Chlamydotis macqueenii (Macqueen's bustard): 104483781
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Entry
104483781 CDS
T08437
Symbol
PTCH1
Name
(RefSeq) protein patched homolog 1
KO
K06225
patched 1
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
104483781 (PTCH1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
Patched
Motif
Other DBs
NCBI-GeneID:
104483781
NCBI-ProteinID:
XP_010123970
LinkDB
All DBs
Position
Unknown
AA seq
1291 aa
AA seq
DB search
MFNPQLMIQTPQEDGANVLTTEALRQHLDSALQASRVHVYMYNRQWKLEHLCYKSGELIT
EAGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLQWINFDPLEFLEELKKI
NYQVESWEEMLNKAEVGHGYMDRPCLNPADPDCPITAPNKNSTKPLDVALVLSGGCYGLS
RKYMHWQEELIIGGTVKNSSGKLVSAQALQTMFQLMTPKQMYEHFKGYEYVSHINWNEDK
AAAILEAWQRMYVEVVHQSVAQNSTQKVLSFTTTTLDDILKSFSDVSVIRVASGYLLMLA
YACLTMLRWDCAKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVG
VDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR
AFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCCFTSPCVTRVIQIEPQAYS
ENDNTCYSPPPPYSSHSFAHETQITMQSTVQLRTEYDPHTQVYYTTAEPRSEISVQPVTV
TQDNLSCQSPESTSSTRDLLSQFSESGMHCLEPPCTKWTLSSFAEKHYAPFLLRPKAKIV
VIFLFLGLLGLSLYGTTRVRDGLDLTDIVPRETREYDFIAAQFKYFSFYNMYIVTQKADY
PNVQHLLYELHRSFSNVTYVLLEEDRQLPKMWLHYFRDWLQGLQDAFDSDWETGKITYNN
YKNGSDDAVLAYKLLVQTGNRAKPIDISQLTKQRLVDADGIINPNAFYIYLTAWVSNDPV
AYAASQANIRPHRPEWVHDKADYMPETRLRIPAAEPIEYAQFPFYLNGLRETSDFVEAIE
KVRAICSNYTSLGIASYPNGYPFLFWEQYIGLRHWLLLSISVVLACTFLVCALFLLNPWT
AGIIVVVLALMTVELFGMMGLIGIKLSAVPVVILIASVGIGVEFTVHVALAFLTAIGDRN
HRAVLALEHMFAPVLDGAVSTLLGVLMLAGSEFDFIVRYFFAVLAILTILGVLNGLVLLP
VLLSFFGPYPEVSPANGRNRLPTPSPEPPPSIVRFALPPGHTNNGSDSSDSEYSSQTTVS
GISEELQQYEATQGLGAPVHQVIVEATENPVFARSTVVQPDTRHQSSPRLQSNPESSTQQ
TWRQGRQPKREAKEGLRPPPYRPRRDAFEISTEGHSGPSNRDRLCHRARSHNMRSPAFST
VGAAGPAYCQPITTVTASASVTVAVHPAVHSHSSRGGSFPSYEGYREADHGPFEDPHVPF
NVRCERRNSKVEVIELQDVECEERIPGNSSQ
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacccccagcttatgatccagactccacaggaagatggtgctaatgtactaaca
acagaagcactcagacagcaccttgactctgcactccaggccagcagagtacacgtctat
atgtacaacagacagtggaaattggaacatttgtgttacaagtcaggagaactcataaca
gaagcaggttacatggaccagatcatagaatatctttatccttgcttaattatcactcct
ttggactgcttctgggagggagcaaagctacagtcaggaactgcgtacctattagggaag
cctcctttgcagtggatcaactttgaccccttagaattcttggaagagttaaagaaaata
aactaccaagtggagagctgggaagaaatgctgaataaagcagaggttggtcatggttat
atggatcgaccctgcctgaatcctgctgatcccgattgcccaatcacagctcccaataaa
aattccaccaaacctcttgatgtagcccttgttttgagtggtggatgctatggactgtca
agaaaatacatgcattggcaggaggagttgattataggtggtacagtcaagaacagttct
ggtaaacttgtcagtgcgcaggctttgcaaaccatgtttcagttaatgactcctaagcaa
atgtatgagcacttcaaggggtatgaatatgtttcacatatcaactggaatgaggataag
gcagcagcaattctggaagcctggcagaggatgtatgttgaggttgttcatcaaagtgtt
gcacaaaactctactcagaaggtgctttcctttactacgaccaccctggatgacatccta
aagtcattttctgatgtcagtgttatcagagtagctagtggctacttactaatgcttgcc
tacgcctgtttaacaatgctgcggtgggactgtgccaagtctcagggtgccgtggggctg
gcaggagtcttgttggttgcactctcagtggctgcaggattgggcctgtgctcattgatt
ggaatttcctttaatgctgccacaactcaggttttgccttttcttgctcttggagttggt
gtagatgatgttttccttctggcacatgcatttagcgaaacagggcagaataagagaatt
ccatttgaggacagaacaggagaatgtttgaagagaacaggagcaagtgtagctcttaca
tctatcagcaatgttactgctttctttatggctgccttaatccctattcctgctttacga
gcattttcactccaagcagcagttgtggtggtattcaactttgctatggttctgctgatt
tttcctgcaatcctgagcatggacctttatcgtcgggaagacaggagactggatatattc
tgctgttttacaagtccgtgtgtcactagagtgattcagattgagcctcaagcatattcg
gaaaatgataatacttgctacagtcctccaccgccgtacagcagtcacagttttgcacat
gaaactcagattacgatgcagtctacagtgcagctgcgcacagaatacgatcctcatacg
caggtgtactacaccacagcagagcctcgctcagaaatatctgtgcagccagtgacagtg
acacaagataatcttagctgccagagcccagaaagcacaagctcgacaagggatttgctt
tcccaattttcagagtctggtatgcattgccttgagccaccctgtacaaagtggacactc
tcatcttttgcagaaaagcattatgctccattcctcctaagaccaaaagctaagattgtg
gttatttttctttttctgggtttacttgggctcagcctttacggaactacccgggtgaga
gatggactagatctcacagacattgtaccacgggaaacacgggaatatgactttattgct
gcacagttcaagtatttttcattctacaacatgtatattgtgacacaaaaagcagactat
ccaaatgttcagcacttactttatgagcttcatagaagtttcagcaatgtgacatatgtt
ctattggaagaggataggcagcttcccaaaatgtggttgcactactttcgagactggctg
caaggactgcaggatgcatttgacagcgactgggaaacagggaagatcacttacaacaat
tataaaaatggatctgatgatgctgttttggcttacaaactcttggtacaaacaggcaac
cgagcaaagcccattgacatcagccagttgactaaacagcgtctggtggatgcggatgga
atcattaacccaaatgccttctacatctacctgacggcctgggttagcaatgaccctgtg
gcctatgctgcctcccaagccaacatccggcctcaccgaccagagtgggtccacgacaaa
gcggactatatgccagaaacaaggctgagaattccagcagctgagcccatagaatacgct
cagtttcctttctacctcaatggattgcgtgaaacttctgactttgtggaggctatcgag
aaagtgagagctatctgtagtaactacaccagcctggggatcgctagctacccaaacggt
tacccatttctgttttgggagcagtacattgggcttcgtcactggctcctcttatccatt
agtgtggttttggcttgcacgtttctggtgtgtgccctcttcctcctaaacccctggacg
gctgggatcattgtggtggtgctggctctgatgactgtggagctgtttggcatgatgggt
ctaattggaataaagctgagtgcagttcctgtggttatcctgattgcttctgttggcatt
ggcgtggaattcactgttcatgttgctctggcgtttttaactgccataggagataggaac
catagggctgtccttgcattggaacacatgtttgcgccagtgctggatggggccgtgtcc
actctacttggagtgttaatgcttgcaggatcggagtttgattttattgtcaggtatttc
tttgctgttttggcaatcttaaccattctgggagttctcaatggattggtgctgcttcct
gttcttctttcattctttggaccataccctgaggtttctccagccaatggacgaaacaga
ttgcccacaccatctcctgagccgccccccagcatcgtgaggtttgcattgccacccggg
cacacaaataatgggtcagattcctctgattcagagtacagctctcaaaccacagtgtct
ggcattagtgaagagcttcagcagtatgaagccacccaaggccttggggcaccagtccat
caagtaatagtggaggccactgagaatcctgtctttgcgagatccactgtggttcagcca
gatacaaggcatcagtcaagtcccagattacaatcaaatccagagtccagcacgcagcag
acatggcgtcagggcagacaaccgaaacgggaagcaaaggaagggctgcgaccacctcct
taccgccctcgcagggacgcttttgaaatttctactgaagggcattcaggacctagcaat
agggatcgcttgtgccacagggctcgttctcataacatgagaagcccagcgttcagcact
gtgggcgctgcaggaccagcgtactgccagcctatcactactgtgactgcctcagcttca
gtgactgttgctgtccaccctgcggtgcacagccacagctctcggggagggagctttcca
tcctatgagggataccgtgaagctgaccatgggccatttgaggaccctcatgtgcctttt
aatgtgcggtgtgaaagaagaaattctaaagtagaagttatagaactacaagatgttgaa
tgtgaggaaaggatacctggcaacagctcacagtaa
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