc
cagtgtgctgaggtttggtgcccaatgtcacctgaattttatagagaatacgtagctatc
aaaacaaagaaacggatactgctgtacaccatgaacccaaataaatttagagcctgccag
ttcctgattaagtttcatgagcgacgaaatgataaaatcatcgtatttgctgacaatgtg
tttgcactgaaggagtatgcaatcagacttgggaaaccctatatatatggtcctactgca
caaggagaaagaatgcaaattctacaaaacttcaagcacaatccaaaaatcaacactatt
ttcatttccaaggtaggtgacacatccttcgatctgccggaagccaacgttctgatccag
atttcatcccatggtgggtctcgaagacaggaggctcaaagactgggacgagtgctgaga
gccaaaaaaggcatggttgcagaggaatacaatgcctttttttattctcttgtatcccaa
gacactcaggaaatggcatattcaacaaagcgacaacggtttcttgtagatcaaggttat
agcttcaaggtaataacaaagcttgcaggcatggaagaagaagaactttcgttttcatcc
aaagaagaacagcagcagcttctccagaaagtcctgcaagcatctgacctggatgctgag
gaggaagtagttgctggagaatatggctcaaagtcagctcaggtgtcacgtcgtgcaggc
acaatgagctccatgtcaggagcagatgatacagtttacatggaataccactcttcacgg
agtaaggcatcttcaaataaacacatccatccgctctttaaacgcttccggaaatga
DBGET
integrated database retrieval system
