Chlamydotis macqueenii (Macqueen's bustard): 104483489
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Entry
104483489 CDS
T08437
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmac03019
]
104483489 (HELZ)
Messenger RNA biogenesis [BR:
cmac03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
104483489 (HELZ)
3'-5' decay
Other 3'-5' decay factors
104483489 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
zf-CCCH
AAA_30
AAA_19
UvrD-helicase
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
zf-CCCH_4
AAA_22
AAA_16
AAA_5
AAA_7
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
104483489
NCBI-ProteinID:
XP_010123578
LinkDB
All DBs
Position
Unknown
AA seq
1940 aa
AA seq
DB search
MADRRPEKSCEQACESLKQQDYEVAVKHCTEALLSLSQYPPAHLPEACQAEIDRIKIETL
LYRIASFLQLKKYGQADEDCRHVLGEGLAKGDGSFRAVLCCMHLKGKLQIVSNVLSKSLM
GESLNGMVTKDLTRLKTLLAETEAAGKVPSGYHVEDLEEGSRDGWQFRPPPRGVTSSEEY
TLCKRFLEQGICRYGAQCTSAHSQEELTEWQKRYASRLIRLKQQKENKQCSGSYMETLIE
KWMNSLSPEKVLSECVEGVRVEHNPELSVTVTTKKSHQTWTFALTCKPARMLYRVALLYD
AHRPHFSIVAISAGDSTTQVSQEVPENCQEWIGGKMVQNGIDHYIYKVSIAFNTEIFGTF
RQTVVFDFGLEPVLMQRVMIDAASTEDLEYLMHARQQLLTTAKRWDSTSKTIVEFEPNET
TELEKSLLTRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNIK
VQLQIVASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVTK
EKSAQTQGTKEKVYEAAIEEKTKDYIFLRVSRECCEELNLRADCEMQVELQFQLNRLPLC
EMHYALDRIKDNSILFPDVSMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQL
PPVLIIGPYGTGKTFTLAQAVKHILQQQDTRILICTHSNSAADLYIKDYLHPYVEAGNPQ
ARPLRVYFRNRWVKTVHPVVHQYCLISSTHSTFQMPQKEDILKQRVVVVTLNTSQYLCQL
DLEPGFFTHILLDEAAQAMECETIMPLALANKNTRIVLAGDHMQLSPFVYSEFARERNLH
VSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYPLT
FFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQVF
RIRAELRKKRLSDVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKRKEQLLEDSTE
DLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENESLHGIT
FEQIKAQLEALELKKTYVLNPLAPEFIPRALRHQHSANATKQQQSPPKGKVHHHNQNDHF
PPDGIVQPNPSVLIGNPIRAYTPPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVYG
GNMVMSVPLPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQAHGRGSPIPYGLGHHSPVS
IGQQQQLQHPDKEQHEQSRNGKSENTAGPEINKIRTPEKKPVESKQVDLEANSQNRSPES
RSSAGYPNAKFHRKDNLNPRQLNLHLTPPHSQYAVPNRHFQHLSQIPRQPYPLQQQQNLL
NQQQNHLPEQQNQMPPQQSQVVQQHNHLNQQPPQPSQLSPAYQAGPSQSFFNNPIPHRPH
SPAVDAVISEHPPPMLQEVNNPLRPIAQHNPVLPTHLNNFIEENPSGMPLGDTLDRMHGN
VALETIRQQQQARLQQWNEHNAYLSQGTIPYQHHHHPHLPHLPQQPIGLHQQQQVRANWK
LASNTEDETEATYSRFQDLLRELSHRDQSESRDLAEMPPPQSRLLQYRQVQPRSPPALPS
PSCNSNHSGHFPNFTENNRDIEIPSNPAFQQHLPQIYNPPFSMPSEHITPSPLKYLQPDG
SWTYANLQQNHLMGQGFHYGIPPLPHRSQQNPFIQIQNHPHAVGQEPFHPLTSRAVSASS
LHSLEEYEPRGPGRPLYQRRISSSSVQACSEELSTPQDSLGQCKELQDHNNQSSFNYSSP
ELWVNSSSSAPYPNIPCNGANRAVPPRELLAPPKTVKPPEEHLKAENIQLSNSFNYSVLQ
HLGQFPPLMPNKQIVESNSSSQQNAGGSKPVMSYASALRAPPKPKPPPEQTKKNSDPLSL
FQELSLGSSSGSNGFYSYFK
NT seq
5823 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagaagaccagagaagtcatgtgaacaagcatgtgaatctcttaagcagcag
gattatgaagtggcagtgaagcattgcacagaggctctcctttccctcagccagtacccc
ccagctcacctcccggaggcatgccaggcagaaatcgaccgcatcaaaatcgagactctt
ctgtatagaattgcttcctttttacaacttaaaaagtatgggcaagcagatgaagactgt
aggcatgtgctgggagaggggctggccaagggagatggatctttccgtgcagtgctctgc
tgcatgcatcttaaagggaagctgcaaattgtgtctaatgttctttccaaatcactgatg
ggtgaatcactgaacgggatggtaactaaagatctgacacgactgaaaacacttcttgct
gaaacagaggcagctggtaaagtaccatcaggatatcatgtagaagatttagaagaaggg
tcccgggatggctggcagttccgccctccacccaggggagtcacaagcagtgaagaatat
acgctatgtaaaagatttttagagcaagggatctgcaggtacggtgcacagtgtacttca
gcacattcccaggaagagctaacagaatggcaaaaacgatatgcttcccgcttgatcaga
ttaaaacagcagaaggaaaacaaacaatgttcgggcagttatatggaaaccttgattgag
aaatggatgaattcgttatctcctgagaaagtgcttagtgaatgtgtagaaggagtgaga
gtagaacataatcctgagctatcagtaactgtcaccaccaaaaaatctcatcagacatgg
acatttgctctcacttgtaagcctgcaagaatgctgtatcgagtggcattgctttatgat
gcccatcgcccacattttagtatcgttgcaatatctgctggagacagcactacccaggta
tcccaagaagttccagaaaactgtcaggagtggataggaggaaagatggtccagaacgga
atagatcattatatatacaaagtcagtatagcctttaacacagaaatctttggaactttt
cgccaaactgttgtgtttgattttggattagaaccagtcctcatgcaacgagtaatgatt
gatgctgcttcaactgaagatcttgaatacctgatgcatgcacggcaacagctactaacc
acagctaagcgttgggattctacttctaagactattgtagaatttgagcctaatgaaact
actgagttggagaagagccttcttaccagataccaaatccctctgtctgctgaccagcta
tttacacaatctgtcctggacaaatcattgaccaagaccaactatcagtcgcggctacac
gacctcctttatatagaggaaatagcacagtataaggaagttagcaagttcaacataaaa
gtgcaattgcagattgtagcaagtttcatgctcactggtgtttctggaggtgcaaagtat
gcccaaaatggacaactttttggccgctttaagctcactgaaacgctttcggaagacact
ttggctggacggctggtgatgaccaaagtcaatgctgtttatttattgcctgtcactaaa
gagaagtcagcgcagacccaaggaaccaaagagaaggtttatgaagcagctattgaggag
aaaacaaaggattatatcttcttgagggtatccagggaatgctgcgaagaacttaatctt
cgggcagattgtgaaatgcaggttgaacttcagtttcagttaaatcgcttacccctctgt
gaaatgcattatgccttggacaggatcaaggacaacagtattttgtttccagatgtcagc
atgactcccaccataccctggagtcccaacagacaatgggatgagcagttggaccctcga
ctaaatgctaagcagaaagaagctgttctggctatcactactccactttcaatacaactg
cctcctgttcttatcatcggtccctatgggacaggaaaaaccttcactctggctcaggca
gtcaagcacatactccaacaacaggatactaggattctcatttgcacccattctaatagt
gctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaatccccag
gcaagacctctcagggtatatttcagaaatcgctgggtaaagactgtccacccagttgtg
catcagtactgtttgatttcaagcacacattccacctttcagatgccacagaaagaagac
attcttaagcagcgagtggtagttgttactctaaatacatcacagtatctatgtcaactg
gatcttgaaccaggtttttttacacacattctgttagatgaagctgcgcaagctatggag
tgcgaaactattatgcctctagcattagctaataaaaacacaagaattgtcttggctgga
gaccatatgcagctcagtccttttgtctacagtgaatttgccagggaaagaaaccttcat
gtttcattgcttgaccggctctatgagcactaccctgcagaatttccgtgcaggatcttg
ctgtgtgagaactatcgctcccatgaagctatcatcaattatacatcagaacttttctat
gagggcaaattgatggcaagtggaaagcaaccagcacacaaagatttctaccctttgact
ttcttcacagcacgtggagaagatgtgcaagaaaaaaacagtaccgctttttacaataat
gcagaggtgtttgaagtagtagagcgtgttgaagaattaagaagaaaatggcctgttgcc
tggggcaagttggatgatggcagtataggtgtcgtaacgccttacgctgatcaagtgttc
agaattcgggctgaacttcggaaaaagagactgtctgatgtcagcgtagaaagagtgctg
aatgttcagggaaaacagttcagagttttgtttctcagcacagtacgaacacggcataca
tgcaaacataagcaaacaccgattaaaaggaaagagcagttactggaggattcaacagaa
gacttggattatggttttctgtctaattacaaacttctcaacactgccattacaagagca
caatccttggtagctgtggtgggagatcctattgctttatgttccattggaagatgcagg
aaattttgggagaggtttattgccctatgtcatgagaatgaaagcctccatggtatcaca
tttgagcagatcaaagctcagttggaagctttggagttaaagaaaacatacgtgttgaac
ccactggctcctgagttcatcccccgagctcttcggcatcaacattcggcgaatgccacc
aaacaacagcagtcaccaccaaagggcaaggtccaccatcataaccagaatgaccatttc
ccgcctgacggaatcgttcaacccaatccttctgttctaatcggaaatcctatccgagca
tatactcctccccctcctcctctgggacctcaccccaacctggggaaatctccaagtcct
gttcaaaggatagatccacacactgggacaagtattctatacgtacctgctgtctatgga
ggaaatatggtcatgtctgtgcctttgcctgtaccatggacggggtatcagggtaggttt
gcagttgaccctcgaatcattactcatcaagcagctatggcatataatatgaacctgtta
caggcacatgggcgtgggtctcctatcccttatggcctgggacaccattctccagttagc
ataggacagcagcagcagcttcagcatccagacaaggagcaacatgaacaaagtcgaaat
ggtaaaagtgaaaacactgctggacctgaaataaataaaattcgaacacctgagaagaaa
cctgtggaatccaagcaggttgacttagaagcaaattctcagaatagaagcccagagtca
cgttccagtgctggttatcctaacgctaaatttcatcgcaaagataatcttaaccccagg
cagctgaatctacatctcaccccaccccactcccagtacgcagttcccaatcgccacttc
cagcacctgtcacagataccgaggcagccatatcctctgcaacagcagcaaaacctttta
aatcaacagcaaaaccatttgcctgaacaacaaaaccaaatgccaccccagcaaagccag
gtagttcagcagcataatcatttgaatcagcagcctccacaaccttcgcagctttcccct
gcttaccaggcaggccccagccagtctttttttaataatccaattccccaccgaccgcat
tctcctgctgtagatgctgtgatttcagaacaccccccacctatgttacaagaagtcaat
aatcctttgaggcctattgcacagcacaaccctgttctgccaacccacttgaacaacttc
attgaagagaatccatcaggaatgcccttaggggacactttagatcgtatgcatggaaat
gtagctttggaaacaataaggcagcaacaacaagccaggttacagcaatggaatgaacat
aatgcctatctcagtcaaggcactattccatatcaacaccatcaccatcctcatctacca
catcttcctcagcaaccaattggattgcatcaacagcagcaagttagggcaaactggaaa
cttgccagtaatacagaagatgaaacagaggcaacatattcaagattccaggatttgctc
agagaactgtcacaccgtgatcaaagtgaaagtcgggacttagctgagatgccacccccc
cagtcaagactgttgcaatacagacaagttcagcccagaagcccaccagcactcccttct
ccttcctgcaattctaaccacagcggtcactttcctaacttcactgaaaacaacagagac
attgaaatacccagtaacccagcatttcagcagcatttaccccaaatatacaatcctcct
ttctcaatgccatctgaacatataaccccatctcccttgaaatacctgcaacctgatgga
tcatggacttacgctaacctgcagcagaatcacctgatggggcaaggctttcattatggt
atacctccattgccccataggtcgcaacaaaacccttttatacaaatacagaatcatccg
catgcggtcggtcaggagccatttcatccactcacatctcgagcagtatctgcttcttcg
ctccacagcttagaagagtatgaaccaagaggaccaggcaggccgttgtaccaaagaaga
atttcctctagttcagtccaggcttgttctgaagaattaagcactcctcaagacagtctt
ggtcagtgtaaagagcttcaggaccacaataaccagtcatctttcaactactcatcacct
gagctgtgggtaaactcctcctcatctgccccgtacccaaacattccatgcaacggagcc
aacagagcagttccaccccgggagttgttagctccaccgaagacagtcaagcccccagag
gaacacctgaaggccgaaaacatccagctgtccaactccttcaactacagcgtgctacag
catctcggccagttcccacccctcatgcccaacaagcagatcgtggagtcgaacagcagc
agccagcagaacgctggtgggagcaagcccgtcatgtcctacgcaagtgctctgcgggct
ccgccaaagcccaaacctcctcctgagcagacaaaaaagaatagcgaccctttgtctttg
tttcaggaacttagcctaggtagttcatcaggtagcaacggcttttactcctattttaaa
taa
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integrated database retrieval system
