Pacificitalea manganoxidans: CBW24_01875
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Entry
CBW24_01875 CDS
T05128
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
cmag
Pacificitalea manganoxidans
Pathway
cmag03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cmag00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CBW24_01875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmag03021
]
CBW24_01875
03400 DNA repair and recombination proteins [BR:
cmag03400
]
CBW24_01875
Enzymes [BR:
cmag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CBW24_01875
Transcription machinery [BR:
cmag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CBW24_01875
DNA repair and recombination proteins [BR:
cmag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CBW24_01875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
ATI40873
UniProt:
A0A291LVX6
LinkDB
All DBs
Position
404366..404728
Genome browser
AA seq
120 aa
AA seq
DB search
MARVTVEDCVDKVPNRFELVMLAAHRAREISSGGQLTVDRDNDKNPVVSLREIAEETQQA
DALRERMIESHQTQIEVDEPEEDSMALLMGAGAESADKPAQDDMSEEKLLRALMEAQEPK
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgtgacggttgaagactgcgttgacaaggttccgaaccggttcgaactggtg
atgctcgccgctcatcgggcgcgtgaaatttcctccggtggccaactgaccgtggatcgc
gacaacgacaagaaccccgtcgtgtccctgcgcgagattgccgaggaaacccagcaggcc
gacgccctgcgggagcgcatgatcgagagccatcagacccagatcgaggtcgacgagccc
gaagaggactcgatggccctgctcatgggtgccggtgccgaatccgccgataaaccggcg
caggacgacatgtccgaggaaaaactgctgcgcgccctgatggaagcgcaggagcccaag
taa
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