Chlamydotis macqueenii (Macqueen's bustard): 104487040
Help
Entry
104487040 CDS
T08437
Symbol
COL4A2
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac04382
Cornified envelope formation
cmac04510
Focal adhesion
cmac04512
ECM-receptor interaction
cmac04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104487040 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104487040 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104487040 (COL4A2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104487040 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmac04147
]
104487040 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
cmac00536
]
104487040 (COL4A2)
Exosome [BR:
cmac04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104487040 (COL4A2)
Glycosaminoglycan binding proteins [BR:
cmac00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104487040 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104487040
NCBI-ProteinID:
XP_010128198
LinkDB
All DBs
Position
Unknown
AA seq
1410 aa
AA seq
DB search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NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
ggttttccaggatttgatggtccaccgggtggctatggtcctaggggaagcaagggagag
gcaggcgagataggtcttccaggaccagtttcctattttccctcccgcatcccaaggaaa
ggtgcaagaggtgatccaggctttccaggtgcttctggactacagggagacccaggagag
gagggagatcgtggactgcctggtctgcctggattctctgatgcggatggggataagcca
ggcttacctggagaagtgggaccaaaaggtgaaaaaggtgaattaggatctcctgcttat
cagatgggcccacctgggtttccgggtaagcacggcacaccaggactccgtggtctacct
ggtcctgctggatcccctggttcgctctttggattgaaaggacaggaggggacgccaggt
agatttggcgtgcaaggtttccctgggccaagaggacaaaaaggacctaaaggcgaggaa
ggggattgcagtgcatgccttctgggtgatgaaatcagaagagggtctactggcccccct
ggccctcctggctttccaggagcccctggccagcctgggaggaaaggagaacctggtgat
caaggaccacatggtattcctggctactctggagtaaaagggttttcgggtcaagttgga
tttcctggaccaaaaggagaaaagggagattctatacacataactactaaaggcaccaaa
ggaatccaaggagatcctgggctgcctggtatcagaggtgaagatggtttcccaggcaga
gatggattagatggtttaccaggacagcctggccttccaggtgatggtatcagaggtttc
cccggtgatcctggttatccaggcgaattaggcccaaagggctttccaggcgaagcaggc
ccaccgggtgaaggatttcctggtccaaaagggtaccggggtcctccaggtgaccacgga
caagatggaaacccaggacctccaggtctgcccggtctaccaggagagcctggccagcta
gactgtgggcaggtcattgaagacttttctagaggagatggaaccgagccaatatggtca
ggcgcgggctgtgtgaggccaccaaagggatcccaaggcaaaccaggactgccaggagcc
acaggtgcaaaaggtgcaagaggattcccaggtgatccaggtccagtgggatacccaggg
ttaaatggtacacgaggtgatccaggtcgggagggattcccaggtcctccaggttttact
gggcccaggggagacaggggccccaacggtctacctggactacagggacatccaggcctt
acaggaaaatccggtgctccaggagcagcaggactgaagggctttcctggtgacgtttta
ggagcagcagcaggttccccaggggatgtcgggctccccggcttcccagggttgaaaggc
atgccaggagatcaaggagtaccaggagttagaggagcggatggtaacccaggttttcca
ggacccaaaggagatccagggccacaaggtctccctggtttgatgggattgccaggatta
ccaggaacacgtggattcccagggctaccaggaaaccctgggccagatggtgggcctggc
ttgcagggacctattggcccacctggtgctaggggagaagatggtgagcaaggttttcct
ggtcctgtgggcctgaagggtctgtctggtgacaaaggtgaaacaggtcacccaggatta
caaggtatacctggcgtgactggtccccctggcataggcggaatggatggctttccagga
gataaaggcttaaaaggttcacctggaattgacggtttcaaaggcatgacaggcctaaaa
ggaagaccaggcatcaagggaaccaaaggagaatttggccccattgggactcagggtgat
aaaggcgctcagggcacacgaggctttaaaggtgatcgcggggatcgaggccccccagga
gaacccccaaagctcaagcccagcatgatgatggaagttaaaggtgaaaaaggagatgtt
ggagaaaggggcacaaaaggattatttggcttaaaaggtagcaagnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnngcattcctggaaagacaggaactccagggtcccctgggcatccc
agctacgtggctggtgtgaaaggggacgtcggcgcaaaagggctgacaggtctcaaaggg
tatcctggtccggccggctctcctggaatcagaggcttccctggcagcacaggaggcaga
ggagaaaagggtattccaggaatttcaggccattttggtactcctggctcgcatggtgaa
ataggtgagcagggagaaactataaacttacnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
ggaatgccaggccttaaaggagaagttggtgtcccaggcttaacaggcacaagaggaggc
acaggacaaaaaggtgaaggcggtgatcctggttcctctggcattgaaggcctcaagggc
acccagggagtccctggctctgtgggacaggaaggtttgccaggactggttggcccccca
gggcaacaaggaagccctggtacacctggatttcaaggtgaaaagggaagccccggctgg
cccggcttaccaggacaagcaggcttgcctggcttaagaggaatcagtggactgcatggt
ttacccggcactaagggcttaccaggatcaccaggtccagatggctacggctctgcaggt
ttcccaggtgcagtgggtgacaaaggggaagcgggagagccgagcagagtggaaggcagc
cgaggacctccgggtcagaagggagacagaggcgttccaggagtccaaggaccctttnnt
tctgggcaggaaggatttccagggcctcctgggatttcaaatatatcaggatatcctggt
gataaaggctccccaggtctagatggagtgccaggctatccaggactacaggggcagcct
ggaataccggctccaccaggaagcaaaggagaaagtggacaaacaggtgtgagtggacaa
attggcccaaaaggaagtagaggtgatcctggattaccagggagacctggcgttcccggg
tatcctggaccaaaaggtcgtaggggtgaacaaggtgtcatcggctttatgggcaccata
ggatttccgggtgatttgggacctatcgggcccaagggagatagaggagtaactggtttt
cagggccctccaggctctcctgggttgccccctcttcctccaaggctggttgctgagcaa
ggttcaccaggtccccgtggaaatataggacctcaaggaagcccaggagatatgggacct
cagggtccaccaggcgatccaggtttcagaggctcacctggagacccaggactccagggc
aggggtggcattccagctcctcccggctccagaggtgaacaaggagcaacaggatttcag
ggtccagtgggatttgaaggtcagccaggccgccccggtagccccgggctgccaggcatg
ccgggtcgcagcattagcatgggctacctgctggtgaagcacagccagtccgatcaagag
ccaatgtgtccgattggcatgaacaaactctggagtggatacagcctactgtactttgaa
ggacaagagaaagcacacaaccaggatctagggctggctggctcatgtttggctcgtttt
agtactatgccattcctctactgtaaccctggggatacttgttattatgcaagtcgaaat
gataaatcctactggctctcaactacagcacctcttccaatgatgcctgtggcagaagaa
gacattaggccatatatcagtcgctgctcagtttgtgaggccccagctgtggcaattgct
gtccatagccaagaagcttctattcctcactgccctgaaggctggcgcagtttgtggatc
ggatattccttcctcatgcacactgctgctggggatgaaggtggaggacagtcgctggtt
tctcctgggagctgcctggaagatttcagagcgactcctttcatcgaatgcaacggcgca
cgcggaacctgtcactactttgcaaataaatacagcttctggctcaccacggtcgaccag
cccttccaaagcaagccctcagcagatacgctcaaggcaggactcatccgaagccatatc
agcagatgtcaagtctgtatgaaaaatttatag
DBGET
integrated database retrieval system
