Chlamydotis macqueenii (Macqueen's bustard): 104485646
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Entry
104485646 CDS
T08437
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104485646 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmac03400
]
104485646 (MSH6)
DNA repair and recombination proteins [BR:
cmac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104485646 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
PWWP
MutS_II
Autoind_bind
Motif
Other DBs
NCBI-GeneID:
104485646
NCBI-ProteinID:
XP_010126363
LinkDB
All DBs
Position
Unknown
AA seq
1264 aa
AA seq
DB search
MEGYPWWPCLIYNHPTESTIVRGKGKSARIHVQFFDDSPTRGWVSIKYLRPYKGSSDGEA
LKGGMFYSTKPEIKRAMVLADDAMSKDKTKRLELAVCREPSDTEEEEEEEEMEQMNESAS
GNSDDCNSEEDVKSNKRLTSRESAIKAKRRRVLDSDSDHDGSDVEFKPDMKETGSSEEAS
SGVDEDESSDTETDAESVPESPIKVPSKRKRRERSKPAKRSSLENERSETPKRAVAVSSE
AKSKLTSFAAPESFESQANPCSGGISGFAVWEHEKLDWLQEGKKKDAHRKRQGDPDYDPC
TLYVPEDYLNKCTPGMRRWWQLKSQNFDAVICYKVGKFYELYHMDAVIGVNELGLIFMKG
TWAHSGFPETAFGRFSDVLVQKGYKIARVEQTETPEMMETRCKSMAHPTKFDKVVRREIC
RIITKGTQTYSILDCDPSENHNKYLLCVKEKEDSSGQRVYGVCFVDTSVGKFYVGQFSDD
RHCSRFRTLVAHYTPVQVLYEKGNLSVDTQKILKGSLVSCIQEGLISGSQFWNASKTLKV
LLEEGYFKENQNSENGCSLPSVIKSLTSESDSLGLTPGEDSELALSALGGCVFYLKKCLI
DQELLSLGNFEEYVPVDIDTAKTVSSSSFFGKTDQRMVLDGVTLMNLEVLQNGTNGTTEG
TLLERIDSCCTPFGKRLLKQWLCAPLCNPKSINDRLDAVEDLLAVPDKVSEVSEHLKKLP
DLERLLSKIHSIGSPLKSQNHPDSRAIFYEEIKYSKKKIADFLSTLEGFKVMNEIVDVME
EIASDFKSKILKQLVTRKAKNPDGRFPDLSAELKRWDTAFDHNQARKTGVITPKAGFDPD
YDKALQDIKAVEEDLHKYLDKQRKLLGFKSMLYWGAGKNRYQMEIPESVISRNLPEEYEL
KSTRKGYKRYWTKEIEKMLAAMVNAEERRDAALKDCMRRLFYNFDKNSKDWQTAVECIAV
LDVLMSLANYSQDGDGPLCRPVILLPVDSAPPFLELKNSRHPCITKTFFGDDFIPNDIVI
GSKDEDSSSEASCVLVTGPNMGGKSTLMRQAGLLVIMAQLGCYVPAEACRLTPIDRVFTR
LGASDRIMSGESTFFVELSETSSILQHATQHSLVLVDELGRGTATFDGTAIASAVVKELA
EKIQCRTLFSTHYHSLVEDHSHNVAVRLGHMACMVENESEDPSQETITFLYKFIEGACPK
SYGFNAARLANIPEEVIQKGHRKAKEFEKMTISLRVFRYLCLVVDGATSDANAVQKLTAM
IKHL
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggaaggttatccttggtggccgtgtctcatatacaaccatccaactgaaagtacaata
gtcagaggaaaagggaaatccgctcgcatccacgtacagttttttgatgacagccctaca
aggggctgggtcagtattaaatatctgaggccctataaaggttcatcagatggggaggca
ctgaagggaggtatgttttatagtacaaagcctgaaattaaaagagcaatggtgctagcg
gatgatgcaatgagtaaagataaaactaagcggcttgaactggcagtatgcagggaacca
tcagacactgaggaggaagaagaagaggaagaaatggagcagatgaatgaaagcgcgtca
ggcaacagtgatgactgcaacagtgaggaggatgtgaagagtaataagcgactaacaagc
agggaaagtgccataaaagcaaaaagaagaagagtgttggattctgacagtgatcatgat
ggctctgatgtagagttcaagcctgatatgaaagaaacaggaagcagtgaggaagctagt
agtggagtggatgaagatgaatctagtgacacagagacagatgctgagagtgttccagaa
agtcctataaaagtcccttctaaacgcaagagaagagagagaagcaagcctgctaaaagg
agtagcttagaaaatgaacgttctgaaacgcccaaaagagcagtagctgtttcttcagaa
gccaagtctaagctgacatcgtttgcagcacctgaaagttttgaatctcaagcaaatcct
tgcagtggaggcatcagtggctttgcagtatgggaacatgaaaagcttgattggctgcag
gaagggaaaaagaaagacgcgcacaggaaacggcagggtgaccctgattatgacccgtgt
actctgtatgtacctgaggactatctcaataagtgtacaccaggaatgcgcaggtggtgg
cagctgaaaagtcaaaactttgatgctgtgatttgctacaaagttggaaaattctatgag
ttgtatcatatggatgcagtcattggcgtaaatgagttgggcctgatcttcatgaaaggt
acttgggcccattcaggttttccagaaactgcgtttggcagattctctgatgttctagtg
caaaaagggtacaagatagcccgtgttgagcaaacagaaactccagaaatgatggaaacg
cgctgcaagtcgatggcccacccaacaaaatttgacaaggttgtacgccgagaaatatgc
agaatcatcaccaaaggcactcaaacttacagcattctagattgtgatccctctgagaac
cacaacaaataccttctgtgcgttaaggaaaaagaagactcctctggacaacgtgtttat
ggggtctgctttgttgacacgtcagtggggaagttttatgtaggccagttctcagatgac
cggcactgttcgaggtttaggactttagtagcgcattacactcctgtgcaggtactgtat
gagaaggggaacctgtctgtggacacacagaagatactgaagggctcacttgtttcttgc
attcaggaagggctgatctctggttctcagttctggaatgcatctaaaacactaaaagtc
cttcttgaagaaggatatttcaaggagaatcagaactctgaaaatggatgttccctgccc
tctgtaatcaaatctctgacttcagagagtgactcgctgggattaactcctggtgaagac
agtgaattagctttgtcagctcttgggggatgtgtcttctatctcaaaaaatgtctgatt
gatcaggagctgttatcgctgggaaattttgaggaatatgtccctgtggatattgatact
gcaaaaactgtgagttcaagtagtttctttggcaaaactgaccagcggatggtgctggat
ggagtcactctgatgaacttggaagtcctgcagaacggaaccaacggaaccacagaaggt
actttgttggaaaggattgattcttgttgtacaccatttgggaagcgactgctgaaacag
tggctctgcgctccgctttgtaatcctaaatccatcaatgatcgtttggatgctgttgag
gaccttctggcagtgccagataaagtgtctgaagttagtgagcatctgaagaaacttcct
gaccttgaaaggctgctcagcaaaattcacagtatcggatcaccacttaaaagtcagaac
catcctgacagcagggccatcttttatgaagaaatcaaatacagcaaaaaaaaaattgct
gactttttgtctacactggagggatttaaagtaatgaatgaaattgtcgatgtcatggaa
gaaattgccagtgacttcaaatctaaaatccttaagcagctagtcacccgcaaagccaaa
aatccagatggccgcttcccagacttgagtgcagagcttaaaagatgggatactgccttt
gatcataaccaggctcgaaagacgggagtgattactccaaaggcaggctttgaccccgat
tatgataaagcactacaggatattaaagctgttgaggaagaccttcacaagtacctggac
aagcaacgcaaactgcttggattcaaatccatgctctactggggtgcaggcaaaaaccga
taccaaatggaaataccggaaagtgtaatatcgcgtaacttgcctgaggagtatgagttg
aagtcaaccaggaagggatataagcgctactggaccaaggagattgagaagatgctggct
gcaatggttaacgctgaagagcgcagagatgcagcactaaaagactgtatgcggcgtttg
ttttacaactttgacaaaaatagcaaagactggcagacagctgtggaatgcattgctgtg
ttagatgtcttgatgtcccttgctaactacagtcaagacggtgatggaccactgtgccga
cctgtaattctactgcctgtggatagtgctcctcccttcctggaacttaaaaattcacgt
catccatgcattacaaaaactttctttggggatgattttattcctaatgacatcgtgata
ggcagcaaagatgaagatagcagtagtgaagcttcctgtgtgttagtaaccggcccaaat
atgggtggcaaatctacacttatgagacaggctggtctcctggttataatggctcaactg
ggatgctatgtacctgctgaagcctgcaggcttacgccgattgacagagtatttacgagg
cttggtgcctcagacagaattatgtcaggtgaaagtaccttctttgttgaattgagtgag
acttctagcatcctccagcatgcaacgcagcattcccttgttcttgtggatgaactgggc
agaggcacagctacttttgatggaacagctatagcaagtgcagttgtgaaagaacttgcg
gagaaaatccagtgtcggacgctgttctccacacactaccattcgctggtagaggatcat
tcacacaacgtggctgtgcggctcggtcacatggcatgtatggttgaaaacgagagtgaa
gatccaagccaggaaacaatcacattcctgtataagttcattgaaggagcatgtccaaag
agctatggcttcaatgcagcaaggcttgctaatattccagaagaagttattcagaagggg
cacagaaaagcaaaagagtttgaaaaaatgacaatttcactgagagtatttaggtatctg
tgcctggtggtggatggtgcaacaagtgatgcaaacgcagttcagaaacttactgctatg
atcaagcatctttaa
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