Chlamydotis macqueenii (Macqueen's bustard): 104484097
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Entry
104484097 CDS
T08437
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
VWA
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
VWA_2
CBM_4_9
DUF4998
Motif
Other DBs
NCBI-GeneID:
104484097
NCBI-ProteinID:
XP_010124369
LinkDB
All DBs
Position
Unknown
AA seq
1074 aa
AA seq
DB search
MLIHTCFFFACLPVVSHVWGRVGQGSGRLKLTVLSEDRLQMKWKETEGTINGYKVRVKPM
AGDSEQEVMLKTKTPKATVGGLSPTKEYTLQVYVLNGSQEALFAKRKFVIEDLKNASQTR
NNRRNSGAASGKNLTSSGSSAAEHSGVAEATPPPLNAVLTQPVKDRAEKKKQKGTHPKGL
GETTRNQPSAEASVTEATPTTTRSSPHTPANSEREPLGKEKLSKDSLRRGSQFQCDTSAM
TDIVLLVDGSWSIGRNNFKLIKEFLSNLISPFSIAQDKIRVGLSQYSSDPRTEWDLSTYS
TRDQVLEAMRNLRYKGGNTFTGLALTHVLEQNLKPDAGARLEAEKLVVLLTDGKSQDDAN
LAAQTLKNLGIEIFAIGVKNADEAELKQVASEPLELTVYNVLDFPLLSNLVGRLTRVLCT
RIKEKSNKEKAGSTVKDLPVNTGPQLSPTDLKISAVTSKSMHLTWSPPPRPPKKYRVVYY
PSKGGSTKEVVLDGEISSLRLSNLTSHTEYLVSVFPVYDMFVGDGLRGITSTLPLSSPRS
LRVSELTHNSIRLSWKAAQGATQYLVLCSAAPDGAEDYTKEVKVAQPEVLLAGLSPSTEY
SVAVYAMYGEDASDPASIQETTLALSPPRYLSFSELSHASVRVSWEAASPAVKAHRVAYV
SSRGSNAGEVEVPGTATSTVLRPLSSLTQYFISVRSTYEEGDSFPITGNVTTLKVPPPRA
LKVTELSGNSLRLQWEAVAASDVVVYQIKWSTAGGGNPQELSIAGNVATAVLPGLQKNTD
YKISIWAYYKDGARSDTVSIQHRTNSRSPPTNLFIDSETPTSLQVHWTPPDGRIQHYKIT
YNPVSDAGAQQTIMAPGKSNSVTLQSLLPDRAYKVIVSAIHYTGESEVTSTTGRTAPVLS
KFPSIRGYIPSKTEACPTISSTKGSVRGFDMMEAFGLVEKEYASIKGVAMEPFIFSGSRT
FTLFRDIQLTQRTSDIHLFAIPPEHTISILLRLLPDTPKEPFAVWQITDEDFQPLLGVNL
DPSKKSLTYFNHDYKADLQEVSFDQQEVKKIFYGSFHKVLIKRERNVAHDLTPV
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgctgattcacacttgtttcttttttgcctgccttcctgtggtgagccacgtctgggga
cgcgtgggccaagggtcaggccggctgaaactcacggtcctttcggaagacaggctccag
atgaaatggaaagagaccgaagggaccatcaacggctacaaagttcgggtaaagcccatg
gcaggggactcagagcaagaagtcatgctgaaaaccaagactcccaaagccacagtgggg
gggctgagccctaccaaggaatacacgctgcaggtctacgtgctcaacggctcccaggaa
gccttgttcgccaagaggaaattcgtgatagaggacctaaaaaatgcatcccagactaga
aataaccgcagaaattcaggagctgcgtcaggaaagaatctcacctcttcggggagctca
gcagctgagcacagtggggtggcagaggccaccccaccgcccctgaacgccgtcttgaca
cagccagtaaaggacagagctgagaagaaaaagcagaaggggactcatccaaagggctta
ggagaaaccacaaggaaccagcccagtgcagaggccagtgtgacagaagcaacaccaaca
accacaagatcatccccacacactccggcaaactcagagcgagagcctctagggaaagaa
aaactcagcaaggattcattgaggcgaggctcccagtttcagtgtgacacatctgcaatg
actgatatcgtcctgcttgtggatggatcttggagcatcggacgcaacaatttcaagctc
attaaggagtttctgagcaatttgatttccccattcagtattgcccaagacaagataaga
gtagggctgtcccagtacagcagcgatccccgcacagagtgggatctgagcacttactct
acgagggaccaggtgctggaggccatgaggaatctgcggtacaagggcggcaacaccttc
acaggtctggcgctgacccacgtcctggagcagaatttgaaacctgacgctggtgcccgg
ctggaggctgagaaattggtagtcctcctgactgatggaaaatcccaggatgatgccaac
ctggctgctcagacgttgaaaaacctgggtatagagatatttgccattggggtgaagaat
gcggatgaggcagagctgaagcaggtggcctcagagccgctggagctcacggtgtacaac
gtgctggatttcccactgctgagcaatctggttggcaggctcacccgggtcctgtgcacc
aggatcaaagagaagagcaacaaggaaaaagcaggcagtactgtgaaagatctccctgtg
aacacgggtccccagctgagcccaactgaccttaaaatatcggctgtgacctcaaagagc
atgcacttgacctggagccctcctccgaggccaccaaaaaaatatcgagttgtctattat
ccatctaagggtggtagcaccaaagaggtggttttagatggagagatctcgtctttgcgg
ctttccaatctgacctcgcacacggagtatctggtgtcggtgtttcctgtttacgacatg
tttgttggggatgggctgagaggcatcacctccacattgcctttgtcttccccacgctcc
ctgcgcgtctcggagctgacccacaacagtatcaggctgagctggaaggcagcccaggga
gccacgcagtacctggtgctctgctccgcagcccccgacggagcggaggactacacgaag
gaggtgaaggtggcccagcctgaggtgctgctggcagggctgtcccccagcacagagtac
tcggtcgcggtgtatgcgatgtatggggaggatgcgagtgacccggccagcatccaggaa
accaccctggccttgagtcctcccagatacctaagcttctccgagctcagccacgcgtcc
gtccgagtcagctgggaggccgcctctccggccgtgaaagctcaccgcgtcgcctatgtt
tctagtagagggagcaacgctggggaggtagaggttcctggcacggcaacatccactgtc
ctgagacctttgtcctccctcacccaatacttcatcagcgtccgatccacgtacgaagaa
ggggactcctttccaattactggcaatgttaccaccttaaaggtccccccgccgcgtgcg
ctgaaggtcaccgagctctcggggaacagcctccgactgcagtgggaagctgtcgctgcc
tccgatgtggttgtctaccagatcaaatggagcacagctggtggagggaaccctcaggag
ctctccattgctggaaacgtggcaaccgctgtcctgccaggcctgcagaagaacaccgac
tataaaatatccatctgggcctattacaaagatggtgctcgaagtgacacggtttccatc
cagcacaggaccaattcccggagcccgcccaccaacctcttcatcgactccgagaccccc
accagcctccaggtccactggacccctcccgacggccgcatacagcactacaaaatcacc
tacaaccctgtttctgatgctggtgctcagcaaacaatcatggctccgggcaaaagcaac
agtgtgaccctgcagtcgctgctgcctgatcgagcctacaaggtgatcgtttctgccatc
cactacacaggagagagcgaggtcacgtccacaacaggacggacggctcctgtgttgtct
aaattcccttcgatacgaggatacattccatctaaaacagaggcgtgccccaccatcagc
tccaccaagggctccgtacgaggatttgatatgatggaagcttttggcttagtagagaag
gagtacgcctccatcaagggcgtggctatggagccattcatattcagcggctcccgtacc
ttcaccctcttcagagacattcagctcacccagaggaccagtgacatccacctctttgcc
atcccgcccgagcacaccatcagcatcctcctgcgcctcctgcccgacacccccaaggag
cccttcgctgtgtggcaaataacagatgaggacttccagcctctccttggtgtcaacctt
gaccccagtaagaaatccttgacctatttcaaccacgactacaaggctgatttacaggaa
gtctcctttgaccagcaggaagtgaagaagatattctacgggagctttcacaaggtcctt
atcaagagagagagaaacgtggctcacgatctcactccagtctga
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