Chlamydotis macqueenii (Macqueen's bustard): 104487071
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Entry
104487071 CDS
T08437
Symbol
PCDH9
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-9
KO
K16498
protocadherin delta 1
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104487071 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmac01009
]
104487071 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cmac04515
]
104487071 (PCDH9)
Protein phosphatases and associated proteins [BR:
cmac01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104487071 (PCDH9)
Cell adhesion molecules [BR:
cmac04515
]
Cadherins
Protocadherins
104487071 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Big_9
MAP17
V_ATPase_I
EphA2_TM
RET_CLD1
RCR
DUF6249
7tm_3
DUF6377
Motif
Other DBs
NCBI-GeneID:
104487071
NCBI-ProteinID:
XP_010128240
LinkDB
All DBs
Position
Unknown
AA seq
1044 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAVAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSTTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RFFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRXXXXXXXXXXASRVFDREEQE
RFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITV
TDADAGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAVDGGQPPRS
STAKVTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMIAALKYT
IVSGNNKGLFRIDPVTGNITLEEKPTPNDVGLHRLVVNISDLGYPKSLHTLVLVFLYVND
TAGNASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLV
RCRHASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAV
HEPINGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPV
SVKKHHVIQELPLDNTFVGGCDTLSKRSXXXXXXXXXXSSDHFSASECSSQGGFKTKGPL
HTRQVNEHFYWSISTAYKCPINQY
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggccgctttgattgcctgtttaaggctggattct
gcagtagctcaagaacttatttacactattagagaagagctgcctgaaaatgtacccata
gggaacataccaaaggacctgaacatttctcacatcaatgctgccacggggaccagtgcc
agccttgtctacagactggtgtctaaagcaggagatgcccctctggtcaaagtgtccagt
accacgggggaaatctttacaacatctaacagaatagacagagaaaaactctgtgctgga
gcttcctatgcagaagaaaacgagtgtttctttgaacttgaagtggtgattctccccaat
gacttttttaggctgatcaaaataaaaataattgtaaaggatactaatgacaatgcacct
atgtttccgtcccctgtcatcaatatctccatcccagaaaacactctgatcaacagtcgc
tttccaatcccgtcagcaacagatcctgacacaggtttcaacggtgtgcagcactacgag
ttgttaaatgggcagagtgtcttcggactggatattgtagaaactccagaaggagagaaa
tggcctcagctgatcgtgcagcagaacttggacagagagcaaaaggacacctacgtgatg
aaaatcaaagtggaggatggaggtaccccccagaaatccagcacagccatcctgcaagtc
acagtaagtgatgtcaatgataacaggccagtgtttaaggaaagtcaagtagaggttcac
ataccagagaatgcccctgtaggcacttctgtaattcagcttcatgctacagatgcagat
ataggaagcaatgcagaaatcagatacatttttggtgcccaagttgcccctgcaaccaaa
agattttttgctttaaacaacaccacagggctgattacagttcagaggtccttagatcga
gaagagactgctattcacaaagtgacagtgctggcgagtgacggtagctctacgccggct
cgggcaacagttaccatcaatgtcacagatgtaaatgataaccctcctaacatagacctc
aggtacataataagtcccatcaatggcacagtgtacttatctgagaaagatcccgtcaat
acaaagattgccctaattacggtttcagataaggacactgatgtgaacggcaaagtgatc
tgtttcattgagagagaggtccccttccacctgaaggcggtttacgacaaccagtatttg
ttagagacctcttccttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcttctgattctggcaaacccagtttgaaccagaccgccctggtaagagttaaactggag
gatgaaaatgacaaccctccgattttcagccagcctgtaattgagctgtcagtttctgaa
aacaaccggcgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggccctaatgcctcctttttcgatctggatcgnnnn
nnnnnnnnnnnnnnnnnnnnnnnnncagcctccagagtttttgacagagaggagcaggaa
cgtttcattttcactgttacggcccgagacaatggcacccctcctttgcagagtcaagcg
gctgtaattgttaccgtgttggacgaaaatgacaacagtcccaaatttactcataaccac
ttccagttttttgtatcagagaacttaccaaagtacagcacggtgggggtgatcacagtg
actgatgctgatgctggggagaataaagcggtgaccctttccatcctgaatgacaatgaa
aactttgtgctggatccctactctggagttataaagtccaacgtttcctttgatcgagaa
cagcagagctcctacacttttgatgttaaggcggtggatggagggcaacctcctcgctct
tccacagcgaaagtaaccataaacgtcatggatgttaatgacaacagccccgttgtcatc
tacccaccttctaatacttcttttaagctagtgccactctcagcaattccaggatcggtg
gtagccgaagtgtttgcggtggatatagatactggaatgattgccgcgcttaagtacaca
atagtaagcgggaataacaaaggtttgtttcggattgatccagtgacaggtaatatcact
ctggaagaaaaaccaactcctaatgatgtgggtttgcatcgcttggttgtcaacataagc
gatctgggttatcccaaatccctgcatactctcgtgcttgtgtttttgtatgtaaatgat
actgcgggaaatgcctcttacatttatgacttgatacgcaggactatggaaacacctttg
gaccggaacataggggacagtagccaaccctaccaaaatgaggactatctcacaatcatg
atcgctatcgtggcaggtgccatggttgtcatagtggtgatatttgtcacggttctcgtg
cgctgtcgacatgcatccagattcaaagctgcccagaggagcaagcaaggtgctgagtgg
atgtctcccaaccaggagaacaagcaaaacaagaaaaagaaaaggaagaaaaggaaatct
ccaaagagctctcttttgaactttgtgaccattgaggagtccaaacctgatgatgcagtt
catgaacctatcaacgggacaataagccttccagcagagctggaggagcaaagtatagga
agatttgattggggcacagcaccaccaacaaccttcaagcctaacagtcctgatcttgcc
aagcattacaaatctgcctctccacagtctgcttttcatctcaaacctgacactccagtt
tcggtgaaaaagcaccatgtgattcaggaactcccgttggacaacacctttgttggtggc
tgtgacaccctttccaaacgctcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntagttca
gatcacttcagtgcctcagagtgcagttcccaaggaggcttcaagacaaagggcccctta
cacaccagacaggtaaacgagcacttttactggtctataagtactgcatacaagtgcccg
atcaaccagtattaa
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integrated database retrieval system
