Chlamydotis macqueenii (Macqueen's bustard): 104487473
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Entry
104487473 CDS
T08437
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac03420
Nucleotide excision repair
cmac04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104487473 (DDB1)
09124 Replication and repair
03420 Nucleotide excision repair
104487473 (DDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmac04121
]
104487473 (DDB1)
03400 DNA repair and recombination proteins [BR:
cmac03400
]
104487473 (DDB1)
Ubiquitin system [BR:
cmac04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
104487473 (DDB1)
DNA repair and recombination proteins [BR:
cmac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
104487473 (DDB1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
104487473 (DDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
104487473
NCBI-ProteinID:
XP_010128753
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
DRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRENKELKAFNIRLEELQVIDVKF
LYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGA
IIIGQESITYHNGDKYLAIAPTIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEE
QMDGTVTLKDLRVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVA
METFTNLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKG
LWPLRSDPHRETDNTLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLI
QITSASVRLVSQEPKALVSEWKEPNGKNISVASCNSNQVVVAVGRALYYLEIRPQELRQI
SCTEMEHEVACLDITPLGDTNGMSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPR
SILMTTFESSHYLLCALGDGALFYFGLSLETGLLSDRKKVTLGTQPTVLRTFRSLSTTNV
FACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQK
LHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSTSK
LFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYF
IVGTAMVYPEEAEPKQGRIVVFHYSDGKLQSLAEKEVKGAVYSMVEFNGKLLASINSTVR
LYEWTAEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDF
NPNWMSAVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLSHLGEFVNVFCH
GSLVMQNLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIE
HSLYPSAAQPGARTSGCWGPAGEFGLSQ
NT seq
2965 nt
NT seq
+upstream
nt +downstream
nt
gatcgcatcggccggccctcggaaaccggcatcatcggcatcatcgacccggagtgccgg
atgattggcctgcggctctacgatggcctcttcaaggtcattcccctggaccgggagaac
aaggagttgaaggcgtttaacatccgcctggaagagctccaggtcatcgacgtgaagttc
ctctacggctgccaggctcccaccatctgctttgtctaccaggaccctcagggtcgccac
gtcaagacgtacgaggtgtccctgcgcgagaaggagtttaacaaaggtccttggaagcag
gagaacgtagaggctgaagcctccatggtcatcgcagtgccagagccttttggaggcgcg
atcatcatcgggcaggagtccatcacctatcacaacggagacaaatatctcgccatagct
cccaccatcatcaagcaaagtacgattgtgtgccacaaccgcgtggatcccaacggatcc
cgttacttgctgggggacatggaaggacgcctcttcatgctgctcctggagaaggaggag
cagatggacggcaccgtcaccttgaaggacctgcgcgtggagctgctcggcgagacgtcc
atcgcagagtgcttgacctacctggacaacggagttgtgtttgtcggctctcggctcggg
gattcccagctcgtgaagctcaacgtggacagcaacgagcagggctcctacgtcgtggct
atggagaccttcaccaacctcggtcccatcgtcgacatgtgcgtggtagacctggaaaga
caaggccaagggcagctggtgacgtgctcgggtgcgtttaaagagggttccctgcgcatc
atccggaacggcattgggattcatgagcacgctagcatcgacttgccggggattaaaggc
ttgtggcccctgaggtcggaccctcatcgtgaaacagacaacacgttggtgctctccttt
gttggccagaccagggttcttatgttaaatggggaggaagtcgaagagacggagctcacg
gggtttgtggatgaccagcagacgttcttctgcggcaacgtggcgcatcagcagttgatc
cagatcacctctgcctccgtcagactggttagtcaggagcccaaagccctggtgagcgag
tggaaagagcccaacggaaagaacatcagcgtggcttcctgtaacagtaaccaggtcgtg
gtggctgtgggacgagccttgtactacctggagatccggccccaggagctcaggcagatc
agctgcacggaaatggaacatgaagttgcctgcctggacatcacgcctctgggggacact
aacggcatgtccccgctgtgtgccatcgggctctggactgacatctctgcccgcatcctg
aagctgccttcgtttgaactgctgcacaaagagatgctgggaggagaaattatccctcgc
tccatcctgatgacgaccttcgagagcagccattaccttctgtgtgccctgggggacgga
gctctcttctactttgggctcagccttgagacaggtttgctgagcgaccgaaagaaggtg
acccttgggacccaacccaccgtccttcggactttccgctctctgtccaccaccaacgtg
tttgcctgctccgaccgccccaccgtcatctacagcagcaaccacaagctggtcttttcc
aacgtcaacctgaaggaggtgaactacatgtgtcccctcaactcggatggctatcccgac
agcttggcgttggccaataacagcaccctgacgatcggcaccattgacgagatccagaag
ctgcacatccgcacggttcccctctacgaatcgcccaggaagatctgctaccaagaggta
tcgcagtgtttcggcgtgctctcgagccgcatcgaggtgcaggatgccagcgggggcacc
actgccctcagacccagcgccagcacccaggccctgtccagcagcgtgagcaccagcaag
ctgttctccagcagcacggcaccgcacgagacgtccttcggagaggaggtggaggtgcac
aacctgctcatcatagatcagcacaccttcgaagtgcttcacgctcaccagtttctgcaa
aacgaatatgccctcagcctggtctcctgcaagcttggcaaggatcccaacacctacttc
atcgtgggcaccgccatggtgtatcccgaggaggcggagcccaaacagggccgcatcgtt
gtcttccactactctgacgggaagctgcagagcctggctgagaaggaagtcaagggagct
gtgtattccatggtggagttcaacgggaagctcttagccagcatcaacagcacggtgcgc
ctctatgagtggacggcggagaaggagctgcgcacggagtgcaaccattacaacaacatc
atggcgctctacctgaagaccaagggagacttcatcctcgtgggggatctgatgcggtcc
gtcctcctcctcgcgtacaagcccatggaaggaaacttcgaggagatcgcccgggacttc
aatccaaactggatgagtgccgtggagatcctggacgacgacaacttcttgggagcagag
aacgctttcaatttgtttgtgtgccaaaaggacagcgcggccacgaccgacgaggagcgc
cagcacttgcaggaggtggggctgtcccacttgggagagttcgtcaacgttttctgccac
gggtccctggtcatgcagaacctgggcgagacgtccacgccgacgcagggctcggttctc
ttcggcaccgtcaacggcatgatcggcctggtgacctcgctgtcggagagctggtacaac
ctcctgttggacatgcagaaccggctgaacaaagtcatcaagagcgtgggcaagatcgag
cactccttatatccttccgcagctcagccgggagcccggacctctgggtgctgggggccg
gctggtgaattcggcctgagccagc
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integrated database retrieval system
