Pacificitalea manganoxidans: CBW24_02115
Help
Entry
CBW24_02115 CDS
T05128
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
cmag
Pacificitalea manganoxidans
Pathway
cmag02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cmag00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CBW24_02115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
DUF7507
GEVED
DUF6923
CshA_repeat
Motif
Other DBs
NCBI-ProteinID:
ATI40911
UniProt:
A0A291LW39
LinkDB
All DBs
Position
457399..462555
Genome browser
AA seq
1718 aa
AA seq
DB search
MTDLKMARWVRHSFSWLLAAMIVAWLGMAGSAVAQQLVFQPVGPPTVVGSGVGKRAIWRN
AGTVGGQTVDIVGVLTNTTLDHQFGTGNNQIQITSVSQDPHFADFLIYEAGTYDINSNTG
GVPVVADVFVQINDIDGPSNEQVYAQLCAGLVEYIRIDRSATTRRSFFTGTSAVGSEIFI
LSGDQNYANQPESGLEIFYPQTSVFRFGRTANSRFLVRLGNPTYEEADTLDMSCADFRAT
NLTDDVKEQELGQPVTLNILFNDSVATENNNPPANDSEAPSRYALQAIDLVPPAGAINTV
TDSSGHIVAFDMPGEGTWTYDDLTGELTFTPLIAFFGVPTPIDYRYQRPENTAGQVYSAS
ANVSIDVGAVGLLKLATLADTNLNGYADPGETIAYVFTAENFGNVTLTNVALAETQFSGQ
GVPPVITFQSATALSPQGTLEPGERAIYTATYTLVPADLDTTITNQAEVTATTPAGTPVS
DLSDSENASDGDGVAQNGPGPGRDDPTSIYAGSGPDRGDAPITYGDPEHADTSGYRIGAV
PGDGDSSAQHSADATGDDADAGGDDEAEEVFPQLYGGLTRSVAIPVGEVSPGAGRLQVFV
DFGADGTFLTPGDQVGTDLSDGGPGDLDGAVDGVITFEIAVPPTAPLVPTFARLRFSTVA
GLDAVTAAADGEVEDYAIVLKTPPDADRGDAPASYGDPQHVVEGATTLYLGTVPPDVDVL
AQSSVTADGDDLDGGDDEDGVTLPTLYAGGLAEITVQVVEPAPGTAALQAFIDFDGDGDF
AQAGDRVATNLRDGEAGDKDGTANGAITFEVAVPAGATTLPTYARFRWSTDTIDAETAFD
GEVEDYTLTISSDPPPFLCDGSLYRFDGNNAILRRLQVETSGSTYTVNTVDVGNAGNDLA
GGWGYNALDGYMYGVRPNSRRLYRVDGSGSFTNLGNISGAADARDAGDILPNGTMLYVVN
NSTWQIVDLSNPAAAASLGTLNLSSSISAEDIAYNPVDGEIYGIDQASDRIFRVSPNGGL
PGTVTPTLIGPAIYAGTFGSVWFDQDGRMYGYSNTTDNLYLIDTATGFAQLIATVAADDL
GNSEAASCRGPAPVEFGAVAGNVYEDNNASDTRDGGEPNLGGGIGITIFHDNNTPANFAD
DIEVGATDTAVDGTYGFDSLLVNSGYRILLDEADPDLGVGRTIGTSNPLLGVSVAAATTT
ENQDFGFDAAGADLSLTKYAALSGTVTPRSSAAPGDLIDWIITIENSGSGSPSGVKVIDR
IPDGYDYISDSAPATGDTYDPDTGLWFVDEILAGSSETLVVTVRMRDTGTTTNTAEIVYS
SLPDPDSDVTTGHLIDDGDDGIADDDEASYALARITGGRRLAGQIFIDNGAGGAVAHDGL
RGGTETGAQGSRLRLLDGSGAFLADPVVAGDGTWSYTLPASYSGDITVELRDQASRIPIS
ERTDGLPGLTDTDPHDGRFSFTPDSGADYLDLNLGVLPVPQLSRSQAAAIAAGQVVTLPH
RYVASSSSEVTFSVTTLSETPANGYSVALYRDPDCDGAPDTPLTAAVPVSVGEVICLVAR
VAAGGGVGPSGSFAFRLEADTSFTDTSATHQLVNVDRLGAATASGLILRKTVRNLTQNTA
EDTANSGSPGDVLAYRIHVVNATTEPVDDIEIFDRTPPYTELDSAPTSPTALSGGVSCAV
VEPATPAAGYSGHLRWTCSGALDPGAEGSVIFEVRIGD
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatctgaaaatggcgcgctgggtccgccattcgttttcgtggttgttggccgcg
atgatcgtggcatggctcggcatggccggatcggctgtggcgcagcaattggtattccag
ccggtcggtccgccaaccgtcgtcggctccggcgtgggcaagcgcgcaatctggcgcaat
gcgggcaccgtgggggggcagaccgtcgatatcgtcggggtgctcaccaacacgacgctc
gaccaccaattcggcaccggcaacaaccagatccagatcacatccgtgtctcaggatccg
cattttgcagatttcctgatctacgaggcgggcacctacgacattaacagcaacaccggc
ggtgtgccggtggtggcggatgtctttgttcagatcaacgatatcgacgggccgtccaac
gaacaggtctatgctcagctatgcgcggggcttgtcgaatacattcgcatcgaccgcagc
gccacgacccgccgatctttctttaccggcaccagcgccgtggggagcgagatttttatc
ctgtcgggggaccagaattatgccaaccagccggaatcggggttggagatcttctatcct
cagacctcggttttccggttcgggcgcacggccaattcccggtttctcgtgcgtttgggc
aaccccacctacgaggaggccgacacgctcgacatgtcctgcgcggacttccgtgcgacc
aacctgaccgacgatgtgaaggagcaggagctcggccagccggtcacgctcaacatcctg
ttcaacgattcggtcgcgaccgagaataacaacccccctgccaatgacagcgaagcgcca
agccgctatgcgctccaagccatcgatctggtgccccccgcgggggcgatcaatacggtg
accgacagttcgggccatatcgttgcgtttgatatgccgggggaggggacgtggacctat
gacgacctgacgggcgagttgacattcacaccgctgatcgcgtttttcggcgtgccgacg
ccgattgattatcgctaccaacggcctgaaaatacagccgggcaggtctattccgcctcc
gccaatgtcagcattgatgtaggggcggtcggcctgctgaaactggcgaccctcgccgat
accaatctcaacggctatgccgatcccggcgaaaccatcgcctacgtctttaccgccgag
aatttcggcaacgtgaccctgacgaatgtggcgctggcggaaacgcagttcagcgggcag
ggagtgccgccggtcatcaccttccaatccgcgacggcgctgtccccccaaggcacgttg
gagccgggggaacgggctatttatacggcgacctacacgcttgtccctgccgatctggac
acgaccattaccaaccaagcggaggtcacggccaccacccccgcaggcacgcccgtttcc
gatttgtcggacagtgaaaatgcctctgacggcgatggagttgcgcagaacgggccggga
cccgggcgcgacgacccgaccagcatctatgcgggctccggccccgaccggggcgacgcg
ccgatcacctatggcgatccggagcatgccgatacctcgggctatcgcattggcgcggtg
ccgggggatggcgacagcagcgcccagcacagcgcggatgccaccggtgacgatgccgat
gcgggcggcgacgacgaagccgaagaggtgtttccccagctatacggggggctcacccgc
agcgtcgccatcccggtgggggaggtcagccccggcgcggggcggttgcaggtgtttgtc
gatttcggtgccgacggcacgttcctcacgcccggcgatcaggtcggcacggatctcagc
gatggcggtcccggcgatctggacggagcagtggacggggtcatcaccttcgagatcgcg
gtgccgccgaccgcgccgctggtgcccacctttgcaaggcttcggttttccacggtggcc
gggctcgatgccgtgacagccgcagcggatggcgaggtcgaagattacgcaatcgtgctc
aagaccccgcccgatgcggatcgcggcgatgctccggcgagctacggtgatccgcagcac
gtcgtggaaggtgcaacaacgttgtatctgggcaccgtgccgccggatgttgatgtgctc
gcgcaatcctcggtcaccgccgatggcgatgatctggacggcggcgacgacgaggacggt
gtgacgctgcccacgctttacgcgggggggctggccgaaatcaccgtgcaggttgtcgaa
cccgcgcccggcaccgctgctctgcaggcgttcatcgatttcgacggcgacggagatttc
gcgcaggcgggggatcgcgtcgcaaccaatctccgcgatggcgaggcgggcgataaggat
ggcacagcaaacggcgcaatcaccttcgaggtggccgtgcccgcgggcgcgacgaccctg
ccgacctatgcgcgtttccgctggtccaccgatacgatcgacgccgaaaccgccttcgac
ggggaggtggaagattacacgctgacgatttccagcgatcctccgcccttcctgtgtgat
gggtcgctctaccgcttcgatggcaacaacgcgatcttgcgccgcctgcaggtggagacc
agtggatccacctacaccgtcaacactgtcgatgttggcaacgccggtaacgaccttgcc
ggggggtggggatacaatgccttggatgggtatatgtatggggtgcgtcccaacagccgc
cgtctgtatcgggtcgacggcagtggcagcttcacgaaccttggcaatatctccggcgcg
gcggatgcgcgcgacgcgggcgacatcctgcccaatgggaccatgctatatgtggtgaac
aactccacgtggcagatcgtcgatctgagcaatcccgccgcagcagccagtctgggcacg
ctcaacctcagcagttctatttcggcggaggacatcgcctataatccggtcgacggtgaa
atttacgggatcgatcaggcctcggaccggatttttcgggtctcgcccaatggcggtctg
ccgggcaccgtgacgccgacgctgatcggcccggcgatctatgcaggcacgttcggctcc
gtctggtttgatcaggacggccggatgtatggttattccaacaccaccgacaatctgtat
ctgatcgataccgcgaccggctttgcccaactgatcgcgaccgtggctgccgacgatctg
gggaatagcgaagccgcttcctgccgcgggccagcaccggtggagtttggcgctgtcgcc
gggaatgtctacgaagacaacaacgcctccgacacgcgtgacgggggggagccgaacctt
ggcggggggatcgggatcacgattttccacgacaacaacacgcccgccaatttcgccgat
gatatcgaggtgggcgcgactgatacggccgtggatggcacctatggcttcgacagtctt
ctggtgaattctggctatcggatcctgctggacgaggctgacccggacctgggtgtcggg
cgcacgatcggcacctccaacccgctgctgggggtgagcgtcgccgccgcgaccacgacc
gaaaatcaagatttcggcttcgacgcggcgggggcggacctgtcgctcacgaaatacgcc
gcgctgagcggcaccgtgaccccgcgcagttccgccgcgccgggcgacttgatcgactgg
atcatcaccattgaaaacagcgggtcgggctcgccttcgggggtgaaagtcatcgaccgc
attccagatgggtatgattacatctcggatagcgcgccggcgacgggcgacacctatgac
cccgataccgggttgtggtttgtcgatgaaatcctcgctggcagttccgagacgctggtg
gtgaccgtgcgcatgcgcgacaccggcaccaccaccaacaccgccgagatcgtgtatagc
tcgcttcctgacccggacagcgatgtgacgaccgggcatctgatcgacgatggcgacgac
gggatcgcggatgacgacgaggccagttatgcgctggcccggatcaccggcgggcggcgg
cttgcagggcagattttcatcgacaatggcgcaggcggcgcggtggcgcatgacgggctg
cgcggtggcacggaaacaggcgctcaaggcagtcgcctgcgtctgctcgacgggagcggt
gcctttctggccgatccggtcgtggccggggatggaacgtggtcttacacccttccggcc
agctatagcggggatatcacggtcgaattgcgcgatcaggccagccgcattccgatttcg
gagcgcacggatggcctgcccggcctgaccgatacggaccctcatgacgggcgttttagc
ttcaccccggacagcggcgcagattatctggaccttaatctgggtgtgctgccggtgccg
caactcagccgaagtcaggccgccgcaattgccgccgggcaggtcgtgaccctgccgcac
cgctatgtggccagttctagcagcgaagtgaccttttccgtgaccaccctgtcggaaacg
cccgccaacgggtattcggtggcgctgtaccgcgatcccgattgcgatggggccccggac
acgccgctgacggctgcggtgcccgtctccgtgggggaggtcatctgcctcgtcgcacgg
gtcgccgcgggcggtggggtcgggccgagcggtagtttcgccttcaggctggaggctgac
acaagctttacggacaccagcgcgacccaccagctggtcaatgtcgacaggcttggcgcg
gcgacggcctcgggtttgatcctgcgcaagacggtgcgcaacctgacccaaaacacggct
gaggacaccgccaatagtggcagccccggcgatgtgctggcctatcgcatccatgttgtg
aacgcgacgacggagcctgtcgacgatatcgagatctttgatcggacgccgccctatacc
gaactggattccgcaccaaccagcccgaccgcgctgtcgggtggggtcagctgcgcagtg
gtggagcctgcgacaccggcagcgggctatagcggccatctgcgctggacctgttcgggg
gcgctcgaccccggagccgaaggttcggtcatattcgaggtgcggatcggcgactga
DBGET
integrated database retrieval system