Chlamydotis macqueenii (Macqueen's bustard): 104487336
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Entry
104487336 CDS
T08437
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmac03019
]
104487336
Enzymes [BR:
cmac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104487336
Messenger RNA biogenesis [BR:
cmac03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
104487336
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN-like_DDX60
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
104487336
NCBI-ProteinID:
XP_010128552
LinkDB
All DBs
Position
Unknown
AA seq
1243 aa
AA seq
DB search
MDSAERNFKKVVRNDANMNASDDDKHSECSDGEKIGFIPTKEDKESGSKSNSDEHHDTSD
IAEAAIKQMLKEEEDREKEAEDLDYNDAHGIVTTEVTQLASQTEDQDFRVLPHQCDSQSP
EIKHVEFLKKLRLHIWACLSRAQYVSLLKDFVESEFFVIDGDSLLLMFLDEKIQYLNFFY
QIECFLQDFTEKGAKYVIVFFKDAEQMYFPYPCFLFLRTALIEHLRHNTGTTVHTEFSNC
LSSKWEIFLKKSYPYFIIVSDVGLTSLQTDYLSILIAHSLSKKINVVLASGQEYDILRVY
GYHVQNVFKHRLFFQKYKRDLQYACENLVKYREPFVCLYEHLKLSLKTIEEEVCQTVQLL
KQLWPKGSDIRRVVCVLASSVALKIYSKMLENASTSVRTKTKRSARGRSKPLSPEEAADL
CRIQCLTVAFLLHMPLSQRAQIRIMKSCWTKQVLPLIKMQQLCTYFALTQLSDTNDWKLD
LTYLPDLNDDSLLMNLAHYYENKCTEGLEFEKELGKELENEYQCLWNTVQKLSVKYSLGD
AFPVRKTSQLFLEQQQTVFRDYAEEIPKIGLISVKSDLVKEYAGDVLKDLPVLGSNDPSV
TSLIKSKEFHELRHWHSGRPLTEEYERVQCNADAKSKDPEERRQIQKLQTFLHFYGSTLE
DSPSKLIVHQGDVSRNANAAVKKTQKKHKSKAETIAEENSRRLKTKEEQKEQEQWKALCI
PTEKEIKANLTVGINKLEKFLKTFKSKSVKFSIEMTGLSACLEVWKEHCREQGDRSKDLS
KAVQVMRRIHILLEKYQDLLEKSHLQKLTRYLRLLGFENLACSLSAQTEESKNQNISNYA
IKVGPARFQLQYMDYYLLREERNDPDPRVQHFIPDTWQRELLDAVDNNESAVIVAPTSSG
KTYASYYCMEKVLKTSNEGVVVYVAPTKALVNQVVGTIYSRFTKNLPDGLVVCGVFTRDY
RNDVLNSQILVTVPQCLEILMLSPRCQNWTKRIQYVIFDEVHCLGGEIGAEVWEHLLVTI
RCPFLALSATVSNPEHLTEWLQSVKRYWQRAKNTIERSSMNTENTRNCKVKSKVQEQKKS
YRVRLVLYEERYNDLEKYVCSLKGSDFVIEHCHPCAALTVNHIENYGFPLDLSLSPRESI
QLYDTMVKVWQKWPRAQELDPEEFVSFKNKVVIKKADVRKYEQELKKELSRWIVLGQRQK
VNKLLEHLKPKPVDCSEREKWKHFASFVDKLHEMDKLPAIFFM
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggattctgcagaacgtaatttcaagaaagttgttcgtaatgatgcaaatatgaatgct
agtgatgatgataagcatagtgagtgtagtgacggtgagaaaataggcttcattccaaca
aaggaagataaagagagtgggagtaaaagcaacagtgatgagcatcatgacaccagtgac
atagcagaagcagctattaagcagatgcttaaagaagaggaagatagagaaaaagaagct
gaagacctagattacaatgatgctcatggtatcgtaaccactgaagtgacacagctggca
tcacaaactgaagaccaggatttcagagttctcccgcaccaatgtgattcccaaagccct
gaaataaaacatgttgaatttctgaagaagttgaggctacacatttgggcatgcctgtca
agagctcagtatgtcagtctgttaaaagactttgttgagtctgaattctttgtcatagat
ggagattccttactacttatgtttttagatgagaagatacaatatctaaacttcttctac
caaattgaatgcttcctgcaggatttcactgaaaaaggagcaaaatatgtcattgttttc
ttcaaggatgcagaacagatgtactttccatatccttgttttcttttcttacgtactgcg
ttaatagagcacctgaggcataacacaggcaccactgttcatacagagttttcaaattgt
ttatcatccaaatgggagattttcctgaagaaaagctatccttacttcatcatcgtatct
gacgtaggactgacctctctccaaacagactatttatctattttaattgctcattcattg
tcaaagaaaataaatgtcgtacttgcttcaggacaggagtatgatattcttagagtttat
ggataccacgttcagaatgtgtttaaacacagattgttttttcagaagtataaacgagat
ctgcaatatgcctgtgaaaacctggtcaagtacagagaaccattcgtgtgtctatatgaa
catctcaagctaagcctgaaaaccatagaagaagaggtttgccagactgtccagctgttg
aaacaactgtggcctaaaggatctgatattcgacgtgtggtctgtgttcttgcttcttct
gtggcattaaaaatatacagcaagatgctggaaaatgccagtacatctgtgagaacaaag
acaaagcgatcagcaagaggaagaagtaaacctctgtctccagaagaagcagctgacctc
tgtaggattcagtgtcttacagtggcttttcttcttcacatgcctctttcacagagagcc
cagatcaggatcatgaaatcctgctggactaagcaagttttgccgttaataaaaatgcaa
cagttgtgtacgtattttgctctgacacagctaagtgatacaaatgattggaaattggat
ttaacttacctgcctgacttaaatgatgattcactgctcatgaatcttgcacattactat
gagaacaaatgcactgaaggattagagttcgaaaaggaattggggaaagaattggagaat
gaataccaatgtttatggaacactgtacaaaaattgtctgtgaaatacagcttaggagat
gctttcccagtacgaaagacctcccaactatttcttgaacagcaacagacagtgtttaga
gactacgcagaagaaattcctaagattggactaatctcggtgaaatctgatcttgttaaa
gaatatgctggagatgttttgaaagacctacctgttttaggaagcaatgatccttcagtt
acttcacttattaaatccaaggaatttcatgagcttcgtcactggcattctggcagacct
ttgactgaggaatacgagcgagtacagtgcaatgctgatgcaaaatccaaagatccagaa
gaaagaagacaaatacagaagttacagacatttcttcatttttatggaagcactttagaa
gatagcccttcaaaacttattgtacatcaaggggatgtgtcaaggaatgctaatgctgct
gttaaaaagacacaaaaaaagcataaaagtaaagcagaaacaattgcagaggaaaacagc
aggcgactgaaaactaaagaagaacagaaagaacaggagcaatggaaagccttgtgtata
ccaactgagaaggaaataaaagcaaatctgactgttggaataaataaattggagaagttt
ctcaagacctttaagagtaaatcggtgaagttcagcatagaaatgacaggactgtctgcc
tgtttagaagtgtggaaggaacactgcagagagcaaggcgacagatctaaagatttaagc
aaagctgttcaagtcatgaggagaattcatatcctccttgaaaaatatcaagatctctta
gagaaatcacatctacaaaagctgaccagatatctaagacttcttggatttgagaatttg
gcatgctctctgtctgcccagacagaagaaagtaagaaccagaatataagcaactatgct
atcaaagtgggcccagctcgctttcagctacaatacatggattattacttgcttagagaa
gagagaaatgatccagatcctcgcgtgcaacatttcataccagacacatggcagcgagaa
cttcttgatgctgtagataataatgagtctgcagtgattgtcgctcccacttcatcagga
aagacatatgcatcatactactgcatggaaaaagttctgaaaacaagcaatgaaggagta
gttgtgtatgttgctcctacaaaggcccttgtaaaccaagtggtgggaactatatacagt
cgattcaccaagaatcttccagatggattggtagtgtgtggagtcttcacacgagattat
cgcaatgacgtcttgaattctcagatactagtgactgtgcctcaatgtttagaaatcttg
atgctgtctcctcgttgccagaactggaccaaacggatacaatatgttatatttgatgag
gtccattgtcttggtggtgaaattggagcagaggtttgggagcatcttctggtgacaatt
cggtgtccatttttggcgctctctgctactgtcagtaacccagaacacctaactgagtgg
ttacagtctgtgaaaaggtattggcaacgtgctaagaatacaatagaaagaagctctatg
aacactgaaaatacaagaaactgtaaagtgaaatctaaagtacaagaacaaaagaagtca
tatcgtgttagactagtcttatatgaagaaagatacaatgatttggaaaagtatgtgtgt
tctctaaagggcagtgattttgtcattgaacactgtcatccgtgtgctgcattaacagtc
aaccatattgagaattatggttttccattagatctttctctatctccacgagagagcatc
cagctttatgacacaatggtaaaagtctggcaaaagtggccaagggcacaggagctagat
cctgaggagtttgtctctttcaagaataaagtagtaataaaaaaggcagatgtgaggaaa
tatgaacaggaactgaagaaagagctaagcagatggattgtgcttggccaaagacagaag
gtgaacaagctactggagcaccttaagccaaaacctgtggattgctcagaacgagaaaag
tggaagcattttgcaagctttgttgataaattacatgagatggataagttgcctgccata
ttttttatgtaa
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integrated database retrieval system
