Chlamydotis macqueenii (Macqueen's bustard): 104487040
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Entry
104487040 CDS
T08437
Symbol
COL4A2
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac04510
Focal adhesion
cmac04512
ECM-receptor interaction
cmac04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104487040 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104487040 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104487040 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmac04147
]
104487040 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
cmac00536
]
104487040 (COL4A2)
Exosome [BR:
cmac04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104487040 (COL4A2)
Glycosaminoglycan binding proteins [BR:
cmac00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104487040 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104487040
NCBI-ProteinID:
XP_010128198
LinkDB
All DBs
Position
Unknown
AA seq
1410 aa
AA seq
DB search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NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
ggttttccaggatttgatggtccaccgggtggctatggtcctaggggaagcaagggagag
gcaggcgagataggtcttccaggaccagtttcctattttccctcccgcatcccaaggaaa
ggtgcaagaggtgatccaggctttccaggtgcttctggactacagggagacccaggagag
gagggagatcgtggactgcctggtctgcctggattctctgatgcggatggggataagcca
ggcttacctggagaagtgggaccaaaaggtgaaaaaggtgaattaggatctcctgcttat
cagatgggcccacctgggtttccgggtaagcacggcacaccaggactccgtggtctacct
ggtcctgctggatcccctggttcgctctttggattgaaaggacaggaggggacgccaggt
agatttggcgtgcaaggtttccctgggccaagaggacaaaaaggacctaaaggcgaggaa
ggggattgcagtgcatgccttctgggtgatgaaatcagaagagggtctactggcccccct
ggccctcctggctttccaggagcccctggccagcctgggaggaaaggagaacctggtgat
caaggaccacatggtattcctggctactctggagtaaaagggttttcgggtcaagttgga
tttcctggaccaaaaggagaaaagggagattctatacacataactactaaaggcaccaaa
ggaatccaaggagatcctgggctgcctggtatcagaggtgaagatggtttcccaggcaga
gatggattagatggtttaccaggacagcctggccttccaggtgatggtatcagaggtttc
cccggtgatcctggttatccaggcgaattaggcccaaagggctttccaggcgaagcaggc
ccaccgggtgaaggatttcctggtccaaaagggtaccggggtcctccaggtgaccacgga
caagatggaaacccaggacctccaggtctgcccggtctaccaggagagcctggccagcta
gactgtgggcaggtcattgaagacttttctagaggagatggaaccgagccaatatggtca
ggcgcgggctgtgtgaggccaccaaagggatcccaaggcaaaccaggactgccaggagcc
acaggtgcaaaaggtgcaagaggattcccaggtgatccaggtccagtgggatacccaggg
ttaaatggtacacgaggtgatccaggtcgggagggattcccaggtcctccaggttttact
gggcccaggggagacaggggccccaacggtctacctggactacagggacatccaggcctt
acaggaaaatccggtgctccaggagcagcaggactgaagggctttcctggtgacgtttta
ggagcagcagcaggttccccaggggatgtcgggctccccggcttcccagggttgaaaggc
atgccaggagatcaaggagtaccaggagttagaggagcggatggtaacccaggttttcca
ggacccaaaggagatccagggccacaaggtctccctggtttgatgggattgccaggatta
ccaggaacacgtggattcccagggctaccaggaaaccctgggccagatggtgggcctggc
ttgcagggacctattggcccacctggtgctaggggagaagatggtgagcaaggttttcct
ggtcctgtgggcctgaagggtctgtctggtgacaaaggtgaaacaggtcacccaggatta
caaggtatacctggcgtgactggtccccctggcataggcggaatggatggctttccagga
gataaaggcttaaaaggttcacctggaattgacggtttcaaaggcatgacaggcctaaaa
ggaagaccaggcatcaagggaaccaaaggagaatttggccccattgggactcagggtgat
aaaggcgctcagggcacacgaggctttaaaggtgatcgcggggatcgaggccccccagga
gaacccccaaagctcaagcccagcatgatgatggaagttaaaggtgaaaaaggagatgtt
ggagaaaggggcacaaaaggattatttggcttaaaaggtagcaagnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnngcattcctggaaagacaggaactccagggtcccctgggcatccc
agctacgtggctggtgtgaaaggggacgtcggcgcaaaagggctgacaggtctcaaaggg
tatcctggtccggccggctctcctggaatcagaggcttccctggcagcacaggaggcaga
ggagaaaagggtattccaggaatttcaggccattttggtactcctggctcgcatggtgaa
ataggtgagcagggagaaactataaacttacnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
ggaatgccaggccttaaaggagaagttggtgtcccaggcttaacaggcacaagaggaggc
acaggacaaaaaggtgaaggcggtgatcctggttcctctggcattgaaggcctcaagggc
acccagggagtccctggctctgtgggacaggaaggtttgccaggactggttggcccccca
gggcaacaaggaagccctggtacacctggatttcaaggtgaaaagggaagccccggctgg
cccggcttaccaggacaagcaggcttgcctggcttaagaggaatcagtggactgcatggt
ttacccggcactaagggcttaccaggatcaccaggtccagatggctacggctctgcaggt
ttcccaggtgcagtgggtgacaaaggggaagcgggagagccgagcagagtggaaggcagc
cgaggacctccgggtcagaagggagacagaggcgttccaggagtccaaggaccctttnnt
tctgggcaggaaggatttccagggcctcctgggatttcaaatatatcaggatatcctggt
gataaaggctccccaggtctagatggagtgccaggctatccaggactacaggggcagcct
ggaataccggctccaccaggaagcaaaggagaaagtggacaaacaggtgtgagtggacaa
attggcccaaaaggaagtagaggtgatcctggattaccagggagacctggcgttcccggg
tatcctggaccaaaaggtcgtaggggtgaacaaggtgtcatcggctttatgggcaccata
ggatttccgggtgatttgggacctatcgggcccaagggagatagaggagtaactggtttt
cagggccctccaggctctcctgggttgccccctcttcctccaaggctggttgctgagcaa
ggttcaccaggtccccgtggaaatataggacctcaaggaagcccaggagatatgggacct
cagggtccaccaggcgatccaggtttcagaggctcacctggagacccaggactccagggc
aggggtggcattccagctcctcccggctccagaggtgaacaaggagcaacaggatttcag
ggtccagtgggatttgaaggtcagccaggccgccccggtagccccgggctgccaggcatg
ccgggtcgcagcattagcatgggctacctgctggtgaagcacagccagtccgatcaagag
ccaatgtgtccgattggcatgaacaaactctggagtggatacagcctactgtactttgaa
ggacaagagaaagcacacaaccaggatctagggctggctggctcatgtttggctcgtttt
agtactatgccattcctctactgtaaccctggggatacttgttattatgcaagtcgaaat
gataaatcctactggctctcaactacagcacctcttccaatgatgcctgtggcagaagaa
gacattaggccatatatcagtcgctgctcagtttgtgaggccccagctgtggcaattgct
gtccatagccaagaagcttctattcctcactgccctgaaggctggcgcagtttgtggatc
ggatattccttcctcatgcacactgctgctggggatgaaggtggaggacagtcgctggtt
tctcctgggagctgcctggaagatttcagagcgactcctttcatcgaatgcaacggcgca
cgcggaacctgtcactactttgcaaataaatacagcttctggctcaccacggtcgaccag
cccttccaaagcaagccctcagcagatacgctcaaggcaggactcatccgaagccatatc
agcagatgtcaagtctgtatgaaaaatttatag
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integrated database retrieval system
