Chlamydotis macqueenii (Macqueen's bustard): 104487743
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Entry
104487743 CDS
T08437
Name
(RefSeq) LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
cmac
Chlamydotis macqueenii (Macqueen's bustard)
Pathway
cmac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104487743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmac03041
]
104487743
Enzymes [BR:
cmac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104487743
Spliceosome [BR:
cmac03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
104487743
Complex C
U5 SnRNP specific factors
104487743
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
WHD_SNRNP200
DEAD
ResIII
Helicase_C
AAA_22
AAA_30
PhoH
SWI2_SNF2
DUF603
Hikeshi-like_C
Terminase_6N
DrmE_N
Motif
Other DBs
NCBI-GeneID:
104487743
NCBI-ProteinID:
XP_010129109
LinkDB
All DBs
Position
Unknown
AA seq
1527 aa
AA seq
DB search
QLVSVEKLPKYAQAGFEGFKTLNRIQSKLYRAALESDENLLLCAPTGAGKTNVALMCMLR
EIGKHINIDGTINVDDFKIIYIAPMRSLVQEMVGSFGKRLATYGINVAELTGDHQLCKEE
ISATQIIVCTPEKWDIITRKGGERTYTQLVRLVILDEIHLLHDDRGPVLESLVARAIRNI
EMTQEDVRLVGLSATLPNYEDVATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAIK
RFQIMNEIVYEKIMEHAGKNQVLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSAST
EVLRTEAEQCKNLELKDLLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGV
NLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYY
LSLLNQQLPIESQMVSKLPDMLNAETVLGNVQNAKDAVNWLGYTYLYIRMLRSPTLYGIS
HDDLKGDPLLDQRRLDLVHTAALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNETMQ
TYNQLLKPTLSEIELFRVFSLSSEFRNITVREEEKLELQKLLERVPIPVKESIEEPSAKI
NVLLQAFISQLKLEGFALMADMVYVTQSAGRLMRAIFEIVLNRGWAQLTDKTLNLCKMID
KRMWQSMCPLRQFKKLPEEVVKKIEKKNFPFERLYDLNHNEIGELIRMPKMGKTIHKYVH
LFPKLELSVHLQPITRSTLKVELTIAPDFQWDEKVHGSSEAFWILVEDVDSEVILHHEYF
LLXXXXXXXXXXVTFFVPVFEPLPPQYFIRVVSDRWLSCETQLPVSFRHLILPEKYPPPT
ELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSGKTIC
AEFAILRMLLQNSEGRCVYITPMEALAEQVFLDWYEKFQERLNKKVVLLTGETSTDLKLL
GKGNIIISTPEKWDILSRRWKQRKNVQNVNLFIVDEVHLIGGENGPVLEVICSRMRYISS
QIERPIRIVALSSSLSNAKDVAHWLGCSATSTFNFHPNVRPVPLELHIQGFNISHTQTRL
LSMAKPVYHAIMKHSPKKPVIVFVPSRKQTRLTAINILTTCASDVQRQRFLHCAEKDLVP
YLDKLNDNTLKETLVNGVGYLHEGLTAMERRVVEQLFSSGAVQVMVASRSLCWGMNIAAH
LVIIMDTQYYNGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLY
EPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNLQGVSHR
HLSDHLSELVEQTLSDLEQSKCISIEDEMDVAPLNLGMIAAYYYINYTTIELFSMSLNAK
TKVRGLIEIISNAAEYENIPIRHHEDNLLRQLAQKVPHKLTNPKFNDPHVKTNLLLQAHL
SRMQLSAELQSDTEEILSKAIRLIQACVDVLSSNGWWSKDSYLKQLPHFTSEHIKRCTDK
GVESVFDIMEMEDEDRNALLQLSDAQI
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
caattagtttctgtggaaaagttgcccaaatacgcccaggctggattcgagggctttaaa
acgctgaaccgtattcagagcaaactctaccgcgccgcgctggagtcggatgagaacttg
ctgctgtgcgctcccacgggtgctgggaagacgaacgtggcgctcatgtgcatgttacga
gaaatagggaagcacatcaatatcgacggaaccatcaacgtggacgatttcaagatcatc
tacatcgcgcccatgaggtccttggtgcaggagatggtgggcagctttgggaagcgcctg
gcgacctacggcatcaacgtggctgagctgacgggggatcaccagctgtgcaaggaggag
atcagcgctacccagatcatcgtctgcaccccggagaagtgggacatcatcacccgcaag
ggaggagaacgcacctacacccagctggtgcggctggtcatcctggatgagatacacctg
ctgcacgacgaccgaggacccgtcctggagtctctggtagccagagccatccgcaacatc
gagatgactcaggaggacgtgaggctcgtcggtttgagcgccaccctccccaactacgag
gacgtggctacgttcctgagagtggacccggccaaaggcttgttctattttgataacagc
ttccggccagtgcccctagagcaaacctatgtgggtattacagagaagaaagcaatcaaa
cgtttccaaataatgaatgaaattgtttatgagaagattatggagcatgctggaaagaac
caggtgctggtgttcgttcactccaggaaggagaccgggaagactgcccgggccatcagg
gatatgtgcctggagaaagacaccctgggcctcttcttgcgggagggctcggcctccacc
gaggtcctgcggaccgaagccgagcagtgcaagaacctggagctgaaggatctccttcct
tacggcttcgccattcaccacgccgggatgacgcgagtggaccggacgctggtggaggat
ctgtttgctgacaaacacattcaggtgctggtctccacagccacgctggcctggggtgta
aacctccccgctcacaccgtcatcatcaaggggacgcaggtgtacagccccgagaagggg
cgctggaccgagctgggtgctctggacatcttacagatgctggggcgtgccgggaggcct
cagtacgataccaaaggagaagggatcctcatcacctcccacggcgagctgcagtattac
ctgtccctgctcaaccagcagctccccattgaaagtcagatggtgtccaagctcccggac
atgctgaacgcggagactgtgctcggcaacgtccagaacgcaaaggacgcggtgaactgg
ctgggctacacctacctgtacatccgaatgctgcgctcccccactctctacgggatatcc
cacgatgatctgaaaggggatccgctgctggaccagcgccgcctggacctggttcacacc
gcggccctcatgttggacaagaacaacctggtgaagtacgacaagaagacggggaacttc
caggtgacagagctgggccgcatcgccagccactactacatcaccaacgagacgatgcaa
acttacaatcagctcctgaaacccaccctgagtgaaatcgagctgttccgggtcttctcg
ctgtcctcggagttcaggaacatcaccgtcagggaggaggagaagctcgagcttcaaaag
ttgctggagcgagtccccatcccagtgaaggagagcatagaggagcccagtgccaagatc
aacgtgctcctccaggccttcatctcccagctgaagctggaaggattcgctctcatggct
gacatggtgtacgttacccagtctgctgggcggctgatgcgtgccatcttcgagatcgtc
ctaaaccgtggctgggcccagctcaccgacaagaccctcaacctctgcaagatgattgac
aaacggatgtggcagtccatgtgccctttgcgccagttcaagaagctgcccgaagaagtg
gtgaagaaaattgagaagaagaatttcccgtttgaacggctctatgacttgaaccataac
gagataggggaactgatccgaatgcccaagatgggcaagacaatccacaaatacgttcat
ctctttccgaagctggagctttccgtccacttgcagcccattacccgctccaccctgaag
gtagagctcaccattgcccccgacttccagtgggatgaaaaggtccacggttcgtccgaa
gctttctggatcctggtggaggacgtggacagcgaagtgatcctgcaccacgagtacttc
ctgctgnnnnnnnnnnnnnnnnnnnnnnnnnnnnttgtcaccttcttcgtgcccgtgttc
gagccgctgcccccgcagtacttcatccgggtggtctccgaccgctggctctcctgtgag
acccagctgcccgtttccttccgccacctgatccttcctgagaagtaccctcctccgacc
gagctgctggacctgcagccgctgcccgtctcagctctgcgaaacagcgccttcgagagc
ctctaccaggacaagttccctttcttcaaccctatccagactcaggtgtttaacacggtt
tataacagcgacgacaacgtctttgtgggcgcccccacgggaagcggaaagaccatttgt
gccgaatttgccatcctgaggatgttgcttcagaactcggaggggcgctgtgtgtacatc
acccccatggaggcactggcagagcaggttttcttggactggtatgaaaaattccaggag
cgtctcaataagaaggtggttttgctgacgggggagaccagcactgacctgaagttgctg
ggtaaaggaaacatcatcatcagcacccctgagaaatgggacatcctctcacgacgctgg
aaacagcgcaagaacgtccagaatgtgaacctcttcatcgtggacgaagtgcatctcatc
gggggcgaaaatgggccggtgctggaggtcatctgctcccgaatgcgctacatctcctcc
caaatcgagcgacccatccgcatcgtggccctcagctcctccctgtccaacgccaaggac
gtggctcactggctgggctgcagcgccacctccaccttcaacttccaccccaacgtccgc
cccgtgcccctggagctgcacatccagggtttcaacatcagccacacgcagactcgcctg
ctctccatggccaagcccgtctaccacgccatcatgaagcactcgcccaaaaagcccgtg
atcgtcttcgtcccgtcccgcaagcagacgcgcctcacggccatcaacatcctcaccacc
tgcgcctccgatgtccagaggcagaggttcctgcactgtgcggagaaggatctggtgccg
tacctggacaagctgaacgacaacactctgaaagagacgctcgtgaacggagtgggctac
ctgcacgaggggctgactgccatggaacggcgagtggtggagcagcttttcagctccggc
gcggttcaggtgatggttgcctcccgcagcctctgctggggtatgaacatcgccgctcac
ttggtgatcatcatggacacgcagtactacaacggcaaaatccacgcgtacgtggattac
cccatctacgacgtgctgcagatggtgggccacgctaaccgcccgctgcaggacgacgag
ggccgttgcgtcatcatgtgccagggatccaagaaggatttcttcaagaaattcctctac
gagcccctgccggtggaatcgcacctggaccactgcatgcacgatcacttcaatgccgag
atcgtcaccaagaccatcgaaaacaagcaggatgcggtggactacctcacctggaccttc
ctgtatcgcaggatgacgcagaatccaaactactacaacctacaaggcgtgtcccacagg
cacctctcggatcacctctccgagctggtggagcagaccctgagtgacctggagcagtcc
aagtgcatcagcatcgaggatgagatggacgtggctcctctgaacctggggatgatcgcc
gcttactactacatcaactacaccaccatcgagctcttcagcatgtccctcaacgccaag
accaaggtgcgagggctgattgaaatcatctccaacgctgccgagtacgagaacattccc
atcaggcaccacgaggacaatttgctgcggcagctggcccagaaagttcctcacaagctg
accaaccccaaattcaacgatccccacgtcaagaccaacctcctgctgcaagctcacctg
tcgcgcatgcagctgagcgccgagctgcagtcggacaccgaggaaatcctcagcaaggcc
atccggctgatccaggcctgcgtggacgtgctgtccagcaacggctggtggtccaaggat
tcctacctcaagcagctgcctcacttcacctccgagcacatcaagcgctgcacggacaag
ggggtggagagcgttttcgacatcatggagatggaggacgaggaccggaacgccttgctc
cagctctcggacgcccagatc
DBGET
integrated database retrieval system
