Chlamydotis macqueenii (Macqueen's bustard): 104487414
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Entry
104487414 CDS
T08437
Symbol
DCHS1
Name
(RefSeq) protocadherin-16
KO
K16507
protocadherin-16/23
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cmac04515
]
104487414 (DCHS1)
Cell adhesion molecules [BR:
cmac04515
]
Cadherins
Cadherin related
104487414 (DCHS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_4
PepSY
Motif
Other DBs
NCBI-GeneID:
104487414
NCBI-ProteinID:
XP_010128674
LinkDB
All DBs
Position
Unknown
AA seq
1679 aa
AA seq
DB search
MDSGHAGTVKIPKAEVREVLEMGLGFMQGVSGAKAVLQERSRLQAREWGQLRSQAVVNTC
GGMLGCCMPLAWLLHVAKNMFQEDSLHDSPRDQSVPDKSVAPQIILLAFFEDPEHCNFMG
TAAKAAAEHRILSWFSLACKQQIQLRVTTGWPAPPENSQSRPFGMFEGVRVPSLMQVTAT
DADSGTFGSLSYSIGSGIGSVVPTQFSVDKHTGQLCTVQPLDRDEGTSAYDFTVTAVDGG
GLNSMVYVKVFLEDINDNRPVFYPLEYAASISTQSMPGTAVLRVTAHDKDEGLHGKVTYR
IVLGNSPPLFSLNKDTGVISLSWSLSGKANTLVQLVIAAQDGGGLQAQPNAQVNISIVEG
TVSPPVFEQAQYFFTVPEDMLQGANVGAVRAQNPPGHADDIFYSISSGDPHGYFSIDSAS
GQLRTSLPLDHESQAVLVLDVQARSGSPPAYSNTRVKISVSDVNDNAPVFPASSDSILLP
EATEPGTTVYTLQAEDRDSGANGQVNFELVSGGDGTFSVERSSGAVRLVGALQYEANAAY
RLAIVARDSGVPQLSSTFTLLVHVQAEHDNGPIFDTLTYRVEVREGVPVSTRFLQVRALA
HDAESVTLTYHLRADGDAASFGIMPESGWLYVKSALDRETRDLYVLTVLASAGGGGAGGE
ARKTGTSTVRISVTDENDNSPRLSEERYFFTVPENQAPGSSVGRVMASDRDAGQNSRLTY
RLLQHDPNFLIHTQTGELSTKHSLDREQQSSYQLLVIVQDGGAPPRSATGTIYVTVLDEN
DNAPAFLHVASGQELPVQVLEEKPSGLLVASLQAKDPDEGENGTIIYSLIGAWAERFTLH
VATGELRTATVLRRSDRAEYIFTVTASDRGTVPRSTSAIIRIQVLPSSRVLPRPDATVLT
LHPLEGVKPGSVIGSVAPPDAPARGQLTYTVVGGGGDGTFVVDSVTGEIYAARELDYEAG
ARHVLQVSAEDTQHGYPSSRLVLVQIHVQDCNDQTPTFPEDPITIVVPENAQAGSSIFTF
QALDGDGVGPNSQVRYALLHQEPPGAPFHLDSRSGLLTLRQGLDREAAASFLLVVEAMDQ
ARNVSQRRSAAVTARVFVTDENDNVPLFLSPAAVTVMEDQPTGFVVLHVVAQDNDLGENG
RVSYSLRAGNSDGRFHLNPSTGALSIVRALNREEVMQHNLTVVAMDHGFPRRSATQLLSV
LVLDVNDEAPTFEKPEYEAHIMENLPAGSPVLRVLAMDRDMGANGQVSYGGLSGGPFSIH
PQTGLIVTTHALDREEQEQHVLMVYAQDGGLPPKLSKATVRITVGDENDHAPHLESESCS
VEVPENQSRVALYTLRATDPDGGENGRLEYHVADGDPGQDFSLDPVSGVLSTARALDREQ
VASYSLTVVVQDHGTPPRSATMSVNVRVLDLNDNAPDFAQATYAVEVPEDLPVGALVLQL
AAKDPDEGTNGQVSYYLGNESLGMFQVEPQSGRIRSAQALDRERHPSYSFLAKAVDSAPW
EPKSTAVRVTVTVRDVNDHAPAFLHSPLTVNLSRHTPLKQVVATMRAEDRDAGANASILY
RLATPNSAFAINSYTGDIQLLQPLGSLSQRQRTLFILATDLGQPALSSTGVVVIHLQEEP
YRGLRFPRSTSDVALPENAAPGTAVASIQAVHTGGSSGRITYSIVSGNERNAFLIQPSS
NT seq
5038 nt
NT seq
+upstream
nt +downstream
nt
atggattctggacatgctggaactgtgaaaatacccaaggcggaagttcgggaggtgcta
gagatgggcctgggcttcatgcagggggtcagtggagccaaggccgtgctgcaggagaga
agcaggctgcaggcgagggagtgggggcagctgcggagccaagcggtggtgaacacgtgt
ggagggatgctggggtgctgcatgcctttggcttggctcctccatgtggccaaaaacatg
ttccaagaggattcactccatgactctcccagggaccaaagtgtgcctgacaagagtgta
gctcctcagatcatccttttggccttttttgaagatcctgaacactgcaacttcatgggc
actgcggccaaggctgctgctgaacaccgcatcctcagttggttctcccttgcttgcaaa
cagcagatccagctgcgtgtcaccactggttggcctgctcctcctgagaacagccagtct
cggcccttcgggatgttcgaaggagtcagagtgccttccctcatgcaggtgacagccacg
gatgcagacagcggtacgttcggctccctttcctactccattggctctggcatcggcagt
gttgtccccacgcagttcagcgtcgacaagcacacagggcagctctgcactgtgcagccc
ctagatcgtgatgagggcacgtctgcctatgatttcaccgtcaccgctgttgatgggggt
ggcttgaactccatggtctatgtgaaggttttcctggaggacataaatgataaccggcca
gtgttttacccgctggagtatgctgccagcatcagcacacagagcatgccaggtacagct
gtactccgtgttactgcccatgacaaggatgagggactgcacgggaaagtgacctaccgc
attgtcctgggaaactcaccgcctctcttctccctcaacaaggacacaggtgtcatctcc
ctctcatggtccctgagtggtaaagccaacaccctggtacagctggtgatcgctgcacaa
gatggtgggggcctacaggcacagccaaacgcccaggtgaacatcagcatcgtggagggc
acggtctcaccccctgtctttgagcaagctcagtacttcttcacagtgcctgaggacatg
ctgcagggtgccaacgtgggcgctgtccgggcccagaaccctccaggtcatgctgatgac
atcttttattccatctcctcgggagatcctcacggttacttttccatcgactctgcctcc
gggcagctccgtaccagcctgcctctggatcatgagtcccaggcagtcctcgttctggat
gtccaggcccgaagtggttcaccccctgcctacagcaacacacgcgtgaagatctctgtg
tcggatgtgaatgacaacgcgccagtgttcccagcctcctccgactccattctgctgcca
gaagccacagagcctgggactacagtgtacactctgcaggccgaggaccgtgacagtggt
gccaacggtcaggtgaattttgagctggtctcaggaggtgacggcaccttcagtgtggag
cgctcgtcgggggcagtgcgactggtcggggccctgcaatacgaagccaatgcagcctac
aggctggccatcgtggcccgagacagtggcgttccccagctcagctccacgttcacgctg
ctggtgcatgtgcaagccgagcacgacaacgggcccatctttgacaccctcacctaccgc
gtggaggtgcgggaaggcgtgcctgtctccactcgcttcctgcaagtgcgagccctggca
catgacgcagaatccgtgacccttacctaccacctgcgtgcagacggggatgctgccagc
tttggcatcatgcctgagagtggctggctgtacgtcaaaagtgcactggaccgggagaca
cgggacctgtatgtgctcacagtgctggcctcggcgggaggcggtggtgcagggggggaa
gctcgaaaaacaggcaccagcaccgtacggatcagcgtcactgatgagaatgacaacagc
ccccggctgagcgaggagcgttatttcttcactgttcctgagaatcaggctcctggtagc
agtgtggggagggtgatggcgagtgaccgggatgccgggcagaacagccgtcttacctac
cgcctgctccagcacgatcccaactttcttatccacacacagacaggggagctcagcacc
aagcatagcctggaccgggagcagcagtccagctaccagctcttggtgattgtgcaggat
gggggagcaccgcctcgcagtgccacaggaaccatctatgtcactgtgctggatgagaat
gacaacgctcctgctttccttcacgtggccagtggccaggagctgcccgtgcaggtgctg
gaggagaagccgtcgggacttctcgtcgcctccctgcaggccaaggaccctgacgagggt
gagaacgggaccatcatctactcgctgataggagcctgggcagagcgtttcacactgcac
gtggctactggagagctgcggactgccacggttctacgccggtctgatcgtgcggagtac
atcttcactgtgacagccagtgaccggggcacggtgcctcgcagtacctcagccatcatt
cgcattcaggtgctgccatcctcccgcgtgcttccacggcctgatgccactgtgctgacc
ctccatcctctcgagggggtcaagccagggtctgtgatcggctcagtggcacccccggat
gcccctgcgcgaggacagctgacctacacagtggtaggaggtggtggggatggtactttt
gtggttgacagtgtgacgggggagatttacgctgcccgggagctggactatgaagctggg
gcgcggcatgtgcttcaggtgagtgctgaggacacgcagcacggctatccgtccagccga
ctggtgctggtacagatccatgtgcaggactgcaatgaccagacacccaccttccctgag
gaccccatcaccatcgtggtgcccgagaatgcccaggctggctcatccatcttcaccttc
caggcgctggacggggatggcgtgggccccaatagccaggtgcgctacgccctgctgcac
caggagccccccggcgctcccttccacctcgacagccgctcggggctgctgacccttcgc
cagggccttgaccgggaggctgctgcctcgttcctcttggtggtggaggccatggaccag
gcccgcaacgtcagccagcgccgctcggcagctgtcacagcccgtgtgtttgtgactgat
gagaatgacaacgtgcccctgttcctctcgcctgctgctgtcaccgtcatggaggaccag
ccgacggggttcgtggtgctgcatgtggtggcccaggacaacgatttgggagagaacggg
cgtgtgagctactcattgcgagcaggcaacagtgacggccgcttccatcttaaccccagc
actggcgccctctccattgtgcgggccctgaaccgggaggaagtgatgcagcacaacctg
accgtggtggccatggatcatggtttcccacgccgctccgccacacagctgctgtccgtg
ctggtgctggatgtcaacgacgaggctcccacttttgagaaacctgagtacgaagcgcac
ataatggagaacttgccagctggcagccctgtgctgcgggtgctggccatggaccgagac
atgggtgccaatgggcaggtgtcctatgggggtctctctgggggaccgttctccatccat
ccacagacggggctcattgtcaccacacacgccttggaccgcgaggagcaggagcaacac
gtgctgatggtctacgcgcaggatggtggcctgccgcccaagctctccaaggcaaccgtg
cggataacagtgggggatgagaatgaccacgcaccacacctggaaagcgagtcttgctct
gtggaggtccctgagaaccaaagccgcgtggcactctacacactgcgggcaaccgatcct
gatggaggcgagaatgggcgcttggaataccatgtggcagatggagaccctgggcaggat
ttcagtctggacccagtctccggtgtcctctccactgcacgtgccctcgaccgggagcaa
gttgcttcctacagcctcacagtggtggtgcaagaccacggcacgcccccgcgcagtgcc
accatgtcagtgaacgtgcgggtgttggacctaaatgacaacgcgcctgactttgctcag
gccacctatgcagtggaggtgccagaggacttgcctgttggtgccctggtgctgcagctg
gcggctaaggaccccgacgagggcaccaatgggcaggtctcttactacctgggcaatgag
tcactgggcatgttccaggtcgagccacagagtgggcgcatcagaagtgcccaggcactg
gatcgggaacgccaccccagttacagctttctggccaaggctgtggactctgcaccatgg
gagcccaagagcacagccgtgcgtgtcacggtcacagtgcgagatgtcaatgaccacgct
cctgcctttctgcacagcccgctcactgtcaacttgtcccgccacacaccgctcaagcag
gtggtggccaccatgagagcagaggacagggatgcaggtgccaatgcctccatcctgtat
cgccttgccacccccaactccgccttcgcaatcaactcctacacaggggatatccaactg
ctgcagcccctgggctcgctcagccagcgccagcggacactcttcatcctggccacagac
ctggggcaaccggcgctctcctctaccggtgtggtggtgatccatttgcaggaagagccc
taccgcgggctgcgctttccccggagcaccagtgacgtggccctgccagagaacgctgcc
ccaggcaccgctgtggcgagcatccaggctgtacacacgggcggctcttctgggcgcatc
acgtacagcatcgtcagcggcaacgagaggaacgctttccttatccagcccagttcag
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