Chlamydotis macqueenii (Macqueen's bustard): 104484148
Help
Entry
104484148 CDS
T08437
Symbol
VPS13C
Name
(RefSeq) vacuolar protein sorting-associated protein 13C
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmac04131
]
104484148 (VPS13C)
Membrane trafficking [BR:
cmac04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
104484148 (VPS13C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_M
VPS13_N
VPS13_VAB
VPS13_C
WWE
Motif
Other DBs
NCBI-GeneID:
104484148
NCBI-ProteinID:
XP_010124448
LinkDB
All DBs
Position
Unknown
AA seq
3186 aa
AA seq
DB search
TIRSGQKLLKKKTTEAEKKSGGWFSGFWGKRESRKKEDEESPVPETIDELMTPEEKAKLF
TAIGYSDSCHHLSLPKQYVAHVVTLKLLSTSLTIKEDKNVAETLKVQIIDLSTKISQRPG
AQAIKVEAKLENWYVTGLRQENVVPSLVASIGDSKSSLLKIEFNINPEDSTADQSLTIES
QPVEIKYDARTINAMVEFFETSKGIDLERLTSATLMKLEEIKERTATGLVHIIEMRKVLD
LKINLKPSYLVVPQTGFYHEKSDLLILDFGTFQLNSINQGSSQAPSFSSLEEIMDKAYDK
FDVEIKNVQLLFGRTGEDWKKARFQHPSTLHVLQPMDIHVQLAKSMVERDTRMPKFKVSG
GLPLVHVRLSDQKIKAIFDLIDSIPLPQKSSVSMPSTKVPAIPTIPVVSKGLLNTPQLFA
EIASDSEEEYFDFEESSQPTDRSLIKGEEIRNKEAAEEELTDLQLKFEIKEVLVELTRQK
KTEETVLVFDIMHLGTEATVRTYNLAAVSYLKKISLDYYGIEGKNAPIHLISSSDKPGLD
LLKVEYVKADRNGPHFQTIFDNAEQMIQVAFSSLNLQLHTEALMSAVSFLTAVSPSGRGS
RGDIPTKDDKQEDDTKLKKVARPSKDKDVFEFKLFAKLDAFCLNICDEKKNIADIKIQGL
DSSLLLQPSHIVFFARLKDIVVTDVDSRTLHKKAVSIVGDEVFSFNLTLDPYATEGEAYT
DMSQVDGTVSLKVGCIQIVYLHKFLMSLLTFLNNFQTAKEALSAATVQAAEKAATSVKDL
AQRSFRLAMDIHLKAPVIVIPQSSVSSNAIVIDLGLIKVQNQFSMVSPAGSSLPPVIDEM
DVQLTKLKLSRTTVETGLSHPDIQILHPINLSLSVKRNLSAAWFHKLPMLEITGYLDTMN
VVLSHEDLNVFLKVLTENLGEAEEKQTQAKSVLQKEGKTKEMEKSILTQDKNVXXXXXXX
XXXXGMLTEKRKATLNEDAINMLLNFEIKEVVVTLMKQVQKERYPLHILTVLQLGTETKI
RNHELTAAAYLKKIIVRCTEINDSKGDPLCIVNSSSETDEHLLKMEYIKADADGPDFVTT
YRSTKQNINVIFSCLDIVLHTEALLSIMSFLTFSVPSGGLPSTDKASDHKPQIKEQEKGS
TPRTVSSDAAQDDVCELKLTAKLNAFNVTVCDQTCGIADIRIQGMDASVAMKTKKIKVFS
RLEDIVITNVDPKTIHKKAVSIVGDEVFRFHMSLYPDATAGEAYTDMSRVDGKMSLRVGC
IQIIYLHKFFMSLLNFLNNFQTAQETLAAVTVQAAEMAASSMKDFAKKSFRLLMDVNLKA
PVIVVPESSTSHNALVADLGLIRVQNEFKLVSSGESSLPPVIDNMDVQLTHLKLSRCIID
RDSQPDSEILCPVSLTLLVQRNLAATWYHKTPTIGIKGDLKPMQIALSEDDLAVVMKILL
ENLGGASSQPNTVQQNIEDMRILRKGEVPDESDLREDPLAFGQKSVSTVQSSAECYTTLT
FDFNFESLSVTLYNSDVNQKSLLSLHSDKLRLGELRLHLMASSGKMFSDGSMDINVKLKA
CTLDDLREGIQNVTARMIDKKDNTNDSSMIDISYKQDKNGTKVVAVLDKLYICASMEFLL
TVADFFINSMPTSSTARSAQFQLKHAGSGKSKPETEMSVWPNMTVKAVIMDPEIVFVANL
TNADAPALKVSFQCDFALTSGKLAQRMTAQVKSFKVLACAFLKEKQDKSVTTVLQPCSLV
MENMIHVSGLQTVVVTIEELTIKISPIILNTVVTIMAAIKPKTTEEDSKGATEVPENLWQ
VKPVDQCSAWFLGVDIATEATETFKDREHVLKQEKFDIEVKSVQVTLECGLGHRTVPLLL
VESVFSGVLKNWSSLMEVTADMSLEVHYYNETYAVWEPLIERVEGGKKQWSLKLEMKTNP
VQERSLMPGDDFIVLPEPQTAVNISSKDTMNITISKCSLAVFSNLAKAFSEGTASTFDYS
FKETAPFIVKNALGVPFRVHPSSNFRIVGSVKKESTNNVEIGQNMELEYSAFEVPQRGRL
SALYRQESSVFSLNLEIQGYKEVVNIPIAKPGRRLYNIRNLLAGHSDSIVVQIDATEGNK
VITVRSPLQIKNHFSIPFVIYKLARDSMLLEPIGISKPEEEFHVPLHSYRCHLYVRPTGV
LEGQFKESTTYVAWREELHRSNEVKCLLQCPATETNFLPLIVSSTAVPDELNFISTYGEE
WDPAYIIHLHPVLTVRNLLPYSLRYLLEGTAEARELMEGSAADVFHSRINGEIMELVLLK
YQGKDWNGHLKIHDGMPEFFSVCFASHSATVVTVDIYIHTRRIGSRMILSVFSPYWIINK
TSRILQYRAEDTHVKHPADYRDIVLFSFKKKNIFSNNKIQLCISTSTWSSSFSLDTVGSY
GCVRCSASNMDYLVGVSIKMSSFNLTRIVTFTPFYTIANKSSLELEVGEIGPNGSFPTNK
WNYISASECLPFWPEDSSGELCVRVVGCESSSKPFLFKAQDNGTLLRLEELNGGLLVDVN
VSEHSTVISFSDYHEGAAPALIVNHTSWDSLRYKQSGLQEEMELKPKQVCLFAWTDPTKT
RKLTWGYSQNFGEHDLLKDECGQFPYNANTQIHWVSFLDGRQRVLLFTDDVAIVSKARQA
EELEQPDQEINLSIHSLGLSLVNNENKKEISYIGITSSGVVWELKRKQKWKPFSQKQINL
LEQAYQKYLSKSAFQTTGWHKLDSNTEVNFSKVPMEMRLPVRCSIRRNFLSGIQVEFKQS
PHQRSLRAQLYWLQVDNQLPGSMFPVVFHPVAPPKSIALDSEPKPFIDISIITRFNEYSK
VLQFKYFMVLIQEMALKIDQGFLGALSELFTPSTDPEAERQRFKLIQQDVDALNTELMES
SLTDLSMLSFFEHFHISPIKLHLSLSLASGGEASDNGGEMIAIHSLNLLLKSIGATLTDV
DDLIFKLAFFEIKYQFYKRDQLMKRVVRHYSEQLLKQMYVLVLGLDVLGNPFGLIRGLSE
GVEAFFYEPFQGAVQGPEEFAEGFVIGVKSLLGHTVGGAAGVVSRITGSVGKGLAAITMD
KEFQQKRREEMGRQPKDFGDSLAKGGKGLLRGVVGGVTGVFTKPVEGAKKEGAAGFFKGI
GKGLVGALARPTGGIVDMASSTFQGIQRVAESTEEVSNLRPPRFIHEDGIIRPYDRVEAE
GYDLFE
NT seq
9558 nt
NT seq
+upstream
nt +downstream
nt
acaataagatcaggacaaaaactactcaagaagaaaaccactgaagcagaaaaaaaaagt
ggaggatggtttagtggcttctggggtaaaagagaatctaggaaaaaggaagatgaagaa
tcacctgttcctgaaactattgatgaactaatgacaccagaagagaaagctaagcttttt
actgctattgggtatagcgacagctgccatcacctttccttaccaaagcagtatgttgcc
catgttgtgacactgaagctgttaagcacttctcttacaattaaagaagacaagaatgtg
gcagaaactcttaaagtacagataattgatctgagtaccaaaatatcacagcgcccagga
gcacaagccattaaggttgaagcaaagcttgaaaactggtatgttacgggcctgagacaa
gaaaacgttgtaccatctcttgtggcttccataggggatagcaagtcttctctacttaag
atagagttcaatattaacccagaggatagtactgctgaccagagtcttactattgaatca
cagcctgtggaaataaaatatgatgcaagaacaataaatgcaatggtagaattctttgaa
acaagtaaggggatagatcttgaacgattaacatcagccacgttaatgaagctggaagaa
ataaaggaaagaactgctacagggttagttcatattattgaaatgcggaaagtcctcgac
ttgaagatcaatctgaaaccttcctaccttgtggttccacagacaggtttctaccatgaa
aaatcagatttgctgattttggactttggtacatttcagcttaacagcataaatcaaggc
agtagtcaagctcctagtttttcatctttagaggagattatggacaaagcttatgacaag
tttgatgtggaaataaaaaatgtgcaacttctttttggaagaacaggtgaagactggaag
aaggctcgttttcaacatccatcaactttgcacgtactacagcctatggatattcacgta
cagttggcaaaatcaatggtggaaagagataccaggatgccaaagtttaaagtgtcagga
ggacttcctttggtacatgtcagactctcagaccagaaaatcaaggccatttttgatctg
attgatagcattccattgcctcagaagtcatctgtgtcaatgccaagcacaaaggttcca
gctattcccacaattcctgttgttagtaaagggttgcttaatacaccccagttgtttgca
gaaatagcgtcagactctgaagaagaatattttgattttgaggaaagttctcaaccaact
gacaggtcgctaattaaaggggaagaaataagaaataaggaggctgctgaagaggaactg
acagatcttcagctgaagtttgaaattaaagaggttttagtagaactcaccaggcaaaag
aaaactgaggaaacggtacttgtgtttgatataatgcatcttgggacagaagcaactgtt
agaacctataatttggcagctgtatcttatttaaagaaaataagcttggattactatgga
attgaaggtaaaaacgcacccattcatctaattagttcctcagataaacctggcttagac
cttctgaaggtggaatatgtcaaggctgacagaaatgggccgcactttcagaccattttt
gacaacgctgagcagatgattcaagtagctttttcatcattgaaccttcagctgcataca
gaggcccttatgtctgctgtcagttttctaacagctgttagtccatcaggcagaggaagt
cgtggagacataccaactaaagatgacaagcaagaagatgacactaaattgaagaaagtg
gctagaccttccaaggataaggatgtctttgaattcaagctttttgccaagctggatgcc
ttctgtttaaatatttgtgatgaaaaaaagaacattgcagacatcaagatacaaggtctt
gactcatcccttctccttcagccaagtcacattgtattctttgcccgacttaaagacata
gttgtcacagacgttgattcaaggacccttcataaaaaagctgtgtctatagtaggagat
gaagttttcagtttcaatctgaccttagatccatatgctactgagggagaagcatatact
gacatgtcgcaagtggatggtactgtatctttgaaagtaggctgtattcagatagtatat
cttcacaaatttctcatgtctcttctgaccttcttgaacaactttcagacagctaaggag
gcactgagtgctgctacagtccaagctgcagaaaaggctgctaccagtgtaaaagatctg
gctcaaaggagttttcgacttgcaatggacattcacttgaaagcaccagttatagtcatt
cctcagtcctcagtttcctccaatgctatagtaatagatcttggcttgattaaggttcag
aaccagtttagcatggtgtctccagcaggcagttcgctccctccagtcattgatgaaatg
gatgtgcagctgacaaagctgaagctgtctaggaccactgtggagacaggtttgtcgcat
ccagacattcagatacttcaccctattaatttaagcctgtctgtgaaacggaatctgtct
gcagcttggtttcacaaattaccaatgttggagatcacagggtatctggatacaatgaat
gttgtgttaagtcacgaggatttgaatgtttttctcaaagtgttgacagaaaaccttggt
gaagcagaagaaaaacagactcaggcaaaatcagtgctgcaaaaggaaggtaaaacgaaa
gaaatggagaaatcaattttgacacaggataagaatgtacnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnaggaatgctgactgaaaagagaaaagcaacattaaatgaagacgcaatc
aatatgttacttaattttgaaatcaaagaggttgtagtaaccttgatgaagcaggttcag
aaggagagatacccattacatattctaactgtgctacagcttggaaccgaaactaaaatt
agaaatcatgaattgactgcggcagcatatctgaaaaaaattattgtgagatgcactgaa
ataaatgactcaaaaggagatcctctttgcattgttaattcttcaagtgagacagatgaa
catcttctgaaaatggaatacattaaggctgatgctgatggaccagattttgttactact
tacagaagcaccaagcaaaacatcaatgtcatcttctcatgtttggatatagtacttcac
acagaggctttgctttccatcatgagttttctcacattcagtgttccatcaggtggtctt
cccagtactgataaagcatcagaccacaagcctcaaataaaagagcaagaaaaaggaagt
actcctagaacagtgtctagtgatgcagcccaggatgatgtctgtgaattaaaacttact
gcaaagctaaatgcgttcaatgtcacagtgtgtgatcagacctgtggaattgcagacatt
agaatacaaggaatggatgcatctgtagctatgaaaacgaaaaagattaaagtgttctcc
agacttgaggacattgtaattacaaatgttgatccaaaaacaatccataaaaaggctgtc
tccatagtgggagatgaagtgttcagatttcacatgtcactttatccagatgctactgca
ggggaagcctacacggatatgtcaagggtggatggtaaaatgtctctgagagtgggctgc
atccagataatttacctacataaattctttatgtctctcttgaacttcctaaacaacttc
caaacggcacaagaaaccctggctgcagtcactgtccaggcagcagaaatggctgcttcc
agcatgaaggactttgctaagaagagcttccgtctcttaatggatgtcaacttgaaagct
ccagttatagttgtccctgaatcttcaacgtcacataatgctttggtagctgatcttggc
ttaatcagagttcagaatgaattcaagctggtgtcttcaggtgaatcttctcttcctcca
gtcattgacaacatggacgtgcagctaactcatttgaaattatcaaggtgcattatagac
agagattctcaaccagattctgaaattctgtgtcctgtgagtttgactttactggtccag
agaaatttagcagcaacttggtatcataaaaccccaacaattggtatcaaaggagaccta
aaaccaatgcagattgcactcagtgaagatgatctagctgttgtcatgaaaattttactt
gaaaaccttggaggggcttcttcccagccgaatactgtgcaacagaacattgaagatatg
cggatacttagaaaaggggaagttccagatgaatctgatttacgtgaggatcctcttgct
tttggacaaaaaagtgtttctacagttcagtcttctgcggaatgttacacaacgcttaca
tttgactttaattttgagtcactttcagtaactctctacaatagtgatgtgaatcagaag
tctctgctttcgctgcatagtgacaaattacgccttggtgaacttcggctgcatctcatg
gcgtcatcggggaagatgttttcagatggctcaatggatattaacgttaaactcaaggca
tgtaccctggatgatctcagagaaggaattcagaatgtgactgcaagaatgatagacaag
aaagacaacacaaatgacagttctatgatagatataagttacaagcaggataaaaatgga
accaaagttgttgctgtccttgacaagctgtacatatgtgccagtatggagttcttgttg
acagtagcagattttttcattaactcaatgccgacatcatcaactgcaagatctgcacag
ttccaattaaagcatgccggttctgggaaatccaagccagaaacagaaatgtctgtatgg
ccaaatatgacagtaaaagctgtgatcatggatccagagattgtatttgttgctaatttg
accaatgctgatgcccctgccttaaaagtttccttccaatgtgactttgctctgacatct
ggaaagcttgcacaaaggatgaccgctcaagtgaagagcttcaaagtgttggcctgtgcc
tttctcaaagagaaacaagacaagagtgttactacagtgttgcagccatgttctttggtc
atggaaaatatgattcacgtctcagggttacaaactgtggtagtaacaatagaagaactt
actataaagatctccccaataattctgaatactgtggtgaccattatggctgccataaaa
cccaaaacaactgaggaagattctaaaggagcaactgaagttcctgagaacttgtggcaa
gtgaagcccgtagatcagtgcagtgcttggtttcttggtgttgatatagccacagaagca
acagaaacttttaaggaccgtgaacatgttctaaaacaagagaaatttgacattgaagtg
aaatcagttcaagtcaccttggaatgtggtctgggacatcgtactgtccctttattgtta
gtagaatctgtgttttctggtgtccttaaaaattggtcctcactgatggaggtcactgct
gacatgtcactggaggttcattattacaatgaaacctatgcagtgtgggagccgcttatt
gaacgagttgaaggaggaaagaagcagtggagtttaaagctggaaatgaagactaaccct
gtccaagagagaagtttgatgcctggggatgatttcattgttcttcctgagccacaaact
gcggttaacatctcttcgaaggatacaatgaatataacaatatccaaatgctctcttgct
gttttcagtaatttagcgaaggcattttcagaagggactgcatccacatttgactattcc
tttaaagagacagcacccttcatagtgaaaaatgccctaggtgttcctttcagagtgcat
cctagctccaattttcggatagttggttcagttaaaaaagaaagcacgaacaacgtagaa
attggtcagaacatggaactggaatactctgcttttgaagtgccccaacgaggaaggttg
tctgcactgtaccgacaagaaagctccgtcttctctttaaatttagaaattcaaggatat
aaagaagtggtaaacattcctatagccaaaccaggtcgacgactgtacaacataagaaac
cttctagctggtcattcagactcgatcgttgtacagatagatgctacagaaggaaataag
gttattaccgtacgatctcctctgcagatcaagaaccatttctcaatcccgtttgtaatc
tataaactggcaagagactccatgttgctggagccaattggcatatccaagccagaagag
gaatttcatgttcctttacattcatacaggtgtcatctgtatgttcgacccacgggagta
ttagagggtcagtttaaagagtccacgacttatgttgcctggagagaagagctacacagg
agcaatgaagtaaagtgcttattacagtgcccagccactgaaacaaatttcttgcctcta
atagtcagctcaacagctgtacctgatgaactaaattttatttcaacgtatggagaggag
tgggatcctgcctacattatccacctgcaccctgtactgactgtgaggaatcttttacca
tactccttgagatatttactggagggaacagcagaagcccgtgaattgatggaagggagt
gctgcagatgtttttcattcaagaatcaatggagagataatggagcttgtgttattaaaa
tatcaaggcaaagactggaatgggcatcttaaaattcatgatgggatgcctgagtttttt
tccgtgtgtttcgcatcccattctgcgacagtggtgacagtggatatttacatacacact
aggcgaattggaagccgtatgatcttgtctgtgttcagtccttattggataatcaacaag
acttcccgtattctccagtatcgagctgaagacactcatgtgaagcatccagcagactac
agagatattgttttgttctcctttaagaagaaaaatatttttagtaacaataagatccag
ctatgtatttcaacgagcacttggtccagtagcttttcccttgatactgtaggaagctat
ggatgtgtcaggtgttcagctagtaacatggactatctggttggagttagcatcaaaatg
agcagttttaaccttaccaggatagttaccttcactccgttctacacaatagcaaacaaa
tcttctctggaactagaagttggggaaattggtcctaatggctcttttccaactaataaa
tggaattatatctctgcttcagagtgtcttccattttggcctgaagactcatctggtgaa
ctttgtgtaagagtagttggctgtgaaagttcatccaaaccattcctatttaaagcccag
gataatggtactctgttgaggctggaagaattgaatggaggcttactcgtagatgtgaat
gtttctgagcactctaccgtcataagcttctctgattaccatgagggagctgctccagct
cttattgttaaccatacttcatgggactctctcagatacaagcagagtggattacaagag
gaaatggagctgaaaccaaagcaagtgtgcctgtttgcatggacagatccaactaaaaca
agaaaattaacttggggctactcccaaaattttggtgaacatgacctacttaaggatgaa
tgtgggcagttcccttacaatgcaaacactcagatccactgggtgtccttcctggatgga
cgccagcgagtgctgcttttcacagatgatgttgcgatagtttctaaagcacgacaagca
gaggagctggagcaacctgatcaagaaataaacttgtcaatccatagtcttggactttct
cttgttaacaatgaaaataagaaagaaatctcttatataggaattactagttctggtgtt
gtttgggaactgaaacggaagcaaaagtggaaaccatttagtcaaaagcaaataaacctg
ttggaacaagcctatcaaaagtatctttctaagagtgctttccaaactacaggttggcat
aaactagacagcaacactgaggtgaattttagtaaggtgccaatggaaatgcgtctgcca
gtcagatgcagcatccgacgcaacttcctatcaggaattcaggttgaattcaaacagtca
cctcaccaaagaagcttgcgggctcaattgtattggctgcaggttgataatcaattacca
ggatcgatgtttcctgttgtatttcaccctgtagcccctcccaagtcaattgctttggat
tcagaaccaaaacccttcattgacatcagcatcatcactagattcaatgagtacagcaaa
gtactgcaattcaaatacttcatggttcttatccaggaaatggcattgaaaattgatcaa
ggatttttaggagcactcagtgagctttttactccgtctacagacccagaagctgaaaga
caaaggtttaaattaattcagcaagatgtggatgcgcttaacactgagctaatggagtct
tccctaacggacctgtcaatgctcagcttcttcgaacatttccatatttctccaattaag
ttgcatttgagtctgtctctggcttctggtggagaagcatcagataacgggggagaaatg
atagccatccattctctgaatttgctgttgaaaagtattggagctactctaacagatgtg
gatgatcttattttcaaacttgctttctttgaaattaaatatcagttctacaagagagac
cagctgatgaagagagttgttagacattacagtgaacaactcctgaaacagatgtatgtt
ctagtactcgggttagatgttcttggaaatccgtttggtttaatcagaggcttgtctgag
ggagttgaagctttcttctacgagccattccagggtgctgttcaaggacctgaagaattt
gctgaaggctttgtaattggtgttaaaagtcttcttggacacacagtgggtggtgcagca
ggggtggtatctaggatcactggttctgttggaaaaggcttggctgctattactatggat
aaagaatttcagcagaaacggagagaggaaatgggtcggcagccaaaagactttggtgac
agcctggccaaaggaggaaaaggcttgttacggggtgttgttggcggtgtgacaggcgtg
ttcactaaacctgtagaaggggctaaaaaagaaggagcagctgggttctttaaaggaatt
ggaaaggggcttgtaggagcgttagcccgcccgacgggtggcatcgtagatatggcgagc
agtaccttccaggggattcaaagggtggcagaatcaactgaagaggtatcgaatctccgt
cctccacgtttcattcacgaagacggcatcatccggccatatgatagggtggaagctgag
ggttatgatttatttgag
DBGET
integrated database retrieval system
