Chlamydotis macqueenii (Macqueen's bustard): 104483671
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Entry
104483671 CDS
T08437
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like domain-containing protein 1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104483671 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmac03019
]
104483671 (PNLDC1)
Enzymes [BR:
cmac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
104483671 (PNLDC1)
Messenger RNA biogenesis [BR:
cmac03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104483671 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
104483671
NCBI-ProteinID:
XP_010123842
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MEFTGLHSTSLQNNMPSLFDSPAERYLKARRSVQRFTVTQLGLAIFSNENSNKYVVHSYN
FFLFPSTLGVTDVEFTLSASSIQFLSHYGFDYNKFLKDGIPYMNEVQEKILSQRLSAGSW
KISGTLGRDALKKAIDEVTSWIAAAEEEETMILQDLSGYQMFEVQLVLRQALKNVWTQPL
EDKKVMVKKVSPQNRWLLENSPYDCCQKEQILLSARGFTNLFQTLVEAKKPLVGHNMLMD
IMHLHEKFYKPLPESYEEFKRNIHNLFPVLIDTKTVTKSIWKQFPFPRASNLLEVYAVLC
SSKLNPKDPAWPVIALASDCSRYAEKESPHEAGYDAFLCGSVLLKSAHLLLCRSTADGVE
ADPSFPQYLTVLAEYLNKVNVIRGAVSSINFSGEDVPCQHPPLLVVQVRGWPGLNERQIY
QEFKAVCRFDVRRLSENQFILLSNKFNHVRLVLRDYKHHPHLRVSVYRHWRHSPRVNCLL
QVSGIVALWSLLAFVLGGAPSF
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggaatttactggcttgcattcaacttccctgcaaaataacatgcccagcctgtttgat
tcccccgcggagcggtacctgaaggccaggcggagcgttcagcgcttcactgttactcag
cttggactggcaatattctcaaatgaaaattcaaacaagtatgtggtgcattcatacaac
ttttttctgttcccctcgacactgggagttacggatgtcgaattcaccctctctgcatct
agcattcagttcctgtctcattatggctttgactataataagttcctcaaagatggaatc
ccatacatgaatgaggtacaggagaagatccttagccagcgtctctcagcgggtagctgg
aaaatcagtggtactctggggagggatgcgctgaagaaggctattgatgaagtgacctct
tggatagctgcagcagaggaagaggagactatgattctgcaggatctgagtggctatcag
atgtttgaagtccagctggttctgagacaggctctcaaaaatgtttggacacagcccctt
gaagacaagaaggtaatggtgaaaaaagtgagtccacagaatcgttggcttctggagaac
tctccttatgactgctgccagaaggagcaaattctcctgtccgcccggggcttcaccaac
ctcttccagacactggttgaagccaagaagcccctggtgggacacaacatgcttatggac
attatgcatcttcacgagaagttctacaagcccctcccagaaagttatgaggagtttaaa
aggaacattcacaacctgtttcctgtcctcatagacaccaagactgtaacaaaatccatc
tggaagcaattcccgtttcctcgagcatctaatcttttggaggtgtatgcggttttgtgc
agcagcaaactaaatcccaaagatccagcgtggccagtgatagctcttgcaagtgactgc
tcaagatatgctgagaaggaatcccctcacgaggcaggctatgatgcatttctctgtggt
tcagttcttctgaagtcagctcatttgctactatgcagatcgacagccgatggagtggag
gctgatccttctttccctcagtatctcaccgtgttagccgagtatctgaacaaagtgaat
gtcatccgaggtgctgtttcaagcattaatttttctggggaagatgttccctgccaacat
ccccctctcttggttgtccaagtccgaggctggccagggctgaatgaaaggcagatttac
caggagtttaaagctgtttgtcgctttgatgtcagacggctttcagagaaccagttcatt
ctgctctccaataaatttaatcacgtccggctcgttctgcgagattataagcatcatcct
cacctgcgcgtttccgtctatcgccactggaggcactctccacgcgtgaactgcctgctg
caagtctctggtattgtggcactgtggtctctcttggcctttgtactcggaggagctcct
tcattctaa
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